FC877837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL3G_ARATH (RING-H2 finger protein ATL3G OS=Arabidopsis thaliana GN=ATL3G PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.627e-18 Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 459 GLDDSVINTFPTFLYSAVR---ELKIGKGSL----ECAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRANLVPQPGE-TP-SSFIPVLNPDVGSS 749 GLDDSVI T P FLYSA + +GK S +CAVCL EF + + +R +P C H FH++CID WL +H CP+CR ++ G TP S F+P++ P + S Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPS 225
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL3L_ARATH (RING-H2 finger protein ATL3L OS=Arabidopsis thaliana GN=ATL3L PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.240e-17 Identity = 59/178 (33.15%), Postives = 90/178 (50.56%), Query Frame = 3 Query: 303 MAIVTVILVSVFFILGFFSV---YIRQCTERGRNSPDAFATIIGGINQ--RSRRGARGLDDSVINTFPTFLYSAVRELKIGKGSLE-CAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRANLVP-QPGETPS-------SFIPVLNPDVGSSRLEQGSDNIQEISST 794 +A V ++ V+V IL F S R+ R R A + +S LD +V+ P F+YS +K + LE C+VCL+EF +++ R++PKC HVFH+DCID W + ++CP+CRA + P QP P S P+ + + GSS S++ SS+ Sbjct: 30 LASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYS----VKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSDESESSTPSSSS 203
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.390e-16 Identity = 51/179 (28.49%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 264 DAFSVTGPKFNGTMAIVTVILVSVFFILGFFSVYIRQCTERGRNSPDAFATI------IGGINQRSRRGARGLDDSVINTFPTFLYSAVRELKIGKGSLE---CAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRANL--VPQPGETPSSFIPVLNPDVGSSRLEQGS 767 D S + F+ + + IL S ++ ++++ + C + S + QR GL++S+I + + Y K G G ++ C+VCL+EF + E+LRL+PKC+H FH+ CID WL +H+ CP+CRA + V P + + V+ + +S + GS Sbjct: 45 DDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKY------KSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGS 217
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL1F_ARATH (RING-H2 finger protein ATL1F OS=Arabidopsis thaliana GN=ATL1F PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.816e-16 Identity = 51/137 (37.23%), Postives = 68/137 (49.64%), Query Frame = 3 Query: 312 VTVILV-SVFFIL--GFFSVYIRQC----------TERGRNSPDAFATIIGGINQRSRRGARGLDDSVINTFPTFLYSAVRELKIGKGSLECAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRANL 683 VT++L S+ FI+ GFFS + C R RN P I + GLD +I +FP + YS G+ +C++CL EF D++T+RLI C+H FH CID W H TCPVCR L Sbjct: 74 VTIVLTGSLLFIIFTGFFSFFFCGCLFRKLMRIWNNHRNRNRPSNL------IQPSNPPENLGLDSKIIESFPEYPYSVKDH-----GTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRREL 199
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL1R_ARATH (RING-H2 finger protein ATL1R OS=Arabidopsis thaliana GN=ATL1R PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.371e-16 Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = 3 Query: 285 PKFNGTMAIV-TVILVSVFFILGFFSV----YIRQCTERGRNSPDAFATIIGGINQRSRRGARGLDDSVINTFPTFLYSAVRELKIGKGSLECAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRANLV----PQPGETPSSFIPVLNPDVGSSRLEQGSDNI 776 P FN + ++ V+L ++ I+G +V ++R+ R R S + N +GL V+ + P YS + + +ECA+CL EF + LR++P+C H FH+ CID WL +H++CP CR LV + G P S PD + E G DN+ Sbjct: 22 PPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNR-SDQTHPPPVAAAN-------KGLKKKVLRSLPKLTYSP--DSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPDNL 184
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL3J_ARATH (RING-H2 finger protein ATL3J OS=Arabidopsis thaliana GN=ATL3J PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.097e-16 Identity = 55/167 (32.93%), Postives = 90/167 (53.89%), Query Frame = 3 Query: 306 AIVTVILVSVFFILGFFSV-YIRQCTERGRNS---PDAFATIIGGINQRSRR--GARGLDD----SVINTFPTFLYSAVRELKIGKGSLECAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRANLVPQPGETPSSFIPVLNPDVG---SSRLEQGS 767 +++ +IL+ + +L S+ ++ +C R + P + ++ + + SRR G R + SV+++ P F +S+V S +CAVCL++F E+ LRL+P C H FH DCID WL ++ TCP+CR+ L + S V + + G S RLE GS Sbjct: 27 SVLVIILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSDSRRFSGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGS 193
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL3I_ARATH (RING-H2 finger protein ATL3I OS=Arabidopsis thaliana GN=ATL3I PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.097e-16 Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 459 GLDDSVINTFPTFLYSAVRELKIGKGSLECAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRANL 683 GLD + I+ P FLY V + +CAVCLNEF D + LRL+P CSH FH+ CID WL +++TCP+CR +L Sbjct: 180 GLDQTAIDALPVFLYGNVTISL--EQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL2M_ARATH (RING-H2 finger protein ATL2M OS=Arabidopsis thaliana GN=ATL2M PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.097e-16 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 459 GLDDSVINTFPTFLYS-----AVRELKIGKGSLECAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRANLVPQPGETPSS 713 GLD +VIN++P F +S A + G G C++CL E+ + E LR++P+C H FH+ C+DAWL + +CPVCR + +P P TP S Sbjct: 104 GLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLS 193
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL2N_ARATH (RING-H2 finger protein ATL2N OS=Arabidopsis thaliana GN=ATL2N PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.045e-16 Identity = 61/165 (36.97%), Postives = 88/165 (53.33%), Query Frame = 3 Query: 279 TGPKFNGTMAI--VTVILVSVFFILGFFSVYIRQCTER-GRNSPDAFATIIGGINQRSRRGARGLDDSVINTFPTFLYSAVRELKIGKGSLECAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRANLVP--QPGET--PSSFIPVLNPDVGSSR 752 +G NG + + V V+ V+V IL F S Y R R R + + ++ R A LD +V++ P F+YS+ + + EC+VCL+EF +E+ RL+PKC H FH+DCID W + +TCP+CRA + P Q ET SS P+ P G R Sbjct: 20 SGYALNGKIMLSSVIVLFVAVIMILCFHS-YARWLFRRHNRRIRRRIRSHLRTLSASPRDQA--LDQAVLDKIPIFVYSS-KNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPTEGCER 180
BLAST of FC877837 vs. ExPASy Swiss-Prot
Match: ATL2K_ARATH (RING-H2 finger protein ATL2K OS=Arabidopsis thaliana GN=ATL2K PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.283e-16 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 3 Query: 309 IVTVILVSVFFILGF-FSVYIRQCTERGRNSPDAFATIIGGINQRSRRGARGLDDSVINTFPTFLYSAVRELKIGKGSLECAVCLNEFGDEETLRLIPKCSHVFHMDCIDAWLSAHNTCPVCRA-------NLVPQPGETP-SSFIPVLN 731 +VT + S+ I+ F + +Y + R D +++ S+ RGLD VI + PTF+ +K ECAVCL+ +++ R++P C HVFH+ C+D WL+ +TCPVCR L P+P E P F P L+ Sbjct: 30 LVTTVSFSIIIIIVFVYYLYAKFVLHRRSAFQDLSFSVV------SQPPKRGLDSLVIASLPTFVVG----IKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVGDFAPPLD 169 The following BLAST results are available for this feature:
BLAST of FC877837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877837 ID=FC877837; Name=FC877837; organism=Citrus clementina; type=EST; length=842bpback to top |