FC877830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: PRP4B_PONAB (Serine/threonine-protein kinase PRP4 homolog OS=Pongo abelii GN=PRPF4B PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.434e-19 Identity = 62/200 (31.00%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 333 DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSSH------TPKDSSYFKRMPKSSAIKVIDFG 902 D +G+Y +GE L RY ++ G+G F V+ D R + VA+KI+R + ++ + E+E L++L D C+++ F ++ H+C+VFE L +L + L+K I VR ++QL + + ++H D+KP+N+L+ S+ I K+ D+ S+SH TP S F R P+ K D+G Sbjct: 670 DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARASQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYG 869
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: PRP4B_MOUSE (Serine/threonine-protein kinase PRP4 homolog OS=Mus musculus GN=Prpf4b PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.434e-19 Identity = 62/200 (31.00%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 333 DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSSH------TPKDSSYFKRMPKSSAIKVIDFG 902 D +G+Y +GE L RY ++ G+G F V+ D R + VA+KI+R + ++ + E+E L++L D C+++ F ++ H+C+VFE L +L + L+K I VR ++QL + + ++H D+KP+N+L+ S+ I K+ D+ S+SH TP S F R P+ K D+G Sbjct: 670 DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYG 869
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: PRP4B_HUMAN (Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.434e-19 Identity = 62/200 (31.00%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 333 DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSSH------TPKDSSYFKRMPKSSAIKVIDFG 902 D +G+Y +GE L RY ++ G+G F V+ D R + VA+KI+R + ++ + E+E L++L D C+++ F ++ H+C+VFE L +L + L+K I VR ++QL + + ++H D+KP+N+L+ S+ I K+ D+ S+SH TP S F R P+ K D+G Sbjct: 670 DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYG 869
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: PRP4B_BOVIN (Serine/threonine-protein kinase PRP4 homolog OS=Bos taurus GN=PRPF4B PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.434e-19 Identity = 62/200 (31.00%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 333 DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSSH------TPKDSSYFKRMPKSSAIKVIDFG 902 D +G+Y +GE L RY ++ G+G F V+ D R + VA+KI+R + ++ + E+E L++L D C+++ F ++ H+C+VFE L +L + L+K I VR ++QL + + ++H D+KP+N+L+ S+ I K+ D+ S+SH TP S F R P+ K D+G Sbjct: 671 DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYG 870
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.226e-18 Identity = 65/199 (32.66%), Postives = 107/199 (53.77%), Query Frame = 3 Query: 225 NVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLT-SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK------GGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLL 785 ++ S + P++ SD + SS + ++ G++ GE +RY + K+G G F V D VA+KIVRG K Y EAA EI++LQ++ D G N +++ + F+++ H+ +VFE LG +L ++K +R P+ V++I++QLL + +MH C +IHTD+KPENVL+ Sbjct: 106 SIQSDSGPQSDSDLDSDSS--ISSCDERNEESLKDYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 302
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: SKY1_DICDI (Probable serine/threonine-protein kinase sky1 OS=Dictyostelium discoideum GN=sky1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.907e-18 Identity = 66/198 (33.33%), Postives = 100/198 (50.51%), Query Frame = 3 Query: 312 SPPWREDDKDGHYMFALGENLTSRYKIHSKM---GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLLVSS-EYIKVPDYKSSSHTPKDSSYFKRMPKSS 878 S W +DKD + + T+ S G G G V+ + VA+KIVR + Y E A EI++L ++K++ ++ + F +R H C+VFE LG++L D ++ + YR PI LV+ + +Q L + ++H C +IHTDLKPENVLL S ++ DY S + YFK SS Sbjct: 147 STVWLCNDKDTPITTSSSSSSTTTTTTSSSSNGNGNGNGGNVIGY------KQVALKIVRSARTYSETAEDEIKILNAISKYNAQDKCVARLLDHFTHRGPNGRHYCMVFELLGNNLLDLIKHHRYRGMPITLVKTLMKQTLIALDYIHTKCKIIHTDLKPENVLLEKSFDFFTSNDYIWS----EKYGYFKNRTSSS 334
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK4_MACFA (Homeodomain-interacting protein kinase 4 OS=Macaca fascicularis GN=HIPK4 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17 Identity = 52/162 (32.10%), Postives = 86/162 (53.09%), Query Frame = 3 Query: 357 ALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE----YIKVPDYKSSS 830 A ++ T Y I +G+GTFG+V + W R EMVAIKI++ E+++L + D ++ +F +VFE L +L++F ++NN+ P +R + Q+L +A + +L +IH DLKPEN++LV +KV D+ S+S Sbjct: 2 ATTQSETDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSAS 163
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK4_RAT (Homeodomain-interacting protein kinase 4 OS=Rattus norvegicus GN=Hipk4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17 Identity = 51/156 (32.69%), Postives = 84/156 (53.85%), Query Frame = 3 Query: 375 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE----YIKVPDYKSSS 830 T Y I +G+GTFG+V + W R EMVAIKI++ E+++L+ + D ++ +F +VFE L +L++F ++NN+ P +R + Q+L +A + +L +IH DLKPEN++LV +KV D+ S+S Sbjct: 8 TDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRSRIIKNELKLLRCVRGLDPDEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSAS 163
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK4_MOUSE (Homeodomain-interacting protein kinase 4 OS=Mus musculus GN=Hipk4 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17 Identity = 51/156 (32.69%), Postives = 84/156 (53.85%), Query Frame = 3 Query: 375 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE----YIKVPDYKSSS 830 T Y I +G+GTFG+V + W R EMVAIKI++ E+++L+ + D ++ +F +VFE L +L++F ++NN+ P +R + Q+L +A + +L +IH DLKPEN++LV +KV D+ S+S Sbjct: 8 TDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRSRIIKNELKLLRCVRGLDPDEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSAS 163
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK4_HUMAN (Homeodomain-interacting protein kinase 4 OS=Homo sapiens GN=HIPK4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.352e-17 Identity = 51/156 (32.69%), Postives = 83/156 (53.21%), Query Frame = 3 Query: 375 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE----YIKVPDYKSSS 830 T Y I +G+GTFG+V + W R EMVAIKI++ E+++L + D ++ +F +VFE L +L++F ++NN+ P +R + Q+L +A + +L +IH DLKPEN++LV +KV D+ S+S Sbjct: 8 TDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSAS 163 The following BLAST results are available for this feature:
BLAST of FC877830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877830 ID=FC877830; Name=FC877830; organism=Citrus clementina; type=EST; length=920bpback to top |