FC877834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23 Identity = 61/220 (27.73%), Postives = 116/220 (52.73%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL ++F+N++Y V + +++ ++ +SG+ R +TA++GASGS KTTLMD +AGR + ++G + ++G + I+ YV Q+D+ +T+EE+L FS+ RLP +S+E + V+ ++ + L ++G + +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 831 LPFQPLTMTFHNVNYYVNMPKEMQ-------AKGVPEKRLQLLSEVSGIFRPRVLTALVGASGSGKTTLMDVLAGRKTGGYIEGDIRISGHKKEQRTFARIAGYVEQNDIHSPQVTVEESLWFSSTLRLPNDISRETRHAFVEEVMALVELDQIRYALVGKQGLTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1043
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: WHITE_LUCCU (Protein white OS=Lucilia cuprina GN=W PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 8.779e-23 Identity = 69/179 (38.55%), Postives = 104/179 (58.10%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISK--QRLKGTVT-LNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIG-DEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 + GVA GE+ A++G+SG+ KTTL++A+A R ++ Q +V LNG + +K ++ AYV QDDL LT E L+F A R+PR++++++K +RVD +I L L TIIG + + + DP LL DEP SGLD A +VV+VLK++++ G VI Sbjct: 105 VCGVAYPGELLAVMGSSGAGKTTLLNALAFRSARGVQISPSSVRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQATVRMPRTMTQKQKLQRVDQVIQDLSLIKCQNTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAASVVQVLKKLSQRGKTVI 283
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.779e-23 Identity = 62/220 (28.18%), Postives = 115/220 (52.27%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL LSF+N+ YSV + Q++ +Q +SG R G +TA++G SG+ KTTLMD +AGR + ++G++ ++G + +S Y Q+D+ +T+ E+L+FSA RLP + ++ ++ +++ + L+S ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 853 LPFTPLSLSFDNVRYSVDMPQEMK-------AQGVADDRLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKKQETFARVSGYCEQNDIHSPQVTVYESLLFSAWLRLPEDVDSNTRKMFIEEVMELVELKSLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVV 1065 HSP 2 Score: 77.0258 bits (188), Expect = 1.660e-13 Identity = 57/198 (28.79%), Postives = 89/198 (44.95%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSA-------EFRLPRSLSKEKKRKRV------------------------DALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQ 894 +SG+ + +T +LG GS KTTL+ A+AGR+ K + G VT NG + + + +AY+ Q DL +T+ ETL FSA F + LS+ +K + D ++ LGL A T++GDE ++ LF+DE +GLD ++ F +V L+Q Sbjct: 183 VSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLGKDLKASGKVTYNGHGMEEFVPERTAAYISQHDLHIGEMTVRETLAFSARCQGVGSRFDMLTELSRREKAANIKPDADIDAFMKAAAMGGQEANVNTDYILKILGLEICADTMVGDEMLRGISGGQRKRVTTGEMLVGPARALFMDEISTGLDSSTTFQIVNSLRQ 380
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.779e-23 Identity = 62/220 (28.18%), Postives = 115/220 (52.27%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL LSF+N+ YSV + Q++ +Q +SG R G +TA++G SG+ KTTLMD +AGR + ++G++ ++G + +S Y Q+D+ +T+ E+L+FSA RLP + ++ ++ +++ + L+S ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 853 LPFTPLSLSFDNVRYSVDMPQEMK-------AQGVADDRLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKKQETFARVSGYCEQNDIHSPQVTVYESLLFSAWLRLPEDVDSNTRKMFIEEVMELVELKSLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVV 1065 HSP 2 Score: 77.0258 bits (188), Expect = 1.660e-13 Identity = 57/198 (28.79%), Postives = 89/198 (44.95%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSA-------EFRLPRSLSKEKKRKRV------------------------DALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQ 894 +SG+ + +T +LG GS KTTL+ A+AGR+ K + G VT NG + + + +AY+ Q DL +T+ ETL FSA F + LS+ +K + D ++ LGL A T++GDE ++ LF+DE +GLD ++ F +V L+Q Sbjct: 183 VSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLGKDLKASGKVTYNGHGMEEFVPERTAAYISQHDLHIGEMTVRETLAFSARCQGVGSRFDMLTELSRREKAANIKPDADIDAFMKAAAMGGQEANVNTDYILKILGLEICADTMVGDEMLRGISGGQRKRVTTGEMLVGPARALFMDEISTGLDSSTTFQIVNSLRQ 380
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.147e-22 Identity = 72/252 (28.57%), Postives = 129/252 (51.19%), Query Frame = 1 Query: 175 KELESEPINDYSSVISIDMPYSNGSSSNE---LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +ELE I D +S I+ ++ S+S + LP PL +SFN++ YSV + + + +Q +SG R G +TA++G SG+ KTTLMD +AGR + ++G + ++G + IS Y Q+D+ +T+ E+L+FSA RLP + E ++ ++ ++D + L S ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 817 QELELSHIADQNSGINS----ADSSASRKGMVLPFAPLSISFNDVRYSVDMPEAMK-------AQGITEDRLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWLRLPSEVDSEARKMFIEEVMDLVELTSLRGALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVV 1057 HSP 2 Score: 72.0182 bits (175), Expect = 5.339e-12 Identity = 52/198 (26.26%), Postives = 90/198 (45.45%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSA-------EFRLPRSLSKEKKRKRV------------------------DALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQ 894 +SG+ + +T +LG GS KTTL+ A+AG++ K ++ G VT NG + + + +AY+ Q DL +T+ ETL FSA + + L++ +K + D ++ LGL A T++G+E ++ LF+DE +GLD ++ + +V L+Q Sbjct: 177 VSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDKDLKVSGKVTYNGHGMHEFVPERTAAYISQHDLHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAANIKPDHDIDIYMKASAMGGQESSVVTDYILKILGLDICADTVVGNEMLRGISGGQRKRVTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQ 374
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG8_RAT (ATP-binding cassette sub-family G member 8 OS=Rattus norvegicus GN=Abcg8 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.147e-22 Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLK-GTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +S R G++ AI+G++G + TL+D I GR ++K G + +NG+ +L++ A+V Q D L LT+ ETL F A+ RLP++ S+ ++ KRV+ +I +L LR A T +G+ ++ +P +L LDEP SGLD +A N+V+ L ++AK +V+ Sbjct: 113 LSFKVRSGQMLAIIGSAGCGRATLLDVITGRDHGGKMKSGQIWINGQPSTPQLIQKCVAHVRQQDQLLPNLTVRETLTFIAQMRLPKTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVRTLSRLAKGNRLVL 288
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22 Identity = 62/176 (35.23%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLK-GTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +S R G++ AI+G+SG + +L+D I GR ++K G + +NG+ +L++ A+V Q + L LT+ ETL F A+ RLPR+ S+ ++ KRV+ +I +L LR A T +G+ ++ +P +L LDEP SGLD +A N+VK L ++AK +V+ Sbjct: 91 LSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKIKSGQIWINGQPSSPQLVRKCVAHVRQHNQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCADTRVGNMYVRGLSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAKGNRLVL 266
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG7_DICDI (ABC transporter G family member 7 OS=Dictyostelium discoideum GN=abcG7 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22 Identity = 80/268 (29.85%), Postives = 122/268 (45.52%), Query Frame = 1 Query: 109 NVELQNQNXXXXXXXXXXXXINKELESEPINDYSSVISIDMPYSNGSSSNELPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXX-----DIIHDPILLFLDEPISGLDFTSAFNVVKVLKQI 897 N+ + +N K+LE E N +S S D+ S + +L N+L+ S K+ Q + P + +SG+ + E+ + G SGS K+TL+D +A R S + G + +NG+ +G K S YV QD++L T+EETL F A+ RLP LS + K K V+ +I +GL + + IG ++ +P LLFLDEP SGLD +A V+KVL + Sbjct: 165 NISYKTENRNYKKQIKDEKKRKKKLEMERSNSSNSNSSYDVESSASGLQTPQQSRSSILPTNSLNIS-KIDQSMNPQQTRSTTNGKIEKEITILSNVSGIIEKSEMVGLFGPSGSGKSTLLDILANRKSTGTISGKILVNGKEIGDAYKKYCS-YVTQDEILLQTSTVEETLKFHADLRLP-GLSDQDKWKVVEQVIKDIGLTKKSKSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNALKVMKVLMNL 429
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22 Identity = 74/249 (29.72%), Postives = 125/249 (50.20%), Query Frame = 1 Query: 178 ELESEPINDYSSVISIDMPYSNGSSSNELPNYPLL-LSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 E+E++ +N + +D ++ + LP + + F +LSYSV P+ P++ + ISG GE+ AI+G SG+ K+TLM+ +AG + +KG V +NG + + +S Y+MQDD+L LT++E +M SA +L E +R+ V ++ LGL A T G +++++P ++F DEP SGLD S F VV ++K +A+ G ++ Sbjct: 43 EVETDLLNGHLK--KVDNNFTEAQRFSSLPRRAAVNIEFKDLSYSV-------PEGPWWKKKGYKTLLKG----ISGKFNSGELVAIMGPSGAGKSTLMNILAG-YRETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE--KDEGRREMVKEILTALGLLPCANTRTGS-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIV 270
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.554e-22 Identity = 62/220 (28.18%), Postives = 115/220 (52.27%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL ++F+N+ YSV + Q++ + +SG R G +TA++G SG KTTLMD +AGR + ++G + ++G + IS Y Q+D+ +T+ E+L++SA RLP + +++++ VD ++D + L S +++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 836 LPFTPLSITFDNVKYSVDMPQEMK-------DRGVTEDKLLLLKGVSGAFRPGVLTALMGVSGRGKTTLMDVLAGRKTGGYIEGDIRISGYPKNQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPAEVDEKQRKMFVDEVMDLVELNSLRGSLVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVV 1048 HSP 2 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 51/197 (25.89%), Postives = 88/197 (44.67%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSA-------EFRLPRSLSKEKKRKRV-----------------------DALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQ 894 +SG+ + +T +LG G+ KTTL+ A+AG++ ++ G VT NG + + + SAY+ Q D+ +T+ ETL FS+ + + LS+ +K + D ++ LGL A T++GD ++ LF+DE +GLD ++ F +V L+Q Sbjct: 177 VSGIIKPCRMTLLLGPPGAGKTTLLLALAGKLDNTLKVTGNVTYNGHGMHEFVPQRTSAYISQHDVHIGEMTVRETLAFSSRCQGVGTRYEMLTELSRREKEANIKPDPDVDVYMKAVAVEGQESVVTDYILKILGLDICADTMVGDGMIRGISGGQKKRVTTGEMLVGPSKALFMDEISTGLDSSTTFQIVNSLRQ 373 The following BLAST results are available for this feature:
BLAST of FC877834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877834 ID=FC877834; Name=FC877834; organism=Citrus clementina; type=EST; length=923bpback to top |