FC877830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CDK4_BOVIN (Cell division protein kinase 4 OS=Bos taurus GN=CDK4 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11 Identity = 45/159 (28.30%), Postives = 76/159 (47.80%), Query Frame = 3 Query: 375 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-----------GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 818 TSRY+ +++G G +G V + D VA+K VR I RE A++ + + + C R D + +VFE + L +L K P++ ++++ RQ L + F+H C++H DLKPEN+L+ S +K+ D+ Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGAGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATART--DRETKVTLVFEHVDQDLRTYLDKAPPPGLPVETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 159
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: Y8078_DICDI (Probable serine/threonine-protein kinase DDB_G0268078 OS=Dictyostelium discoideum GN=DDB_G0268078 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11 Identity = 47/148 (31.76%), Postives = 84/148 (56.76%), Query Frame = 3 Query: 381 RYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI-EIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 818 +Y+ ++G+G +G V++ D + E+VAIK + + ++E + EI+ L++L KH V++ R+ + VFE L ++LY+ + K+ + P +R I Q+L+ + FMH H DLKPEN++LV E +K+ D+ Sbjct: 3 KYQFIKQVGDGAYGDVIKAIDVKTGEIVAIKRMKKKFSDWKECIQLREIKALKKL-KHPN----IVKLLEIILERDELFFVFEYLENNLYESI-KDRTKLLPETTIRNIIYQILQALHFMHTNGFFHRDLKPENIMLV-GERLKIADF 143
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CDKL5_MOUSE (Cyclin-dependent kinase-like 5 OS=Mus musculus GN=Cdkl5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11 Identity = 41/153 (26.80%), Postives = 87/153 (56.86%), Query Frame = 3 Query: 369 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 818 N+ ++++I +GEG +G VL+C +E E+VAIK + ++ +E + E+++L+ L + + V+++ F R + +VFE + ++ + L + P + V+ QL++ I + H ++H D+KPEN+L+ ++ +K+ D+ Sbjct: 8 NVMNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQEN-----IVELKEAFRRRGKLYLVFEYVEKNMLELLEEMP-NGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDF 154
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CDKL5_HUMAN (Cyclin-dependent kinase-like 5 OS=Homo sapiens GN=CDKL5 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11 Identity = 41/153 (26.80%), Postives = 87/153 (56.86%), Query Frame = 3 Query: 369 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 818 N+ ++++I +GEG +G VL+C +E E+VAIK + ++ +E + E+++L+ L + + V+++ F R + +VFE + ++ + L + P + V+ QL++ I + H ++H D+KPEN+L+ ++ +K+ D+ Sbjct: 8 NVMNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQEN-----IVELKEAFRRRGKLYLVFEYVEKNMLELLEEMP-NGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDF 154
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSJ (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11 Identity = 44/155 (28.39%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 366 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 818 + + RY +GEGT+G V + D + VAIK +R + KY+E A+ EI++L++L + +++ + F Y+ ++ +VFE + + L +R N P D + + +L+ +AF H ++H D+KP N+L+ + +K+ D+ Sbjct: 13 KRVADRYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIR-LGKYKEGVNFTALREIKLLKELKD-----SNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPAD-TKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIGADGQLKLADF 160
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSI (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica GN=CDKD-1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11 Identity = 44/155 (28.39%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 366 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 818 + + RY +GEGT+G V + D + VAIK +R + KY+E A+ EI++L++L + +++ + F Y+ ++ +VFE + + L +R N P D + + +L+ +AF H ++H D+KP N+L+ + +K+ D+ Sbjct: 13 KRVADRYLKREVLGEGTYGVVFKADDTKTGNTVAIKKIR-LGKYKEGVNFTALREIKLLKELKD-----SNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPAD-TKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIGADGQLKLADF 160
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: MYLK2_RAT (Myosin light chain kinase 2, skeletal/cardiac muscle OS=Rattus norvegicus GN=Mylk2 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11 Identity = 45/156 (28.85%), Postives = 86/156 (55.13%), Query Frame = 3 Query: 369 NLTSRYKIHSK--MGEGTFGQVLECWDRERKEMVAIKIVRG-IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS--EYIKVPDY 818 N++S + ++SK +G G FG V C +R +A K+++ K +E ++EIEV+ QL + +Q+ + + + I + E + G L++ + +Y+ +D + RQ+ + I FMH + ++H DLKPEN+L V++ +K+ D+ Sbjct: 292 NVSSEFSMNSKEALGGGKFGAVCTCTERSTGLKLAAKVIKKQTPKDKEMVLLEIEVMNQLNHRN-----LIQLYSAIETSHEIILFMEYIEGGELFERIVDEDYQLTEVDTM-VFVRQICDGILFMHKMRVLHLDLKPENILCVNTTGHLVKIIDF 441
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CDK4_XENLA (Cell division protein kinase 4 OS=Xenopus laevis GN=cdk4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11 Identity = 42/161 (26.09%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 360 LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE---AAMIEIEVLQQLAKHD-----KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 818 + + + +Y+ +++G G +G V + D + + VA+K VR + + E+ +L++L D K + C R D + +VFE + L +L K P++ ++++ +Q L + F+H C++H DLKPEN+L+ S +K+ D+ Sbjct: 1 MSKEMKGQYEPVAEIGVGAYGTVYKARDLQSGKFVALKNVRVQTNENGLPLSTVREVTLLKRLEHFDHPNIVKLMDVCASART--DRETKVTLVFEHVDQDLKTYLSKVPPPGLPLETIKDLMKQFLSGLEFLHLNCIVHRDLKPENILVTSGGQVKLADF 159
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11 Identity = 45/152 (29.61%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 378 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA-----KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 818 +RY+ ++GEGT+G V + WD VA+K IK+ RE I + ++++A KH V + + + + +VFE LY F+ +++ PI+ R I Q+L+ +AF H ++H D+KP+N+L+ + IK+ ++ Sbjct: 2 TRYEKKQQLGEGTYGVVCKAWDTVCNRYVALK---KIKQEREDDGIPVTSVREIAVLLELKHPN----VVDLYDIYLEDKFLYLVFEFCDEDLYQFMSRSS--KIPINETRSIVYQILQGLAFCHYHQILHRDMKPQNILINKNGTIKLGEF 144
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: CDK4_RAT (Cell division protein kinase 4 OS=Rattus norvegicus GN=Cdk4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11 Identity = 43/159 (27.04%), Postives = 78/159 (49.06%), Query Frame = 3 Query: 375 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-----------GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 818 T+RY+ +++G G +G V + D VA+K VR + RE A++ + + + C R D + + +VFE + L +L K P++ ++++ RQ L + F+H C++H DLKPEN+L+ S+ +K+ D+ Sbjct: 3 TTRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGAAGGGLPVSTVREVALLRRLEAFEHPNVVRLMDVCATSRTDRDIK--VTLVFEHIDQDLRTYLDKAPPPGLPVETIKDLMRQFLSGLDFLHANCIVHRDLKPENILVTSNGTVKLADF 159 The following BLAST results are available for this feature:
BLAST of FC877830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877830 ID=FC877830; Name=FC877830; organism=Citrus clementina; type=EST; length=920bpback to top |