FC877834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: WHT1_CAEEL (ABC transporter ATP-binding protein/permease wht-1 OS=Caenorhabditis elegans GN=wht-1 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.187e-19 Identity = 59/178 (33.15%), Postives = 100/178 (56.18%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGR-ISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRL-PRSLSKEKKRKRVDALIDQLGLRSAAMTIIG-DEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +SG+A G++ AILG+SG+ KTTLM+ + R ++ ++G++ ++G ++ +SA+V Q D+ +T E L F A R+ + S +++ RV+ ++ Q+GL+ A T+IG Q +I+ P +LF DEP SGLD A +VV+ L+ +A +G VI Sbjct: 13 VSGMAESGKLLAILGSSGAGKTTLMNVLTSRNLTNLDVQGSILIDGRRANKWKIREMSAFVQQHDMFVGTMTAREHLQFMARLRMGDQYYSDHERQLRVEQVLTQMGLKKCADTVIGIPNQLKGLSCGEKKRLSFASEILTCPKILFCDEPTSGLDAFMAGHVVQALRSLADNGMTVI 190
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCG5_RAT (ATP-binding cassette sub-family G member 5 OS=Rattus norvegicus GN=Abcg5 PE=2 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19 Identity = 61/176 (34.66%), Postives = 98/176 (55.68%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +S G+ ILG+SGS KTTL+DAI+GR+ + L+G V +NG L + +Y++Q D+ S LT+ ETL ++A L RS S + K+V+A++ +L L A +IG+ ++ DP ++ LDEP +GLD +A ++V +L ++A+ IVI Sbjct: 73 VSLYIESGQTMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCELRRDQFQDCVSYLLQSDVFLSSLTVRETLRYTAMLAL-RSSSADFYDKKVEAVLTELSLSHVADQMIGNYNFGGISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANHIVLLLVELARRNRIVI 247
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19 Identity = 62/232 (26.72%), Postives = 117/232 (50.43%), Query Frame = 1 Query: 247 SSSNE-------LPNYPLLLSFNNLSYSVKVGQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 SSSN+ LP PL L+FNN++Y V + ++ +Q + G R G +TA++G SG+ KTTLMD +AGR + ++G+++++G +S Y Q+D+ +T+ E+L++SA RL + + + V+ +++ + L+ +I+G +++ +P ++F+DEP SGLD +A V++ ++ +G V+ Sbjct: 834 SSSNKGPKRGMVLPFQPLSLAFNNVNYYVDMPSEMK-------AQGVEGDRLQLLRDVGGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQTTFARVSGYCEQNDIHSPHVTVYESLIYSAWLRLSTDIDIKTRELFVEEVMELVELKPLRNSIVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1058
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: WBC30_ARATH (Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 2.024e-19 Identity = 53/171 (30.99%), Postives = 93/171 (54.39%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSG 909 ++G G ++A++G SG+ KTT + A+AG+ + G + +NG K I+ +V QDD+++ LT+EE L FSA RL +SK K ++ +I+ LGL+ +++G + +++ +P LL LDEP +GLD S+ +++ L++ A G Sbjct: 485 VTGKIMPGRVSAVMGPSGAGKTTFLSALAGKATGCTRTGLILINGRNDSINSYKKITGFVPQDDVVHGNLTVEENLRFSARCRLSAYMSKADKVLIIERVIESLGLQHVRDSLVGTIEKRGISGGQRKRVNVGVEMVMEPSLLILDEPTTGLDSASSQLLLRALRREALEG 655
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCGE_DICDI (ABC transporter G family member 14 OS=Dictyostelium discoideum GN=abcG14 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.643e-19 Identity = 65/213 (30.52%), Postives = 113/213 (53.05%), Query Frame = 1 Query: 280 LLSFNNLSYSVKV--GQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGD-EQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSG 909 + ++ N+ Y+VKV G++LL + I G + G++TA++G+SG+ KTTL+D +A R + ++G LNG L +I + YV Q D+ LT+ E L FSA+ R +S E+K K V+ +++ + ++ +IG E +++ P +LFLDEP SGLD S++N++K ++++A +G Sbjct: 804 IFTWQNIRYTVKVPGGERLLLN------------------NIEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTLGVVEGDSHLNGRELEIDFERI-TGYVEQMDVHNPGLTVREALRFSAKLRQEPEVSLEEKFKYVEHVLEMMEMKHLGDALIGTLETGVGISVEERKRLTIGVELVAKPQILFLDEPTSGLDAQSSYNIIKFIRKLADAG 997
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: BROWN_DROME (Protein brown OS=Drosophila melanogaster GN=bw PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.452e-19 Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 400 SGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQI 897 SG + G++ AILG SG+ KTTL+ AI+ R+ + L G V LNG + + IS+++ Q ++ T E L F + F++ R +K +KR+RV L+ +GLR AA T I ++I DPI LF DEP +GLD SA++V+K L+ + Sbjct: 53 SGHMKTGDLIAILGGSGAGKTTLLAAISQRL-RGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHTRIQQ-----LSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHL 212
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: ABCGJ_DICDI (ABC transporter G family member 19 OS=Dictyostelium discoideum GN=abcG19 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19 Identity = 64/213 (30.05%), Postives = 113/213 (53.05%), Query Frame = 1 Query: 280 LLSFNNLSYSVKV--GQKLLPDLPFFGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGD-EQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSG 909 + ++ N++Y+V V G++LL D + G + G++TA++G+SG+ KTTL+D +A R + ++G LNG+ L + I+ YV Q D+ LT+ E L FSA+ R S+ E+K V+ +++ + ++ +IG E +++ P +LFLDEP SGLD S++N+VK ++++A +G Sbjct: 817 IFTWQNINYTVPVKGGKRLLLD------------------NVEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTMGEVQGKCFLNGKPLEIDFER-ITGYVEQMDVHNPGLTVREALRFSAKLRQEPSVLLEEKFDYVEHVLEMMEMKHLGDALIGTLETGVGISVEERKRLTIGVELVAKPHILFLDEPTSGLDAQSSYNIVKFIRKLADAG 1010
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19 Identity = 59/221 (26.70%), Postives = 110/221 (49.77%), Query Frame = 1 Query: 262 LPNYPLLLSFNNLSYSVKVGQKLLPDLPF-FGSQXXXXXXXXXXXXISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 LP PL ++F +L+Y V D+P Q I+G R G +TA++G SG+ KTTL+D +AGR + ++G + ++G + +S Y Q D+ +T+EE++++SA RL + K K V +++ + L +++G +++ +P ++F+DEP +GLD +A V++ +K +A +G ++ Sbjct: 843 LPFKPLTVTFQDLNYFV--------DMPVEMRDQGYDQKKLQLLSDITGAFRPGILTALMGVSGAGKTTLLDVLAGRKTSGYIEGDIRISGFPKVQETFARVSGYCEQTDIHSPNITVEESVIYSAWLRLAPEIDATTKTKFVKQVLETIELDEIKDSLVGVTGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIV 1055 HSP 2 Score: 73.1738 bits (178), Expect = 2.396e-12 Identity = 55/207 (26.57%), Postives = 91/207 (43.96%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQ-RLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFR-------LPRSLSKEKKRKRV------------------------DALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 ++G+ + G +T +LG KTTL+ A++G + + G ++ NG L + + SAY+ Q DL + +T+ ET+ FSA + + +SK +K K + D ++ LGL A +IGD I+ LF+DE +GLD ++AF +VK L+Q A S + Sbjct: 193 VNGIIKPGRLTLLLGPPSCGKTTLLKALSGNLENNLKCSGEISYNGHRLDEFVPQKTSAYISQYDLHIAEMTVRETVDFSARCQGVGSRTDIMMEVSKREKEKGIIPDTEVDAYMKAISVEGLQRSLQTDYILKILGLDICAEILIGDVMRRGISGGQKKRLTTAEMIVGPTKALFMDEITNGLDSSTAFQIVKSLQQFAHISSATV 399
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: YN99_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YNR070W OS=Saccharomyces cerevisiae GN=YNR070W PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.889e-19 Identity = 62/180 (34.44%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGRISKQRLKGTVTLNGEVLGSKL-----LKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSLSKEKKRKRVDALIDQLGLRSAAMTIIGDEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 +SG G +TA++G SG+ KTTL++ +A QR GT+T G++L L K + YV Q DL + LT++E+L FSA R P+S+ +K + V+ +I L ++ + ++G+ + + +LLFLDEP SGLD SA+ VVK+LK++A +G ++ Sbjct: 751 VSGYCVPGTLTALIGESGAGKTTLLNTLA-----QRNVGTIT--GDMLVDGLPMDASFKRRTGYVQQQDLHVAELTVKESLQFSARMRRPQSIPDAEKMEYVEKIISILEMQEFSEALVGEIGYGLNVEQRKKLSIGVELVGKPDLLLFLDEPTSGLDSQSAWAVVKMLKRLALAGQSIL 923
BLAST of FC877834 vs. ExPASy Swiss-Prot
Match: WHITE_ANOAL (Protein white OS=Anopheles albimanus GN=W PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.889e-19 Identity = 67/183 (36.61%), Postives = 99/183 (54.10%), Query Frame = 1 Query: 397 ISGVAREGEITAILGASGSSKTTLMDAIAGR------ISKQRLKGTVTLNGEVLGSKLLKIISAYVMQDDLLYSMLTIEETLMFSAEFRLPRSL-SKEKKRKRVDALIDQLGLRSAAMTIIG-DEQHXXXXXXXXXXXXXXXDIIHDPILLFLDEPISGLDFTSAFNVVKVLKQIAKSGSIVI 921 ++GVAR GE+ A++G+SG+ KTTL++ +A R IS ++ TLNG + ++ ++ AYV QDDL LT +E LMF A R+ R + + K RVD ++ +L L A TIIG + + + DP LL DEP S LD A +V++VLK +A G +I Sbjct: 122 VTGVARSGELLAVMGSSGAGKTTLLNELAFRSPPGVKISPNAIR---TLNGVPVTAEQMRARCAYVQQDDLFIPSLTTKEHLMFQAMLRMGRDVPATPIKMHRVDEVLQELSLVKCADTIIGVAGRVKGLSGGERKRTAFRSETLTDPHLLLCDEPTSSLDSFMAQSVLQVLKGMAMKGKTII 301 The following BLAST results are available for this feature:
BLAST of FC877834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877834 ID=FC877834; Name=FC877834; organism=Citrus clementina; type=EST; length=923bpback to top |