FC877830

Overview
NameFC877830
Unique NameFC877830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length920
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CLK3_MOUSE (Dual specificity protein kinase CLK3 OS=Mus musculus GN=Clk3 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 6.432e-42
Identity = 84/199 (42.21%), Postives = 132/199 (66.33%), Query Frame = 3
Query:  327 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK     CV + +WF++  H+CI FE LG + ++FL++NN++ +P+  VR +A QL   + F+H+  + HTDLKPEN+L V+SE+  + +   S          ++  K+++I+V DFGS T++
Sbjct:  285 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE--------EKSVKNTSIRVADFGSATFD 475          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CLK3_HUMAN (Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 6.432e-42
Identity = 84/199 (42.21%), Postives = 132/199 (66.33%), Query Frame = 3
Query:  327 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK     CV + +WF++  H+CI FE LG + ++FL++NN++ +P+  VR +A QL   + F+H+  + HTDLKPEN+L V+SE+  + +   S          ++  K+++I+V DFGS T++
Sbjct:  285 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE--------EKSVKNTSIRVADFGSATFD 475          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CLK3_BOVIN (Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.432e-42
Identity = 84/199 (42.21%), Postives = 132/199 (66.33%), Query Frame = 3
Query:  327 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK     CV + +WF++  H+CI FE LG + ++FL++NN++ +P+  VR +A QL   + F+H+  + HTDLKPEN+L V+SE+  + +   S          ++  K+++I+V DFGS T++
Sbjct:  137 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE--------EKSVKNTSIRVADFGSATFD 327          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CLKA_DICDI (Probable serine/threonine-protein kinase clkA OS=Dictyostelium discoideum GN=clkA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.609e-40
Identity = 86/207 (41.55%), Postives = 131/207 (63.29%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI----KVP-DYKSSSHTPKDSS--YFKRMPKSSAIKVIDFGSTTYE 917
            DD++ +Y   +GE L +RYK+   +G GTF  V+ECWD      VAIKIVR  KKY E A++EI++L+ L K      +    C+++ + F +++HIC+VF++ G SLY+FL+KN YR  P+  ++ I++QLL  I  MH L ++HTDLKPEN+LL SS +      +P  +K+S  T  ++S  ++  +  +  I VIDFG  T+E
Sbjct:  572 DDENDYYKVQVGEYLNNRYKVLCTVGSGTFSTVVECWDTNSSGQVAIKIVRSAKKYTEDALVEIDILRNLEKTGNSNGKYLSHCIRLLDSFLFKDHICLVFKRYGLSLYEFLKKNRYRPLPLSQIQNISKQLLTAIYSMHKLSLVHTDLKPENILLESSRFTYFDNSIPLQFKNSIDTTSNNSVDHYCHLVDTD-IVVIDFGGATFE 777          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CLK1_MOUSE (Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.341e-39
Identity = 86/199 (43.22%), Postives = 129/199 (64.82%), Query Frame = 3
Query:  327 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            EDD++GH +   G+ L++RY+I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI+VL+ L   D     RCVQ+  WF++R HICIVFE LG S YDF+++N++  F +D +R++A Q+ + + F+H   + HTDLKPEN+L V S+Y       + ++ PK     +R   +  IKV+DFGS TY+
Sbjct:  141 EDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKVGGRRVAVKIVKNVDRYCEAAQSEIQVLEHLNTTDPHSTFRCVQMLEWFEHRGHICIVFELLGLSTYDFIKENSFLPFRMDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVKSDY-------TEAYNPK-MKRDERTIVNPDIKVVDFGSATYD 331          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CLK1_HUMAN (Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.656e-39
Identity = 85/199 (42.71%), Postives = 127/199 (63.82%), Query Frame = 3
Query:  327 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            EDD++GH +   G+ L++RY+I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI+VL+ L   D     RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R++A Q+ + + F+H   + HTDLKPEN+L V S+Y       + ++ PK     +R   +  IKV+DFGS TY+
Sbjct:  142 EDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDY-------TEAYNPK-IKRDERTLINPDIKVVDFGSATYD 332          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: KNS1_YEAST (Dual specificity protein kinase KNS1 OS=Saccharomyces cerevisiae GN=KNS1 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.255e-37
Identity = 84/203 (41.38%), Postives = 130/203 (64.04%), Query Frame = 3
Query:  333 DKDGHYMFALGENLTS--RYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI--KVP--DYKSSSHTPKDSSYFKR-MPKSSAIKVIDFGSTTY 914
            DKDGHY++   +   S  R+ +   +G+GTFG+VL+C D + +   VA+K++R + +YREAA  E+ +LQ +  +D  G  +C+ +R  FDY+NHIC+V +  G S+YDF+  N    FP   ++ IARQL+  + F+HDL +IHTDLKPEN+L+    +I  K+P    +S S   +++S  KR + K+  IK+IDFGS  +
Sbjct:  294 DKDGHYVYQENDIFGSGGRFVVKDLLGQGTFGKVLKCIDNKYEPNYVAVKVIRAVDRYREAAKTELRILQTILNNDPQGQFQCLLLRECFDYKNHICLVTDLYGRSIYDFMCSNGIARFPGSHIQAIARQLIRSVCFLHDLGIIHTDLKPENILICDETHIAQKLPLKTVQSLSKRRREASKGKRKILKNPEIKIIDFGSAIF 496          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: POM1_SCHPO (Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.588e-32
Identity = 71/205 (34.63%), Postives = 119/205 (58.05%), Query Frame = 3
Query:  306 NGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC-VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            N S  +  DD+ G Y   LG+++  RY++   +G+G+FGQVL C D E  ++VA+KI+R  K++   A++E ++LQ++ + D     C VQ  + F +R+H+C+  E LG +LY+ ++ N ++  PI +++ I RQL++C+  +++  +IH DLKPEN+LL                           P  S +KVIDFGS+ +E
Sbjct:  673 NTSSNFGFDDERGDYKVVLGDHIAYRYEVVDFLGKGSFGQVLRCIDYETGKLVALKIIRNKKRFHMQALVETKILQKIREWDPLDEYCMVQYTDHFYFRDHLCVATELLGKNLYELIKSNGFKGLPIVVIKSITRQLIQCLTLLNEKHVIHCDLKPENILLCH-------------------------PFKSQVKVIDFGSSCFE 852          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK4_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus GN=Dyrk4 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.537e-32
Identity = 68/197 (34.52%), Postives = 115/197 (58.38%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            DD+ G YM  L +++  RY++   +G+G+FGQV +C D +  E+VA+KI+R  K++   A++E+++L+ L + DK  N   V ++++F +RNH+CI FE LG +LY+ ++ N++  F + +VR     +L+C+  ++   +IH DLKPEN++L     + V                         KVIDFGS+ YE
Sbjct:  201 DDEHGSYMKVLHDHIAYRYEVLEMIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHHQALVELKILEALRRKDKDNNHNVVHMKDFFYFRNHLCITFELLGINLYELMKNNSFHGFNLSIVRRFTFSILKCLHMLYVEKIIHCDLKPENIVLYQRGQVTV-------------------------KVIDFGSSCYE 372          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK4_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 6.034e-32
Identity = 67/197 (34.01%), Postives = 115/197 (58.38%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            DD+ G Y+  L +++  RY++   +G+G+FGQV +C D +  E+VA+KI+R  K++ + A++E+++L+ L K DK      V ++++F +RNH CI FE LG +LY+ ++ NN++ F + +VR     +L+C+  +    +IH DLKPEN++L                              +++KVIDFGS+ YE
Sbjct:   86 DDEHGFYLKVLHDHIAYRYEVLETIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHQQALMELKILEALRKKDKDNTYNVVHMKDFFYFRNHFCITFELLGINLYELMKNNNFQGFSLSIVRRFTLSVLKCLQMLSVEKIIHCDLKPENIVLYQK-------------------------GQASVKVIDFGSSCYE 257          
The following BLAST results are available for this feature:
BLAST of FC877830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
CLK3_MOUSE6.432e-4242.21Dual specificity protein kinase CLK3 OS=Mus muscul... [more]
CLK3_HUMAN6.432e-4242.21Dual specificity protein kinase CLK3 OS=Homo sapie... [more]
CLK3_BOVIN6.432e-4242.21Dual specificity protein kinase CLK3 OS=Bos taurus... [more]
CLKA_DICDI4.609e-4041.55Probable serine/threonine-protein kinase clkA OS=D... [more]
CLK1_MOUSE1.341e-3943.22Dual specificity protein kinase CLK1 OS=Mus muscul... [more]
CLK1_HUMAN6.656e-3942.71Dual specificity protein kinase CLK1 OS=Homo sapie... [more]
KNS1_YEAST1.255e-3741.38Dual specificity protein kinase KNS1 OS=Saccharomy... [more]
POM1_SCHPO1.588e-3234.63Dual specificity protein kinase pom1 OS=Schizosacc... [more]
DYRK4_MOUSE3.537e-3234.52Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK4_HUMAN6.034e-3234.01Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA53BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA53BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877830 ID=FC877830; Name=FC877830; organism=Citrus clementina; type=EST; length=920bp
AAAATTCATATCTTCGTTATTTTATTCGTTCGTTTCAATCGCATCAAGAT
CTCGATCTCTCTCTTATTTCCTCGCCGTGAGCTGCGATCATGGAGATGGA
GCGCGTGACGGAGTTTCCTTTTTCGAATCTGGATCGGCGTCCTCGTAAGC
GAGCGCGTTTGGGCTGGGACGTGCCTCAGGTACCGAAGGCTCAGGTAGGA
TTATTTTGTGGACAAGAGGTTGGGAATGTAACAAGCTTTGCACCTCCAAG
AGCTCCCTCAGACCATGTCACTAGTTCTTCTCTATTTGTAAAGGGAGTGG
CTCGAAATGGTTCTCCCCCATGGCGTGAGGATGACAAAGATGGCCATTAT
ATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATTCACAGCAA
AATGGGTGAAGGAACCTTCGGTCAGGTTTTGGAATGCTGGGATCGTGAGA
GGAAAGAAATGGTAGCCATTAAAATTGTTCGTGGGATCAAGAAATATCGT
GAGGCTGCTATGATAGAAATTGAAGTACTTCAACAACTTGCAAAACATGA
TAAAGGTGGCAACCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTA
ACCATATCTGTATTGTGTTTGAGAAGCTTGGATCTAGCTTATACGATTTT
CTACGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGAT
TGCCAGACAACTGTTGGAATGTATAGCATTTATGCATGATCTGTGTATGA
TACATACTGACTTAAAGCCTGAGAATGTTCTACTTGTTTCTTCTGAGTAT
ATTAAGGTTCCTGACTACAAGAGTTCTTCGCACACACCAAAAGATTCTTC
CTACTTTAAAAGAATGCCAAAGTCAAGTGCTATTAAGGTGATTGATTTTG
GCAGCACAACTTATGAGCGC
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