FC877834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 2.468e-25 Identity = 78/247 (31.58%), Postives = 128/247 (51.82%), Query Frame = 1 Query: 208 SSVISIDMPYSNGSS-------SNELPNYP--LLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 SS + + +P S G++ SN+L + +LSF+N+ Y VK+ LP I+G+ + G + AILG +G K++L+D +A R L G V +NG + K S YV+QDD++ LT+ E L FSA RL +++ +K +R++ +I +LGL A + +G + ++I DP +LFLDEP +GLD ++A V+ +LK+++K G +I Sbjct: 3 SSNVEVFIPVSQGNTNGFPATASNDLKAFTEGAVLSFHNICYRVKLKSGFLP--------CRKPVEKEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLINGAPRPANF-KCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTII 239
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB7G_ARATH (ABC transporter G family member 7 OS=Arabidopsis thaliana GN=ABCG7 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.468e-25 Identity = 67/178 (37.64%), Postives = 107/178 (60.11%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRIS---KQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +SG A+ G + AI+G SGS KTTL++ +AG++S + L G + +NG+ SK K+ A+V Q+DL +S LT+ ETL F+AE +LP S E++ + V+ L+ +LGL S A + +GD + ++I P ++F DEP +GLD A V++ L+++A+ G VI Sbjct: 94 VSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSLSPRLHLSGLLEVNGKPSSSKAYKL--AFVRQEDLFFSQLTVRETLSFAAELQLPEISSAEERDEYVNNLLLKLGLVSCADSCVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAFQAEKVMETLQKLAQDGHTVI 269
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25 Identity = 70/214 (32.71%), Postives = 115/214 (53.74%), Query Frame = 1 Query: 280 LLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +LSF++++Y VKV L I+G+ + G + AILG +G K++L+D +A R + L G V +NG + K S YV+QDD++ LT+ E L FSA RLP+++ +K +R++ +I +LGL A + +G + ++I DP +LFLDEP +GLD ++A V+ +LK+++K G +I Sbjct: 36 VLSFHHITYRVKVKSGFL---------VRKTAEKEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPRGLSGDVLINGAPQPANF-KCSSGYVVQDDVVMGTLTVRENLQFSAALRLPKAMKTHEKNERINTIIKELGLDKVADSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTII 238
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.225e-24 Identity = 70/214 (32.71%), Postives = 114/214 (53.27%), Query Frame = 1 Query: 280 LLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +LSF++++Y VKV L I+G+ + G + AILG +G K++L+D +A R + L G V +NG + K S YV+QDD++ LT+ E L FSA RLP ++ +K +R++ +I +LGL A + +G + ++I DP +LFLDEP +GLD ++A V+ +LK+++K G +I Sbjct: 36 VLSFHHITYRVKVKSGFL---------VRKTVEKEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPKGLSGDVLINGAPQPAHF-KCCSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINTIIKELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTII 238
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.225e-24 Identity = 67/172 (38.95%), Postives = 102/172 (59.30%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLK-GTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSG 909 ++G A G I AI+G SGS K+TL+D++AGR+++ + G + LNG+ ++L + AYV Q+D+L LT+ ET+ +SA RL L+KE+ V+ I +LGL+ A +IG+ +I+ P +LFLDEP SGLD SAF V++ L+ IA+ G Sbjct: 48 LNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGNLLLNGKK--ARLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDG 217
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.600e-24 Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKII----SAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 ++G I AI+G SGS K+TL+DA+AGR++ G V ++G+VL + + + +AYV Q+D+L LT+ E++ +SA RLP L++E+ V+A I +GL + IG+ +++ P LLFLDEP SGLD SAF VV++L+ IA SG V+ Sbjct: 34 VNGCGEPNRILAIMGPSGSGKSTLLDALAGRLA-----GNVVMSGKVLVNGKKRRLDFGAAAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIGNWHLRGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQILRNIASSGKTVV 207
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.090e-24 Identity = 65/177 (36.72%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIG--DEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 I+G G I AI+G SG+ KTTL+D +A R++ GT+ LNG + K + YV Q D L LT+ ETL F A+ ++PR + ++K +RV +ID++GL A T++G D + +++ P ++ LDEP SGLD +++F V+ LK++AKSG +I Sbjct: 142 INGHIESGTIFAIMGPSGAGKTTLLDILAHRLNING-SGTMYLNGNKSDFNIFKKLCGYVTQSDSLMPSLTVRETLNFYAQLKMPRDVPLKEKLQRVQDIIDEMGLNRCADTLVGTADNKIRGISGGERRRVTISIELLTGPSVILLDEPTSGLDASTSFYVMSALKKLAKSGRTII 317
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.729e-24 Identity = 65/166 (39.16%), Postives = 99/166 (59.64%), Query Frame = 1 Query: 409 AREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKS 906 A+ EI AI+G SG+ K++L++ +A R+ Q G+V +N + K IS YV Q D L+ +LT+EETL+FSA+ RL L ++ R RV +L+ +LGL + A +GD+ ++IHDP +L LDEP SGLD TSA ++ +LK +A++ Sbjct: 70 AKPWEILAIVGPSGAGKSSLLEILAARLIPQT--GSVYVNKRPVDRANFKKISGYVTQKDTLFPLLTVEETLLFSAKLRL--KLPADELRSRVKSLVHELGLEAVATARVGDDSVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALLIIDMLKHMAET 231
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.729e-24 Identity = 65/220 (29.55%), Postives = 119/220 (54.09%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL ++F+N++Y V + +++ SQ +SGV G +TA++G+SG+ KTTLMD +AGR + +G + ++G + IS YV Q+D+ +T+EE+L FSA RLP+ ++KE+K++ V+ ++ + L + ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 819 LPFKPLTMTFHNVNYYVDMPKEMR-------SQGVPETRLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYTEGDIRISGHPKEQQTFARISGYVEQNDIHSPQVTVEESLWFSASLRLPKEITKEQKKEFVEQVMRLVELDTLRYALVGLPGTTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1031 HSP 2 Score: 73.9442 bits (180), Expect = 1.405e-12 Identity = 56/198 (28.28%), Postives = 87/198 (43.94%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLK-GTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAE--------------------------------FRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLK 891 ISG+ + G +T +LG GS K+TL+ A+AG++ K K G +T NGE L +K SAY+ Q D + LT+ ETL F+A F S+ EK D ++ LGL + T++G++ + LF+DE +GLD ++ F +VK ++ Sbjct: 179 ISGIIKPGRMTLLLGPPGSGKSTLLLALAGKLDKSLKKTGNITYNGENLNKFHVKRTSAYISQTDNHIAELTVRETLDFAARCQGASEGFAGYMKDLTRLEKERGIRPSSEIDAFMKAASVKGEKHSVSTDYVLKVLGLDVCSDTMVGNDMMRGVSGGQRKRVTTGEMTVGPRKTLFMDEISTGLDSSTTFQIVKCIR 376
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ADP1_YEAST (Probable ATP-dependent permease OS=Saccharomyces cerevisiae GN=ADP1 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.564e-24 Identity = 70/206 (33.98%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 283 LSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIA 900 LSF N++YSV P + G + ISG+ + G+I AI+G SG+ KTTL+D +A + + G++ +NG + K I +V QDD L LT+ ET++ SA RLP++LS E K+ RV ++++L + IIG+E +++ P++LFLDEP SGLD ++A NV++ L +++ Sbjct: 384 LSFENITYSV-------PSINSDGVEETVLNE------ISGIVKPGQILAIMGGSGAGKTTLLDILAMKRKTGHVSGSIKVNGISMDRKSFSKIIGFVDQDDFLLPTLTVFETVLNSALLRLPKALSFEAKKARVYKVLEELRIIDIKDRIIGNEFDRGISGGEKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLS 576 The following BLAST results are available for this feature:
BLAST of FC877834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877834 ID=FC877834; Name=FC877834; organism=Citrus clementina; type=EST; length=923bpback to top |