FC877834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCGM_DICDI (ABC transporter G family member 22 OS=Dictyostelium discoideum GN=abcG22 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.655e-24 Identity = 68/220 (30.91%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 277 LLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXX-----DIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 L ++F +L+YSV V +K + L +SG GE+ A+ G SGS KTTL+D +A R + G V +NG + ++ S YV+Q+D+L +T+ ETL F A+ +LP+S ++++K +R++ +++Q+GL A IG ++ P ++ LDEP SGLD TSA V+K L ++ + S+ + Sbjct: 29 LTITFKDLAYSVTVKKKKMQILK----------------GVSGTVTPGELVAVFGPSGSGKTTLLDILANRKESGEISGAVLINGNEIDDDYKRLCS-YVVQEDVLLPTITVRETLRFYADLKLPKSWTEKEKHERIEQILEQIGLSHRADAKIGGVLPGGIVLRGLSGGEKRRVSIGCGLVTSPSIVLLDEPTSGLDTTSAMAVMKTLVELTQQKSVTV 231
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.655e-24 Identity = 72/214 (33.64%), Postives = 113/214 (52.80%), Query Frame = 1 Query: 280 LLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +LSF+N+ Y VKV L I+GV + G + AILG +G K++L+D +A R L G V +NG + K S YV+QDD++ LT+ E L FSA RLP +++ +K +R++ +I +LGL A + +G + ++I DP +LFLDEP +GLD ++A V+ +LK+++K G +I Sbjct: 35 VLSFHNICYRVKVKTGFL--------LCRKTIEKEILANINGVMKPG-LNAILGPTGGGKSSLLDILAARKDPHGLSGDVLINGAPRPANF-KCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTII 238
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB24G_ARATH (ABC transporter G family member 24 OS=Arabidopsis thaliana GN=ABCG24 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.941e-24 Identity = 60/171 (35.09%), Postives = 98/171 (57.31%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSG 909 ++G + G ITA++G SG+ KT+L+ A+AG+ +L G + +NG+ K I +V QDD+++ LT+EE L F A+ RLP LSK K V+ +ID LGL++ +++G + +++ +P +LFLDEP SGLD S+ +++ L+ A G Sbjct: 497 VTGSMKPGRITAVMGPSGAGKTSLLSALAGKAVGCKLSGLILINGKQESIHSYKKIIGFVPQDDVVHGNLTVEENLWFHAKCRLPADLSKADKVLVVERIIDSLGLQAVRSSLVGTVEKRGISGGQRKRVNVGLEMVMEPSVLFLDEPTSGLDSASSQLLLRALRHEALEG 667
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.941e-24 Identity = 63/176 (35.80%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIA-KSGSIVI 921 +S AR EITAI G SG+ KTTL++ +AG++S ++ G V +NG + + +S +V Q+D L+ LT++ETL +SA RL ++ +V LI +LGL A + IG +++HDP ++ +DEP SGLD SA VV +LK + K G ++ Sbjct: 54 VSCDARSAEITAIAGPSGAGKTTLLEILAGKVSHGKVSGQVLVNGRPMDGPEYRRVSGFVPQEDALFPFLTVQETLTYSALLRL--KTKRKDAAAKVKRLIQELGLEHVADSRIGQGSRSGISGGERRRVSIGVELVHDPNVILIDEPTSGLDSASALQVVTLLKDMTIKQGKTIV 227
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCGI_DICDI (ABC transporter G family member 18 OS=Dictyostelium discoideum GN=abcG18 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.769e-23 Identity = 64/175 (36.57%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 I+G + G + A++G SG+ K+TL+D +A R + KG + +NG+ +K SAYV Q D+L + T+ E ++FSA+ RLP S+ ++K + VD +++ L L ++IGD + ++ DP LLFLDEP SGLD ++A V+ ++K+IA SG VI Sbjct: 834 INGYVKPGMLVALMGPSGAGKSTLLDVLANRKTGGHTKGQILINGQER-TKYFTRTSAYVEQMDILTPVSTVREVILFSAKNRLPNSVPIQEKEEFVDNILETLNLLKIQHSLIGDVE-SGLSLSQRKRVNMGIELASDPQLLFLDEPTSGLDSSAALKVMNLIKKIASSGRSVI 1006 HSP 2 Score: 80.4925 bits (197), Expect = 1.501e-14 Identity = 64/231 (27.71%), Postives = 111/231 (48.05%), Query Frame = 1 Query: 220 SID--MPYSNGSSSN--ELPNYPLLLSFNNLSYSVKVGQ---KLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLK 891 SID + +S SS N LP + +S NLS +V G+ K+L DL FF + G + +LG+ G KT+LM+ +A S +++ G + NG+ +YV+QDD + LT+ +T FSA+ + S++++ + VD ++D L L+ T++GDE +++ + LL +DEP +GLD + + ++ +K Sbjct: 44 SIDGGLNFSTTSSYNPSNLPRTSVFVSARNLSSTVGHGKNEKKILTDLNFF-------------------LKPGSMVLLLGSPGCGKTSLMNTLALLTSNEKITGNLLFNGKTGDPNTHHRHVSYVVQDDFHMAPLTVRDTFKFSADCQ-SGDKSEKERIEIVDNVLDFLDLKHVQNTVVGDEFLRGISGGQKKRVTIGVELVKESNLLLMDEPTNGLDSSISLEMLTKIK 254
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCGF_DICDI (ABC transporter G family member 15 OS=Dictyostelium discoideum GN=abcG15 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.310e-23 Identity = 74/241 (30.71%), Postives = 127/241 (52.70%), Query Frame = 1 Query: 199 NDYSSVISIDMPYSNGSSSNELPNYPLLLSFNNLSYSVKVG---QKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGD-EQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSG 909 N+ + + +N S +P L ++ ++ YSV +G KLL D I G + G++TA++G+SG+ KTTL+D +A R + +++GT LNG+ L + I+ YV Q D+L LT+ ETL FSA+ R ++S E+K K V+ +++ + ++ +IGD E +++ P +LFLDEP SGLD S++N++K ++++A +G Sbjct: 816 NEKQQNLLVQQATNNMKESLSMPGG--LFTWQHMYYSVPIGGNTMKLLLD------------------DIQGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTTGQVQGTTLLNGKPLEIDFER-ITGYVEQMDVLNPALTVRETLRFSAKLRGEPTISLEEKFKYVEQVLEMMEMKHLGDALIGDLETGVGISVEERKRTTIGVELVAKPHILFLDEPTSGLDAQSSYNIIKFIRKLADAG 1035
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.017e-23 Identity = 71/178 (39.89%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 400 SGVAREGEITAILGASGSSKTTLMDAIAGRISK--QRLKGTVT-LNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIG-DEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 SGVA GE+ A++G+SG+ KTTL++A A R SK Q T+ LNG + +K ++ AYV QDDL LT E L+F A R+PR +++++K +RVD +I L L T+IG + + + DP LL DEP SGLD A +VV+VLK++++ G VI Sbjct: 108 SGVAYPGELLAVMGSSGAGKTTLLNASAFRSSKGVQISPSTIRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHMTQKQKVQRVDQVIQDLSLGKCQNTLIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAHSVVQVLKKLSQKGKTVI 285
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.017e-23 Identity = 67/235 (28.51%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 241 NGSSSNE--------LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 NGS S LP PL +SF+N++Y V + +++ Q ++GV R G +TA++G SG+ KTTLMD +AGR + ++G + ++G + IS Y Q+D+ +T++E+L++SA RLP+ ++K +K + VD +++ + L S ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 792 NGSKSKSIDVKRGMVLPFTPLTMSFDNVNYYVDMPKEMK-------EQGVSKDKLQLLKEVTGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKRQETFARISGYCEQNDIHSPQVTVKESLIYSAFLRLPKEVTKYEKMRFVDEVMELVELESLKDAVVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1019
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: WHITE_DROME (Protein white OS=Drosophila melanogaster GN=w PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.941e-23 Identity = 70/180 (38.89%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLK----GTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIG-DEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 + GVA GE+ A++G+SG+ KTTL++A+A R S Q ++ G LNG+ + +K ++ AYV QDDL LT E L+F A R+PR L+ ++ RVD +I +L L TIIG + + + DP LL DEP SGLD +A +VV+VLK++++ G VI Sbjct: 116 VCGVAYPGELLAVMGSSGAGKTTLLNALAFR-SPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVI 294
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23 Identity = 66/221 (29.86%), Postives = 113/221 (51.13%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPF-FGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL +SFN ++Y V D+P SQ ISG R G +TA++G SG+ KTTLMD ++GR + ++G + ++G IS Y Q+D+ +T+ E+L+FSA RLP+ ++ ++K+ VD +++ + L I+G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 901 LPFEPLYMSFNEINYYV--------DMPLEMKSQGVTADKLQLLSGISGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIEGEIYISGYPKNQATFARISGYCEQNDIHSPQITVRESLLFSAFLRLPKEVNDQEKKIFVDEVMELVELTGLKDAIVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVV 1113 HSP 2 Score: 75.485 bits (184), Expect = 4.829e-13 Identity = 54/205 (26.34%), Postives = 95/205 (46.34%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAE-------FRLPRSLSKEKKR----------------------KRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +SG+ R +T +LG S KTTL+ A+AG++ G VT NG L + + +AY+ Q D+ +T++ETL FSA+ + L + L+K++++ + D ++ LGL A I+GDE ++ +LF+DE +GLD ++ F +++ ++QI G + Sbjct: 215 VSGIVRPSRMTLLLGPPSSGKTTLLLALAGKLDPTLETSGEVTYNGYGLDEFVPQKTAAYISQHDVHAGEMTVKETLDFSAKCQGVGQRYELLKELAKKERQLGIYPDPEVDLFMKATSVEGSTLQTDYILRILGLDMCADVIVGDELRRGISGGQKKRLTTAEMLVGPTKVLFMDEISTGLDSSTTFQIIRCIQQIVHMGEATV 419 The following BLAST results are available for this feature:
BLAST of FC877834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877834 ID=FC877834; Name=FC877834; organism=Citrus clementina; type=EST; length=923bpback to top |