FC877830

Overview
NameFC877830
Unique NameFC877830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length920
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK2_DICDI (Probable serine/threonine-protein kinase dyrk2 OS=Dictyostelium discoideum GN=dyrk2 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.178e-27
Identity = 68/197 (34.52%), Postives = 111/197 (56.35%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC-VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 917
            D+  G Y     +++  R++I S +G+G+F QV++ +D +  EMVA+KI+R  K++   A+ EI++L+ L  +D       V + N+F +RNH+ + FE L  +LYDFL+ N+++ + ++LVR    Q+L  + F+    +IH DLKPEN+LL S                         P  S IK+IDFGS+ +E
Sbjct:  587 DNDIGEYKVVERDHIAYRFEIVSILGQGSFCQVVKGYDYKTGEMVALKILRNQKRFHNQALTEIKILEYLKTNDPNSTASIVHLNNYFYFRNHLILTFELLSMNLYDFLKVNHFQGYNLNLVRRFGAQILTSLRFLSKRNIIHADLKPENILLKS-------------------------PTKSGIKLIDFGSSCFE 758          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: MBK1_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis briggsae GN=mbk-1 PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.475e-27
Identity = 72/176 (40.91%), Postives = 108/176 (61.36%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSK--MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSE--YIKVPDYKSSSHT 836
            DD++  Y+   GE    RY I S   +G+G+FGQV + +D   KE VAIKI++  K + + A IEI +L+    HDK      V ++  F +R H+C+VFE L  +LYD L+  N+R   ++L R+ A+QL + + F+   +L +IH DLKPENVLLV+++   I+V D+ SS  T
Sbjct:  347 DDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTVTKEEVAIKIIKNKKTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLLKNTNFRGVSLNLARKFAQQLGKTLLFLSSPELSIIHCDLKPENVLLVNAKRSQIRVIDFGSSCQT 522          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: MBK1_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis elegans GN=mbk-1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.700e-26
Identity = 71/176 (40.34%), Postives = 108/176 (61.36%), Query Frame = 3
Query:  330 DDKDGHYMFALGENLTSRYKIHSK--MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSE--YIKVPDYKSSSHT 836
            DD++  Y+   GE    RY I S   +G+G+FGQV + +D   KE VAIKI++  K + + A IEI +L+    HDK      V ++  F +R H+C+VFE L  +LYD L+  ++R   ++L R+ A+QL + + F+   +L +IH DLKPENVLLV+++   I+V D+ SS  T
Sbjct:  308 DDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTLNKEEVAIKIIKNKKTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLLKNTSFRGVSLNLARKFAQQLGKTLLFLSSPELSIIHCDLKPENVLLVNAKRSQIRVIDFGSSCQT 483          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: PPK15_SCHPO (Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe GN=ppk15 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.880e-25
Identity = 60/162 (37.04%), Postives = 100/162 (61.73%), Query Frame = 3
Query:  360 LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA-KHDKGGNR-CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL--VSSEYIKVPDYKSSSH 833
            LG +   +Y I   +G GTFGQV  C D + +++VAIK+++    +    ++E+ +L+ L  K+D    R  +++ + F ++NH+C+VFE L  +LY+ +++N +R   + LVR  A QLL C + +    +IH DLKPEN+LL  +SS  +KV D+ S+ H
Sbjct:  122 LGTDEGRKYLILDTLGHGTFGQVARCQDLKTQQIVAIKVIKNKPAFYNQCVMEVSILELLNNKYDPEDKRHLIRLYDQFMHKNHLCLVFELLSINLYELIKQNQFRGLHLSLVRSFATQLLSCTSLLKQARIIHCDLKPENILLQDLSSPIVKVIDFGSACH 283          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: SPK1_CAEEL (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 1.219e-24
Identity = 71/205 (34.63%), Postives = 114/205 (55.61%), Query Frame = 3
Query:  222 GNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK---HDKGGNRCVQIRNWFDYR----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLL-VSSEYIKV 809
            G+  SF  P  P + + S              P R+  + G++   +G+   +RY +  K+G G F  V   WD + K  VA+KIV+  + Y EAA+ EI++L  +     +D G ++ VQ+ + F        H+ +VFE LG +L   + ++NYR   ++ VR+I RQ+LE + +MH+ C +IHTD+KPENVL+ +S E IK+
Sbjct:  376 GHSDSFQDPMDPGEQLGSDD-------EEQEDP-RDYKRGGYHPVNIGDVFNARYHVIRKLGWGHFSTVWLAWDTQDKRFVAMKIVKSAEHYTEAALDEIKLLLSVRSADPNDIGCHKVVQLLDEFTVTGINGQHVAMVFEVLGCNLLKLIIRSNYRGLHLEQVRKICRQVLEALGYMHEKCGIIHTDIKPENVLITMSREEIKI 572          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: SPK1_CAEBR (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.715e-24
Identity = 70/205 (34.15%), Postives = 112/205 (54.63%), Query Frame = 3
Query:  222 GNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA---KHDKGGNRCVQIRNWFDYR----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLL-VSSEYIKV 809
            G+  SF  P  P + + S              P R+  + G++   +G+   SRY +  K+G G F  V   WD + K   A+KIV+  + Y EAA+ EI++L  +      D G ++ VQ+ + F        H+ +VFE LG +L   + ++NYR   ++ VR+I +Q+LE + +MH+ C +IHTD+KPENVL+ +S E IK+
Sbjct:   88 GHSDSFQDPLDPGEQLGSDD-------EEQEDP-RDYKRGGYHPVNIGDVFNSRYHVIRKLGWGHFSTVWLAWDTQEKRFTAMKIVKSAEHYTEAALDEIKLLLSVRGADPEDTGCHKVVQLLDEFTVTGINGQHVAMVFEVLGCNLLKLIIRSNYRGLHLEQVRKICKQILEALRYMHEKCGIIHTDIKPENVLITMSREEIKI 284          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: YAKA_DICDI (Probable serine/threonine-protein kinase yakA OS=Dictyostelium discoideum GN=yakA PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24
Identity = 70/225 (31.11%), Postives = 122/225 (54.22%), Query Frame = 3
Query:  276 SSLFVKGVARNGSPPWREDDKDG---HYMFALGENLTS-----RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA-KHD-KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 920
            SSL  + V  + S P   D  D     Y+  + + +T+     +YK+   +G+GTFGQV++C + +  E+VAIKI++  + Y +   +EI+ L+ L  +HD +  N  +++ + F ++ H+CIVFE L  +L++ +++NN+R    +L++    Q+L+ +  + +  +IH DLKPEN+LL                         +   S AIK+IDFGS  YE+
Sbjct:  161 SSLNPRRVLTHPSEPLSNDGYDNVNSDYIVYVNDIITNNESGQKYKVLDSLGQGTFGQVVKCKNCDTDELVAIKILKNKQAYFQQGRLEIQTLKSLNDQHDPEDKNHILRLLDSFIHKMHLCIVFELLSVNLFELIKQNNFRGLSTNLIKVFLIQILDALIVLANANIIHCDLKPENILL-------------------------QNVNSPAIKIIDFGSACYEK 360          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: SRPK1_MOUSE (Serine/threonine-protein kinase SRPK1 OS=Mus musculus GN=Srpk1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.899e-24
Identity = 64/193 (33.16%), Postives = 108/193 (55.96%), Query Frame = 3
Query:  336 KDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK---HDKGGNRCVQIRNWFDYR----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSSHTPKDSSYFKRMPK 872
            K G+++  +G+    RY +  K+G G F  V   WD + K+ VA+K+V+  + Y E A+ EI +L+ +     +D  G   VQ+ + F        HIC+VFE LG  L  ++ K+NY+  P+  V++I +Q+L+ + ++H  C +IHTD+KPEN+LL V+ +YI+       +++ S   P   S     P+
Sbjct:   64 KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNGEMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQ 256          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: SRPK3_MOUSE (Serine/threonine-protein kinase SRPK3 OS=Mus musculus GN=Srpk3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.347e-23
Identity = 69/205 (33.66%), Postives = 107/205 (52.20%), Query Frame = 3
Query:  324 REDDKD----GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR---CVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSSHTPKDSSYFKRMPKSSAI 884
            +ED KD    G+Y   +G+    RY +  K+G G F  V  CWD +RK  VA+K+V+    Y E A+ EI++L+ +   D    +    VQ+ + F        H+C+V E LG  L  ++ K+NY+  P+  V+ I RQ+L  + ++H  C +IHTD+KPEN+LL V   YI+       +++ S   P   S     P+   I
Sbjct:   54 QEDPKDYCKGGYYPVKIGDLFNGRYHVVRKLGWGHFSTVWLCWDIQRKRFVALKVVKSAGHYTETAVDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVHVCMVLEVLGHQLLKWIIKSNYQGLPVPCVKSIVRQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAYIRRLAAEATEWQQSGAQPPSRSTVSTAPQEVLI 258          
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (Serine/threonine-protein kinase SRPK1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.760e-23
Identity = 63/193 (32.64%), Postives = 109/193 (56.48%), Query Frame = 3
Query:  336 KDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYR------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSSHTPKDSSYFKRMPK 872
            K G+++  +G+    RY +  K+G G F  V   WD + K+ VA+K+V+  + Y E A+ EI +L+ +   D    NR + ++   D++       HIC+VFE LG  L  ++ K+NY+  P+  V++I +Q+L+ + ++H  C +IHTD+KPEN+LL V+ +YI+       +++ S   P   S     P+
Sbjct:   64 KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQ 256          
The following BLAST results are available for this feature:
BLAST of FC877830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
DYRK2_DICDI1.178e-2734.52Probable serine/threonine-protein kinase dyrk2 OS=... [more]
MBK1_CAEBR4.475e-2740.91Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK1_CAEEL1.700e-2640.34Dual specificity tyrosine-phosphorylation-regulate... [more]
PPK15_SCHPO1.880e-2537.04Serine/threonine-protein kinase ppk15 OS=Schizosac... [more]
SPK1_CAEEL1.219e-2434.63Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
SPK1_CAEBR2.715e-2434.15Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
YAKA_DICDI4.631e-2431.11Probable serine/threonine-protein kinase yakA OS=D... [more]
SRPK1_MOUSE7.899e-2433.16Serine/threonine-protein kinase SRPK1 OS=Mus muscu... [more]
SRPK3_MOUSE1.347e-2333.66Serine/threonine-protein kinase SRPK3 OS=Mus muscu... [more]
SRPK1_PONAB1.760e-2332.64Serine/threonine-protein kinase SRPK1 OS=Pongo abe... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA53BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA53BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877830 ID=FC877830; Name=FC877830; organism=Citrus clementina; type=EST; length=920bp
AAAATTCATATCTTCGTTATTTTATTCGTTCGTTTCAATCGCATCAAGAT
CTCGATCTCTCTCTTATTTCCTCGCCGTGAGCTGCGATCATGGAGATGGA
GCGCGTGACGGAGTTTCCTTTTTCGAATCTGGATCGGCGTCCTCGTAAGC
GAGCGCGTTTGGGCTGGGACGTGCCTCAGGTACCGAAGGCTCAGGTAGGA
TTATTTTGTGGACAAGAGGTTGGGAATGTAACAAGCTTTGCACCTCCAAG
AGCTCCCTCAGACCATGTCACTAGTTCTTCTCTATTTGTAAAGGGAGTGG
CTCGAAATGGTTCTCCCCCATGGCGTGAGGATGACAAAGATGGCCATTAT
ATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATTCACAGCAA
AATGGGTGAAGGAACCTTCGGTCAGGTTTTGGAATGCTGGGATCGTGAGA
GGAAAGAAATGGTAGCCATTAAAATTGTTCGTGGGATCAAGAAATATCGT
GAGGCTGCTATGATAGAAATTGAAGTACTTCAACAACTTGCAAAACATGA
TAAAGGTGGCAACCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTA
ACCATATCTGTATTGTGTTTGAGAAGCTTGGATCTAGCTTATACGATTTT
CTACGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGAT
TGCCAGACAACTGTTGGAATGTATAGCATTTATGCATGATCTGTGTATGA
TACATACTGACTTAAAGCCTGAGAATGTTCTACTTGTTTCTTCTGAGTAT
ATTAAGGTTCCTGACTACAAGAGTTCTTCGCACACACCAAAAGATTCTTC
CTACTTTAAAAGAATGCCAAAGTCAAGTGCTATTAAGGTGATTGATTTTG
GCAGCACAACTTATGAGCGC
back to top