FC877834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.162e-21 Identity = 58/220 (26.36%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL L+F ++ YSV + Q++ + +SG R G +TA++G SG+ KTTLMD +AGR + ++G ++++G + +S Y Q+D+ +T+ E+L+FSA RLP+ + ++ ++ +++ + L+ ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 864 LPFTPLSLTFEDIKYSVDMPQEMK-------AHGIVEDRLELLKGVSGCFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYPKKQETFARVSGYCEQNDIHSPQVTVSESLLFSAWLRLPKDVDSNTRKMFIEEVMELVELKPLRDALVGLPGVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVV 1076 HSP 2 Score: 76.2554 bits (186), Expect = 2.831e-13 Identity = 54/197 (27.41%), Postives = 87/197 (44.16%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSA-------EFRLPRSLSKEKKRKRV------------------------DALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQ 894 ISG+ + +T +LG GS KTT + A+AGR+ + G VT NG + + + +AY+ Q DL +T+ ETL FSA F + L++ +K + D ++ LGL A T++GD+ ++ F+DE +GLD ++ F +VK L+Q Sbjct: 197 ISGIIKPKRMTLLLGPPGSGKTTFLLALAGRLKDLKFSGQVTYNGHQMEDFVPQRTAAYISQHDLHIGEMTVRETLSFSARCQGVGSRFDMLTELTRREKAANIKPDADVDAFMKASAMEGQESNLITDYILKILGLEICADTMVGDDMVRGISGGQRKRVTTGEMLVGPANAFFMDEISTGLDSSTTFQIVKSLRQ 393
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB28G_ARATH (ABC transporter G family member 28 OS=Arabidopsis thaliana GN=ABCG28 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.162e-21 Identity = 56/171 (32.75%), Postives = 96/171 (56.14%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSG 909 ++G G ++A++G SG+ KTT + A+ G+ + G + +NG+V + K I +V QDD+++ LT+EE L FSA RLP L K +K V+ +I+ LGL+ +++G + +++ +P LL LDEP SGLD +S+ +++ L++ A G Sbjct: 519 VTGKLSPGRVSAVMGPSGAGKTTFLTALTGKAPGCIMTGMILVNGKVESIQSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLPADLPKPEKVLVVERVIESLGLQHVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEG 689
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.689e-21 Identity = 60/220 (27.27%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL ++F+N+ YSV + Q++ + +SG R G +TA++G SG+ KTTLMD +AGR + ++G ++++G + I+ Y Q+D+ +T+ E+L++SA RLP + E ++ V+ +++ + L S ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 839 LPFTPLSITFDNIRYSVDMPQEMK-------DKGVTEDRLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDISISGYPKKQETFARIAGYCEQNDIHSPHVTVYESLLYSAWLRLPSEVDSEARKMFVEEVMELVELTSLRGALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1051 HSP 2 Score: 73.1738 bits (178), Expect = 2.396e-12 Identity = 55/197 (27.92%), Postives = 90/197 (45.69%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRI-SKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSA-------EFRLPRSLSKEKKRKRV-----------------------DALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQ 894 ISG+ R G ++ +LG GS KT+L+ A+AG++ S ++ G VT NG + + + SAY+ Q DL +T+ ETL FSA + + LS+ +K + D ++ LGL A T++GD ++ LF+DE +GLD ++ + +V L+Q Sbjct: 173 ISGIIRPGRMSLLLGPPGSGKTSLLLALAGKLDSTLKVSGRVTYNGHDMDEFVPQRTSAYIGQHDLHIGEMTVRETLAFSARCQGVGTRYDMLTELSRREKEASIKPDPDIDVYMKAISVEGQESVVTDYILKILGLEICADTMVGDAMIRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTYQIVNSLRQ 369
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG3_DICDI (ABC transporter G family member 3 OS=Dictyostelium discoideum GN=abcG3 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.689e-21 Identity = 56/164 (34.15%), Postives = 90/164 (54.88%), Query Frame = 1 Query: 430 AILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 A++G SG+ K+TLMD +A R + + G + +NG+++ + + YV Q D+L + LT+ E + FSA RLP S ++ + K +D ++ L L T IG ++ DP L+FLDEP SGLD ++A V+ +K+IA+SG V+ Sbjct: 825 ALMGPSGAGKSTLMDVLAKRKNVGTITGDIRINGQLVKDMNITRFTGYVEQQDILSANLTVREAIEFSANCRLPSSYLQKDRVKLIDEILSVLSLTKMQNTTIGPNPTLGISLANRKKVSIGIELASDPHLIFLDEPTSGLDSSAALKVMNCVKKIAESGRTVV 988 HSP 2 Score: 93.2041 bits (230), Expect = 2.238e-18 Identity = 51/170 (30.00%), Postives = 93/170 (54.71%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDII-HDPILLFLDEPISGLDFTSAFNVVKVLKQIAK 903 IS + G + ++G G+ K+ L+ + R+ K +++G + N + + + +V QDD ++LT+ ETL FSA+ + ++S+E++ +RVD ++DQLGL + TIIG++ + P L+ +DEP +GLD +++NV+ +K IAK Sbjct: 130 ISFTMKPGRMILLMGIPGAGKSLLLKVLGNRLGKGKIEGELKFNNHEVDETTHQRDTIFVSQDDRHIALLTVRETLEFSAKCNMGENVSQEEQSERVDLVLDQLGLSHTSNTIIGNQFFRGISGGQKRRVTIANEFTKRSPNLILMDEPSTGLDSATSYNVISKVKTIAK 299
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: WHT3_CAEEL (ABC transporter ATP-binding protein/permease wht-3 OS=Caenorhabditis elegans GN=wht-3 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.817e-21 Identity = 65/177 (36.72%), Postives = 100/177 (56.50%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLK-GTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXX-DIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +SG+A+ GE+ A++GASG+ KTTLM+ + R K K GTV +NG +G K + +IS + Q ++ LT++E LM A R+ +K +R+RVD +I+ L L++ IG +++ +P LLF DEP SGLD A +VV++LK +A SG +I Sbjct: 60 VSGIAKPGEMVALMGASGAGKTTLMNVLMCRNMKGLEKNGTVKVNGTKIG-KEISLISGFAQQQEIFIPTLTVDEYLMIQARLRM--KANKHTRRERVDEIIEMLRLQNCRDLKIGTPGLVKGISGGEARRLTFACELLSNPSLLFADEPTSGLDSFMAASVVQILKNLANSGRTLI 233
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.292e-21 Identity = 64/175 (36.57%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 I+ + +I AI+G SG+ K+TL+D +A R S G++ LN ++ + IS+YV Q D + +LT+ ET FSA LP++LSK V +L+ +L L A T +G ++HDP +L LDEP SGLD SAF+VV++LK IA S ++ Sbjct: 34 ITLTSHPSQILAIIGPSGAGKSTLLDILAARTSPT--SGSILLNSVLINPSSYRKISSYVPQHDTFFPLLTVSETFTFSASLLLPKNLSKVSSV--VASLLKELNLTHLAHTRLGQ----GLSGGERRRVSIGLSLLHDPEVLLLDEPTSGLDSKSAFDVVQILKSIATSRERIV 200
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.217e-21 Identity = 69/250 (27.60%), Postives = 122/250 (48.80%), Query Frame = 1 Query: 172 NKELESEPINDYSSVISIDMPYSNGSSSNELPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 N E ES P +S D N LP P ++F+ + YSV + P++ G+ +SG R G +TA++G SG+ KTTLMD +AGR + + G++ ++G IS Y Q+D+ +T+ E+L++SA RLP+ +++EK+ V+ ++D + L ++G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 803 NNESESSP--QITSTQEGDSASENKKKGMVLPFDPHSITFDEVVYSVDMP----PEMRESGTSDNRLVLLKS---VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGSIKISGYPKKQDTFARISGYCEQNDIHSPYVTVFESLVYSAWLRLPQDVNEEKRMMFVEEVMDLVELTPLRSALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVV 1043 HSP 2 Score: 74.7146 bits (182), Expect = 8.236e-13 Identity = 59/198 (29.80%), Postives = 92/198 (46.46%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRI-SKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSA-------EFRLPRSLSKEKKRKRV--DALIDQ----------------------LGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQ 894 +SG+ + +T +LG GS KTTL+ A+AG++ S ++ G VT NG L + + +AY+ Q DL +T+ ETL FSA + + LS+ +K + DA ID LGL A T++GD+ I+ LF+DE +GLD ++ +++V LKQ Sbjct: 184 VSGIVKPCRMTLLLGPPGSGKTTLLLALAGKLDSALKVTGKVTYNGHELHEFVPQRTAAYISQHDLHIGEMTVRETLEFSARCQGVGSRYEMLAELSRREKAANIKPDADIDMFMKAASTEGQEAKVVTDYILKILGLDICADTMVGDQMIRGISGGQKKRVTTGEMIVGPSKALFMDEISTGLDSSTTYSIVNSLKQ 381
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.217e-21 Identity = 63/180 (35.00%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXX-----DIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +SGV +GE+ A++G SGS K+TL+D +A R S ++ G + +NG+ +G K S YV Q+D+L T+ ETL F A+ +LP +S+ +K KRV+ +I+ +GL + IG ++ +P L+FLDEP SGLD +A ++K L + G VI Sbjct: 77 VSGVIEKGELVALMGPSGSGKSTLLDILAQRKSTGKITGQLLVNGKEIGEAYKKYCS-YVTQEDVLLQTSTVFETLKFYADLKLP-GVSEIEKIKRVEQIIEDIGLTKRTHSKIGGVLPGGILMKGLSGGEKRRVSIGCGLVTNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLKGVTVI 254
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.217e-21 Identity = 65/257 (25.29%), Postives = 127/257 (49.42%), Query Frame = 1 Query: 169 INKELESEPINDYSSVISIDMPYSNGSSSNE------LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 I+++ SE S + + P + +NE LP PL ++F +L+Y V V ++ Q I+G R G +TA++G SG+ KTTL+D +AGR + ++G + ++G + + +S Y Q D+ +T+EE+L++SA RL ++ + K + V +++ + L ++G +++ +P ++F+DEP +GLD +A V++ +K +A++G ++ Sbjct: 769 ISQDKLSELQGTKDSSVKKNKPLDSSIKTNEDPGKMILPFKPLTITFQDLNYYVDVPVEMK-------GQGYNEKKLQLLSEITGAFRPGVLTALMGISGAGKTTLLDVLAGRKTSGYIEGEIRISGFLKVQETFARVSGYCEQTDIHSPSITVEESLIYSAWLRLVPEINPQTKIRFVKQVLETIELEEIKDALVGVAGVSGLSTEQRKRLTVAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVAETGRTIV 1018
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCGG_DICDI (ABC transporter G family member 16 OS=Dictyostelium discoideum GN=abcG16 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.073e-20 Identity = 79/253 (31.23%), Postives = 120/253 (47.43%), Query Frame = 1 Query: 190 EPINDYSSVISIDMPYSNGSSSNELPNYPLLLSFNNLSYSV--------KVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPR-SLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 E IN+ S +SI SNE L+F NL+Y V KV + LL D I+G + G + A++G+SG+ K+TL+D +A R + + G + LNG+ K AYV Q+D L T+ E + FSA RLP +++ + K VD ++D L L S A T+IG H ++ P +LFLDEP +GL +A +++++K++A G VI Sbjct: 810 ESINEESIKLSIKQHQQKQFESNE----KCYLTFKNLTYKVLIKKKNHQKVSRTLLHD-------------------INGYVKPGSMVALIGSSGAGKSTLLDILANRKDQGIISGEILLNGKA-RDKCFNRYVAYVEQEDTLPDFQTVREAITFSALLRLPNDTMTHQDKLDTVDYILDVLELNSIANTLIGKVDH-GITQEQRKRVNIAIEMASLPDILFLDEPTTGLTSVAAELIMQLIKRVALDGRSVI 1037 The following BLAST results are available for this feature:
BLAST of FC877834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877834 ID=FC877834; Name=FC877834; organism=Citrus clementina; type=EST; length=923bpback to top |