FC877830

Overview
NameFC877830
Unique NameFC877830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length920
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK2_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Mus musculus GN=Dyrk2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.643e-29
Identity = 69/197 (35.03%), Postives = 110/197 (55.84%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            DD  G Y+    +++  RY++   +G+G+FGQV++ +D +  + VA+K+VR  K++   A  EI +L+ L K DK      + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + LVR+ A  +L+C+  +H   +IH DLKPEN+LL                         +    S+IKVIDFGS+ YE
Sbjct:  202 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL-------------------------KQQGRSSIKVIDFGSSCYE 373          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK2_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Homo sapiens GN=DYRK2 PE=1 SV=3)

HSP 1 Score: 129.798 bits (325), Expect = 2.146e-29
Identity = 69/197 (35.03%), Postives = 109/197 (55.33%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            DD  G Y+    +++  RY++   +G+G+FGQV++ +D +  + VA+K+VR  K++   A  EI +L+ L K DK      + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + LVR+ A  +L+C+  +H   +IH DLKPEN+LL                         +    S IKVIDFGS+ YE
Sbjct:  204 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL-------------------------KQQGRSGIKVIDFGSSCYE 375          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: MNB_DROME (Serine/threonine-protein kinase minibrain OS=Drosophila melanogaster GN=mnb PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.803e-29
Identity = 72/196 (36.73%), Postives = 112/196 (57.14%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGST 908
            DD +  Y+   GE    RY+I S +G+G+FGQV++ +D E +  VAIKI++  K +   A IE+++L+ + + D       V+++  F +RNH+C+VFE L  +LYD LR  N+R   ++L R+ A+QL   + F+   +L +IH DLKPEN+LL +                         PK SAIK++DFGS+
Sbjct:  146 DDDNHDYIIKNGEKFLDRYEIDSLIGKGSFGQVVKAYDHEEQCHVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLSTPELNIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSS 316          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK3_RAT (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Rattus norvegicus GN=Dyrk3 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.803e-29
Identity = 69/197 (35.03%), Postives = 110/197 (55.84%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            DD DG Y+    ++L  RY++   +G+G+FGQV   +D + ++ VA+K+VR  K++   A  EI +L+ L K DK G+   + +   F +RNH+C+ FE L   LY+ ++KN ++ F + LVR+ A+ +L+ +  +H   +IH DLKPEN+LL                         +    SA KVIDFGS+ +E
Sbjct:  190 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILL-------------------------KHHGRSATKVIDFGSSCFE 361          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK3_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Mus musculus GN=Dyrk3 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.803e-29
Identity = 69/197 (35.03%), Postives = 110/197 (55.84%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            DD DG Y+    ++L  RY++   +G+G+FGQV   +D + ++ VA+K+VR  K++   A  EI +L+ L K DK G+   + +   F +RNH+C+ FE L   LY+ ++KN ++ F + LVR+ A+ +L+ +  +H   +IH DLKPEN+LL                         +    SA KVIDFGS+ +E
Sbjct:  190 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILL-------------------------KHHGRSATKVIDFGSSCFE 361          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK3_MACFA (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Macaca fascicularis GN=DYRK3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.781e-29
Identity = 69/197 (35.03%), Postives = 111/197 (56.35%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            DD DG Y+    ++L  RY++   +G+G+FGQV   +D + ++ VA+K+VR  K++   A  EI +L+ L K DK G+   + +   F +RNH+C+ FE L   LY+ ++KN ++ F + LVR+ A+ +L+ +  +H   +IH DLKPEN+LL               H  + S+           KVIDFGS+ +E
Sbjct:  171 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILL--------------KHHGRSST-----------KVIDFGSSCFE 342          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK3_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Homo sapiens GN=DYRK3 PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 4.781e-29
Identity = 69/197 (35.03%), Postives = 111/197 (56.35%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            DD DG Y+    ++L  RY++   +G+G+FGQV   +D + ++ VA+K+VR  K++   A  EI +L+ L K DK G+   + +   F +RNH+C+ FE L   LY+ ++KN ++ F + LVR+ A+ +L+ +  +H   +IH DLKPEN+LL               H  + S+           KVIDFGS+ +E
Sbjct:  191 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILL--------------KHHGRSST-----------KVIDFGSSCFE 362          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: MBK2_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis elegans GN=mbk-2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.065e-28
Identity = 70/211 (33.18%), Postives = 117/211 (55.45%), Query Frame = 3
Query:  288 VKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            V G A NG      DD++G Y   + +++  RY++   +G+G+FGQV++ +D + ++ VA+K+VR  K++   A  EI +L  L + D  G +  + + ++F++RNH CI FE L  +LY+ +++N ++ F + LVR+ A  +L C+  +    +IH DLKPENVLL                         +    S IKVIDFGS+ ++
Sbjct:  433 VIGGANNGG----YDDENGSYQLVVHDHIAYRYEVLKVIGKGSFGQVIKAFDHKYQQYVALKLVRNEKRFHRQADEEIRILDHLRRQDSDGTHNIIHMLDYFNFRNHKCITFELLSINLYELIKRNKFQGFSLMLVRKFAYSMLLCLDLLQKNRLIHCDLKPENVLL-------------------------KQQGRSGIKVIDFGSSCFD 614          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: MBK2_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis briggsae GN=mbk-2 PE=3 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.065e-28
Identity = 70/211 (33.18%), Postives = 117/211 (55.45%), Query Frame = 3
Query:  288 VKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            V G A NG      DD++G Y   + +++  RY++   +G+G+FGQV++ +D + ++ VA+K+VR  K++   A  EI +L  L + D  G +  + + ++F++RNH CI FE L  +LY+ +++N ++ F + LVR+ A  +L C+  +    +IH DLKPENVLL                         +    S IKVIDFGS+ ++
Sbjct:  432 VIGGANNGG----YDDENGSYQLVVHDHIAYRYEVLKVIGKGSFGQVIKAFDHKYQQYVALKLVRNEKRFHRQADEEIRILDHLRRQDSDGTHNIIHMLDYFNFRNHKCITFELLSINLYELIKRNKFQGFSLMLVRKFAYSMLLCLDLLQKNRLIHCDLKPENVLL-------------------------KQQGRSGIKVIDFGSSCFD 613          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK1_DICDI (Probable serine/threonine-protein kinase dyrk1 OS=Dictyostelium discoideum GN=dyrk1 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.391e-28
Identity = 70/198 (35.35%), Postives = 114/198 (57.58%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTY 914
            DD++  Y+  +GE    R++I S +G+G+FGQV++ +D   KE VAIKI++    +   A+IEI +L+ +   D     + +++++ F +RNH+CIV E L  +LYD LR  ++    ++L+++ A Q+L  + FM   ++ +IH DLKPEN+LL                         R PK SAIK+IDFGS+ +
Sbjct:  286 DDENADYIVRIGEVFVDRFEIISSLGKGSFGQVVKAFDSVLKEYVAIKIIKNKVPFYNQALIEIRLLELMNNKDPEDQYKIIKLKHHFKFRNHLCIVTELLSYNLYDLLRNTHFHGVSLNLIKKFAHQILTALFFMSTPEVDVIHCDLKPENILL-------------------------RNPKRSAIKIIDFGSSCH 458          
The following BLAST results are available for this feature:
BLAST of FC877830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
DYRK2_MOUSE1.643e-2935.03Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_HUMAN2.146e-2935.03Dual specificity tyrosine-phosphorylation-regulate... [more]
MNB_DROME2.803e-2936.73Serine/threonine-protein kinase minibrain OS=Droso... [more]
DYRK3_RAT2.803e-2935.03Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_MOUSE2.803e-2935.03Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_MACFA4.781e-2935.03Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_HUMAN4.781e-2935.03Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK2_CAEEL1.065e-2833.18Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK2_CAEBR1.065e-2833.18Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK1_DICDI1.391e-2835.35Probable serine/threonine-protein kinase dyrk1 OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA53BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA53BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877830 ID=FC877830; Name=FC877830; organism=Citrus clementina; type=EST; length=920bp
AAAATTCATATCTTCGTTATTTTATTCGTTCGTTTCAATCGCATCAAGAT
CTCGATCTCTCTCTTATTTCCTCGCCGTGAGCTGCGATCATGGAGATGGA
GCGCGTGACGGAGTTTCCTTTTTCGAATCTGGATCGGCGTCCTCGTAAGC
GAGCGCGTTTGGGCTGGGACGTGCCTCAGGTACCGAAGGCTCAGGTAGGA
TTATTTTGTGGACAAGAGGTTGGGAATGTAACAAGCTTTGCACCTCCAAG
AGCTCCCTCAGACCATGTCACTAGTTCTTCTCTATTTGTAAAGGGAGTGG
CTCGAAATGGTTCTCCCCCATGGCGTGAGGATGACAAAGATGGCCATTAT
ATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATTCACAGCAA
AATGGGTGAAGGAACCTTCGGTCAGGTTTTGGAATGCTGGGATCGTGAGA
GGAAAGAAATGGTAGCCATTAAAATTGTTCGTGGGATCAAGAAATATCGT
GAGGCTGCTATGATAGAAATTGAAGTACTTCAACAACTTGCAAAACATGA
TAAAGGTGGCAACCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTA
ACCATATCTGTATTGTGTTTGAGAAGCTTGGATCTAGCTTATACGATTTT
CTACGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGAT
TGCCAGACAACTGTTGGAATGTATAGCATTTATGCATGATCTGTGTATGA
TACATACTGACTTAAAGCCTGAGAATGTTCTACTTGTTTCTTCTGAGTAT
ATTAAGGTTCCTGACTACAAGAGTTCTTCGCACACACCAAAAGATTCTTC
CTACTTTAAAAGAATGCCAAAGTCAAGTGCTATTAAGGTGATTGATTTTG
GCAGCACAACTTATGAGCGC
back to top