FC877834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR1_SCHPO (ATP-binding cassette transporter pdr1 OS=Schizosaccharomyces pombe GN=pdr1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.236e-13 Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +SG ++ +TA+LG + S K+ L+ ++ R ++G +TL+G L K I YV ++ L S T+ ETL A R + S ++ V+ +ID LGL A I+GD +L LDEP +GLD SA+ +V +L+++A+SG ++ Sbjct: 780 VSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEITLSGLKNPKNLRKRIG-YVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEYVIDFLGLGEVADFIVGDMGKGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLARSGLSIL 953
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: YXLF_BACSU (Uncharacterized ABC transporter ATP-binding protein yxlF OS=Bacillus subtilis GN=yxlF PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.405e-12 Identity = 52/174 (29.89%), Postives = 85/174 (48.85%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIV 918 +S E E A+LG +G+ KTT + +AG +S GT+ L GE KL + + Y+ Q YS +T E L F+ LSK K ++++ +++ +GL AA IG ++H P L LDEP+S LD T F V+ +++++ K +++ Sbjct: 20 VSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPT--SGTIKLLGE---KKLDRRLIGYLPQYPAFYSWMTANEFLTFAGRLS---GLSKRKCQEKIGEMLEFVGLHEAAHKRIGGYSGGMKQRLGLAQA-----LLHKPKFLILDEPVSALDPTGRFEVLDMMRELKKHMAVL 180 The following BLAST results are available for this feature:
BLAST of FC877834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877834 ID=FC877834; Name=FC877834; organism=Citrus clementina; type=EST; length=923bpback to top |