FC877834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.554e-22 Identity = 60/220 (27.27%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL L+F+N+ YSV + Q++ + +SG R G +TA++G SG+ KTTLMD +AGR + ++G +T++G + +S Y Q+D+ +T+ E+L+FSA RLP+ + ++ ++ +++ + L+ ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 860 LPFAPLSLTFDNIKYSVDMPQEMK-------AHGIVEDRLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKKQETFARVSGYCEQNDIHSPQVTVSESLLFSAWLRLPKDVDSNTRKMFIEEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1072 HSP 2 Score: 78.1814 bits (191), Expect = 7.449e-14 Identity = 57/198 (28.79%), Postives = 90/198 (45.45%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSA-------EFRLPRSLSKEKKRKRV------------------------DALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQ 894 +SG+ + +T +LG GS KTTL+ A+AGR+ K + G VT NG + + + +AY+ Q DL +T+ ETL FSA F + LS+ +K + D ++ LGL A T++GD+ ++ LF+DE +GLD ++ F +VK L+Q Sbjct: 192 VSGIVKPRRMTLLLGPPGSGKTTLLLALAGRLGKDIKFSGQVTYNGHQMEDFVPQRTAAYISQHDLHIGEMTVRETLSFSARCQGVGSRFDMLTELSRREKAANIKPDADIDAFMKASAMEGQETNLITDYILKILGLDICADTMVGDDMVRGISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVKSLRQ 389
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.554e-22 Identity = 62/176 (35.23%), Postives = 100/176 (56.82%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLK-GTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +S R G++ AI+G+SG + +L+D I GR ++K G + +NG+ +L++ A+V Q D L LT+ ETL F A+ RLPR+ S+ ++ KRV+ +I +L LR A T +G+ ++ +P +L LDEP SGLD +A N+V L ++AK +V+ Sbjct: 92 LSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMKSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAKGNRLVL 267
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB32G_ARATH (ABC transporter G family member 32 OS=Arabidopsis thaliana GN=ABCG32 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.554e-22 Identity = 68/220 (30.91%), Postives = 112/220 (50.91%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL LSF+N++Y V V L Q I+G R G +TA++G SG+ KTTLMD +AGR + ++G V ++G + IS Y Q+D+ LT+ E+L+FSA RLP + E +R V +++ + L S + ++G +++ +P ++F+DEP SGLD +A V++ ++ I +G ++ Sbjct: 811 LPFQPLSLSFSNINYYVDVPLGLK-------EQGILEDRLQLLVNITGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGTIEGDVYISGFPKRQETFARISGYCEQNDVHSPCLTVVESLLFSACLRLPADIDSETQRAFVHEVMELVELTSLSGALVGLPGVDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIV 1023
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.336e-22 Identity = 64/220 (29.09%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL + F N++Y V V +L SQ ++G R G +TA++G SG+ KTTLMD +AGR + ++G++T++G + IS Y Q+D+ LT+ E+L++SA RLP + +R V+ +++ + L + + ++G +++ +P ++F+DEP SGLD SA V++ ++ I +G ++ Sbjct: 817 LPFQPLSMCFKNINYYVDVPAELK-------SQGIVEDRLQLLIDVTGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGLIEGSITISGYPKNQETFTRISGYCEQNDVHSPCLTVIESLLYSACLRLPSHVDVNTRRVFVEEVMELVELNALSGALVGLPGVNGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARSAAIVMRTVRNIVNTGRTIV 1029
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG1_HUMAN (ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1 PE=2 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 4.357e-22 Identity = 70/213 (32.86%), Postives = 110/213 (51.64%), Query Frame = 1 Query: 283 LSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 + F +LSYSV P+ P++ + ISG GE+ AI+G SG+ K+TLM+ +AG + +KG V +NG + + +S Y+MQDD+L LT++E +M SA +L E +R+ V ++ LGL S A T G +++++P ++F DEP SGLD S F VV ++K +A+ G +I Sbjct: 77 IEFRDLSYSV-------PEGPWWRKKGYKTLLKG----ISGKFNSGELVAIMGPSGAGKSTLMNILAG-YRETGMKGAVLINGLPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE--KDEGRREMVKEILTALGLLSCANTRTGS-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSII 270
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.357e-22 Identity = 64/228 (28.07%), Postives = 116/228 (50.88%), Query Frame = 1 Query: 250 SSNELPNYPLLLSFNNLSYSVKVGQ----KLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 S N LP PL +F ++ Y ++ Q +LL D ++G + G +TA++G SG+ KTTL+D ++GR ++ +KG + + G V +S Y Q D+ LT++E+L +SA RLP ++S E K V+ +++ + L +++G +++ +P ++F+DEP +GLD +A V++ +K IA++G V+ Sbjct: 787 SKNALPFEPLTFTFQDVQYFIETPQGKKLQLLSD-------------------VTGAFKPGVLTALMGVSGAGKTTLLDVLSGRKTRGDIKGQIEVGGYVKVQDTFSRVSGYCEQFDIHSPNLTVQESLKYSAWLRLPCNISSETKSAIVNEVLETIELEEIKDSLVGVPGISGVTAEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNIAETGRTVV 995 HSP 2 Score: 71.633 bits (174), Expect = 6.973e-12 Identity = 56/209 (26.79%), Postives = 96/209 (45.93%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFR-------LPRSLSKEKKRK------------------------RVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAK--SGSIVI 921 +SG+ R +T +LG G KTTL+ A++GR+ + +G V+ NG + + + S+YV Q+DL L++ ETL FS F+ + + +S+ +K K + D ++ LGL A T +GD I+ LF+DE +GLD ++ F ++ L+Q A+ G+I++ Sbjct: 157 VSGIIRPKRMTLLLGPPGCGKTTLLLALSGRLDPSLKTRGEVSYNGHLFSEFVPEKTSSYVSQNDLHIPELSVRETLDFSGCFQGAGSRLEMMKEISRREKLKGIVPDPDIDAYMKAASIEGSKTNLQTDYILKILGLTICADTRVGDASRPGISGGQKRRLTTGEMIVGPIKTLFMDEISNGLDSSTTFQILSCLQQFARLSEGTILV 365
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.357e-22 Identity = 60/220 (27.27%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP P ++F+N+ YSV + Q+++ Q ++G R G +TA++G SG+ KTTLMD +AGR + + G +T++G + IS Y Q D+ +T+ E+L++SA RLP+ + K K++ ++ +++ + L ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 818 LPFEPHSITFDNVVYSVDMPQEMI-------EQGTQEDRLVLLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGNITISGYPKNQQTFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPKEVDKNKRKIFIEEVMELVELTPLRQALVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1030
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 5.691e-22 Identity = 63/176 (35.80%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 400 SGVAREGEITAILGASGSSKTTLMDAIAGRISKQRL-KGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGD-EQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +G + G + A++G+SGS KTTLM +A R + +G + +NG +G + +I S YV QDDL LT+ E L F A RL R +SKE++R + L+++ GL SAA T IG + +++++P++LF DEP +GLD SA +V L ++A+ G+ ++ Sbjct: 95 TGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHRI-SGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTIL 269
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG2_DICDI (ABC transporter G family member 2 OS=Dictyostelium discoideum GN=abcG2 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 5.691e-22 Identity = 63/175 (36.00%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 I+G + G + A++G SG+ K+TL+D +A R + KG + +NG+ +K +SAYV Q D+L T++E ++FSA+ RLP + E+K K V+ +I+ L L IG + ++ DP LLFLDEP SGLD ++A V+ ++K+IA SG +I Sbjct: 741 INGYVKPGMLLALMGPSGAGKSTLLDVLANRKTGGHTKGQILINGQER-TKYFTRLSAYVEQFDVLPPTQTVKEAILFSAKTRLPSDMPNEEKIKFVENIIETLNLLKIQNKQIGHGEEGLSLSQRKRVNIGV-ELASDPQLLFLDEPTSGLDSSAALKVMNLIKKIASSGRSII 913 HSP 2 Score: 85.1149 bits (209), Expect = 6.094e-16 Identity = 57/218 (26.15%), Postives = 101/218 (46.33%), Query Frame = 1 Query: 277 LLLSFNNLSYSV---KVGQK--LLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSI 915 + ++ NLS S+ K G K +L DL FF + G + ILG+ G KT++M A+A ++ + + G++ NG+ AYV+Q D + T+ ET FSA+ ++ S+E+K RVD ++ L L T++G+E +++ D L +DEP +GLD T+ ++K ++++ + Sbjct: 51 MYVTARNLSMSIGTEKKGDKRNILSDLNFF-------------------LKPGSMVLILGSPGCGKTSVMKALANQLHSETVSGSLLFNGKAANKSTHHRDVAYVVQGDHHMAPFTVRETFKFSADLQMSEGTSEEEKNARVDYILKTLDLTRQQDTVVGNEFLRGVSGGQKKRVTIGVEMVKDAGLFLMDEPSTGLDSTTTLELMKHFRELSNVNQV 249
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.707e-22 Identity = 66/232 (28.45%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 238 SNGSSSNE----LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 ++G + N+ LP PL +SF+++ Y V + ++ Q ++G R G +TA++G SG+ KTTLMD +AGR + ++G V ++G + IS Y Q D+ +T+ E+L+FSA RLP+ + K++K VD +++ + L S +I+G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 848 ASGGAGNKKGMVLPFTPLAMSFDDVKYFVDMPGEMR-------DQGVTETRLQLLKGVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKVQETFARISGYCEQTDIHSPQVTVRESLIFSAFLRLPKEVGKDEKMMFVDQVMELVELDSLRDSIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVV 1072 HSP 2 Score: 79.7221 bits (195), Expect = 2.560e-14 Identity = 60/199 (30.15%), Postives = 93/199 (46.73%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSA-------EFRLPRSLSKEKKRKRV------------------------DALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQI 897 ISGV + G +T +LG S KTTL+ A+AG++ K ++ G +T NG L + + SAY+ Q+DL ++T++ETL FSA + L L++ +K + D + LGL TI+GD+ I+ LF+DE +GLD ++ F +VK L+QI Sbjct: 190 ISGVIKPGRMTLLLGPPSSGKTTLLLALAGKLDKSLQVSGDITYNGYQLDEFVPRKTSAYISQNDLHVGIMTVKETLDFSARCQGVGTRYDLLNELARREKDAGIFPEADVDLFMKASAAQGVKNSLVTDYTLKILGLDICKDTIVGDDMMRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQI 388 The following BLAST results are available for this feature:
BLAST of FC877834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877834 ID=FC877834; Name=FC877834; organism=Citrus clementina; type=EST; length=923bpback to top |