FC877839

Overview
NameFC877839
Unique NameFC877839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SRK2C_ARATH (Serine/threonine-protein kinase SRK2C OS=Arabidopsis thaliana GN=SRK2C PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.071e-43
Identity = 108/260 (41.54%), Postives = 144/260 (55.38%), Query Frame = 3
Query:  126 KYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLD--ENGNLKVSDFGLSAVKDQIRTDGLLH----TLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKK----IYKGEFRCPKW--MXXXXXXXXXXXXXTNPETRITV 866
            +YE+ K +G G F      RD  +    AVK I + +     +  +++REI   R L HP+I++  EVL T + +  VME+  GGELF +I   GRFSED +R +FQQLIS V YCHS  + HRDLK EN LLD  E   +K+ DFG S         G+LH    T  GTPAY+APE+LS K YDG   D+WSCGV L+V+  G  PF DP+    ++K    I K ++  P +  +              NPE RIT+
Sbjct:    3 RYEIVKDIGSGNFGVAKLVRDKFSKELFAVKFIERGQ----KIDEHVQREIMNHRSLIHPNIIRFKEVLLTATHLALVMEYAAGGELFGRICSAGRFSEDEARFFFQQLISGVNYCHSLQICHRDLKLENTLLDGSEAPRVKICDFGYSK-------SGVLHSQPKTTVGTPAYIAPEVLSTKEYDGKIADVWSCGVTLYVMLVGAYPFEDPSDPKDFRKTIGRILKAQYAIPDYVRVSDECRHLLSRIFVANPEKRITI 251          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: STK33_MOUSE (Serine/threonine-protein kinase 33 OS=Mus musculus GN=Stk33 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 9.069e-43
Identity = 105/273 (38.46%), Postives = 154/273 (56.41%), Query Frame = 3
Query:   66 IERHNVSENPRAQ--AANALFGK---------------YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLL-----LDENG----NLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGE--FRCPKW 797
            I   NV   P+AQ   +N   GK               Y  G++LG G+F  V+ A D   G   A+K +NK K  SS +   ++RE+SI++ +NH HI+ L +V  +  K+Y VME  + GEL A +  +G FSE+ +R   Q L SA+ Y H++ + HRDLK EN++     +D+N     N+KV+DFGLS  K   R++G++ T CGTP Y+APE+++   Y   + D+WS GVI+F+L  G  PF   +   +Y+ I KGE  F  P W
Sbjct:   73 IRTSNVERKPQAQWSRSNVTVGKIPHIRMDDGAGIEEFYTFGRILGQGSFGMVFEAIDKETGAKWAIKKVNKEKAGSSAM-KLLEREVSILKTVNHQHIIHLEQVFESPQKMYLVMELCEDGELKAVMDQRGHFSENETRLIIQSLASAIAYLHNKDIVHRDLKLENIMVKSSFIDDNNEMNLNIKVTDFGLSVQKHGSRSEGMMQTTCGTPIYMAPEVINAHDY-SQQCDIWSIGVIMFILLCGEPPFLANSEEKLYELIKKGELRFENPVW 343          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: PK2_DICDI (Protein kinase 2 OS=Dictyostelium discoideum GN=pkgB PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 9.069e-43
Identity = 91/225 (40.44%), Postives = 142/225 (63.11%), Query Frame = 3
Query:  129 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 800
            +EL  ++G G+F KV   +     +  A+KV+ K+ I++   V++ K E +I++ ++HP IV L+    TK K+Y V++FV GGELF  + + GRFSE   + Y  +++SA+ + H + + +RDLKPEN+LLD  G++ ++DFGLS  K    TDG   T CGTP Y+APE+L+  G+ G  VD WS G +L+ +  G  PF   N+ +MY+KI  GE + P ++
Sbjct:  153 FELLNVIGKGSFGKVMQVKKKGEDKIFAMKVLRKDAIIARKQVNHTKSEKTILQCISHPFIVNLHYAFQTKDKLYMVLDFVNGGELFFHLKREGRFSEPRVKIYAAEIVSALDHLHKQDIVYRDLKPENILLDSEGHICITDFGLS--KKIETTDGTF-TFCGTPEYLAPEVLNGHGH-GCAVDWWSLGTLLYEMLTGLPPFYSQNVSTMYQKILNGELKIPTYI 373          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: HUNK_PANTR (Hormonally up-regulated neu tumor-associated kinase OS=Pan troglodytes GN=HUNK PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.069e-43
Identity = 100/224 (44.64%), Postives = 140/224 (62.50%), Query Frame = 3
Query:  123 GKYELG-KLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVS-NIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFN-DP-NLMSMYKKIYKGE 779
            G Y +G + LG G+FAKV     VL G  VA+KVI+K +      V+ N++RE  I + + HP+I +L ++L T++  Y VME   GG L  KI  K R  E  +R+Y +QLISAV + H  GV HRDLK ENLLLDE+ N+K+ DFGLS     +       T CG+PAY APE+L++K Y G K+D+WS GV ++ +  G LPF  +P +L ++Y+K+   E
Sbjct:   59 GNYLIGSRKLGEGSFAKVREGLHVLTGEKVAIKVIDKKRAKKDTYVTKNLRREGQIQQMIRHPNITQLLDILETENSYYLVMELCPGGNLMHKIYEKKRLEESEARRYIRQLISAVEHLHRAGVVHRDLKIENLLLDEDNNIKLIDFGLSNCAGILGYSDPFSTQCGSPAYAAPELLARKKY-GPKIDVWSIGVNMYAMLTGTLPFTVEPFSLRALYQKMVDKE 281          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: HUNK_HUMAN (Hormonally up-regulated neu tumor-associated kinase OS=Homo sapiens GN=HUNK PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.069e-43
Identity = 100/224 (44.64%), Postives = 140/224 (62.50%), Query Frame = 3
Query:  123 GKYELG-KLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVS-NIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFN-DP-NLMSMYKKIYKGE 779
            G Y +G + LG G+FAKV     VL G  VA+KVI+K +      V+ N++RE  I + + HP+I +L ++L T++  Y VME   GG L  KI  K R  E  +R+Y +QLISAV + H  GV HRDLK ENLLLDE+ N+K+ DFGLS     +       T CG+PAY APE+L++K Y G K+D+WS GV ++ +  G LPF  +P +L ++Y+K+   E
Sbjct:   59 GNYLIGSRKLGEGSFAKVREGLHVLTGEKVAIKVIDKKRAKKDTYVTKNLRREGQIQQMIRHPNITQLLDILETENSYYLVMELCPGGNLMHKIYEKKRLEESEARRYIRQLISAVEHLHRAGVVHRDLKIENLLLDEDNNIKLIDFGLSNCAGILGYSDPFSTQCGSPAYAAPELLARKKY-GPKIDVWSIGVNMYAMLTGTLPFTVEPFSLRALYQKMVDKE 281          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: CDR2_SCHPO (Mitosis inducer protein kinase cdr2 OS=Schizosaccharomyces pombe GN=cdr2 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.069e-43
Identity = 87/249 (34.94%), Postives = 147/249 (59.04%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELF-AKIAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G +ELG  LG G       A+    G+   VK I     ++S+  + I+ E+ ++R + HP++++L +V++ + +++ V+E++ GGELF   + KG F+E  + K+  Q++  + YCH   + HRDLKPENL LD +G++K+ +FG+++++   +   LL T CG+P Y +PEI+  + YDG   D+WSCG+I F L  G LPF+D N+ S+  K+ +G+F  P  +              +  TRIT+
Sbjct:    8 GPWELGLSLGSGGPNSSRLAKHRETGQLAVVKPIVGWSELTSSQQARIEGELVLLRLIEHPNVLQLIDVISAQEQLFVVVEYMPGGELFDCMLRKGSFTEQDTAKFLWQILCGLEYCHKLHICHRDLKPENLYLDAHGSIKIGEFGMASIQQPGK---LLQTSCGSPHYASPEIIMGRSYDGCASDIWSCGIIFFALLTGKLPFDDDNIRSLLLKVCQGQFEMPSNISPQAQHLLYRMLDVDSSTRITM 253          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: KCC1A_RAT (Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus GN=Camk1 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.184e-42
Identity = 102/244 (41.80%), Postives = 147/244 (60.25%), Query Frame = 3
Query:   87 ENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSE-DLSRKYFQQLISAVGYCHSRGVFHRDLKPENLL---LDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG--EFRCPKW 797
            E PR + A  +   Y+   +LG GAF++V  A D    + VA+K I K  +       +++ EI+++ ++ HP+IV L ++  +   +Y +M+ V GGELF +I  KG ++E D SR  F Q++ AV Y H  G+ HRDLKPENLL   LDE+  + +SDFGLS ++D      +L T CGTP YVAPE+L++K Y  A VD WS GVI ++L  GY PF D N   ++++I K   EF  P W
Sbjct:    6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKPYSKA-VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: KCC1A_MOUSE (Calcium/calmodulin-dependent protein kinase type 1 OS=Mus musculus GN=Camk1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.184e-42
Identity = 102/244 (41.80%), Postives = 147/244 (60.25%), Query Frame = 3
Query:   87 ENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSE-DLSRKYFQQLISAVGYCHSRGVFHRDLKPENLL---LDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG--EFRCPKW 797
            E PR + A  +   Y+   +LG GAF++V  A D    + VA+K I K  +       +++ EI+++ ++ HP+IV L ++  +   +Y +M+ V GGELF +I  KG ++E D SR  F Q++ AV Y H  G+ HRDLKPENLL   LDE+  + +SDFGLS ++D      +L T CGTP YVAPE+L++K Y  A VD WS GVI ++L  GY PF D N   ++++I K   EF  P W
Sbjct:    6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKPYSKA-VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: KCC1A_HUMAN (Calcium/calmodulin-dependent protein kinase type 1 OS=Homo sapiens GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.184e-42
Identity = 102/244 (41.80%), Postives = 147/244 (60.25%), Query Frame = 3
Query:   87 ENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSE-DLSRKYFQQLISAVGYCHSRGVFHRDLKPENLL---LDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG--EFRCPKW 797
            E PR + A  +   Y+   +LG GAF++V  A D    + VA+K I K  +       +++ EI+++ ++ HP+IV L ++  +   +Y +M+ V GGELF +I  KG ++E D SR  F Q++ AV Y H  G+ HRDLKPENLL   LDE+  + +SDFGLS ++D      +L T CGTP YVAPE+L++K Y  A VD WS GVI ++L  GY PF D N   ++++I K   EF  P W
Sbjct:    6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKPYSKA-VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SNRK_RAT (SNF-related serine/threonine-protein kinase OS=Rattus norvegicus GN=Snrk PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.020e-42
Identity = 94/210 (44.76%), Postives = 134/210 (63.81%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAKGR--FSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLL-DENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPN 743
            G Y+L K LG G FA V  AR V  G  VAVKVI+K K+  +    ++ +E+  M+ + HP+IV+LYEV+ T++K+Y ++E   GG++F  I K     +EDL++KYF Q++ A+ YCH   V HRDLKPEN++  ++ G +K++DFG S   ++ +    L T CG+ AY APEIL    YD   VD+WS GVILF+L  G  PF + N
Sbjct:   14 GLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL-DTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEKQGLVKLTDFGFS---NKFQPGKKLTTSCGSLAYSAPEILLGDEYDAPAVDIWSLGVILFMLVCGQPPFQEAN 219          
The following BLAST results are available for this feature:
BLAST of FC877839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRK2C_ARATH4.071e-4341.54Serine/threonine-protein kinase SRK2C OS=Arabidops... [more]
STK33_MOUSE9.069e-4338.46Serine/threonine-protein kinase 33 OS=Mus musculus... [more]
PK2_DICDI9.069e-4340.44Protein kinase 2 OS=Dictyostelium discoideum GN=pk... [more]
HUNK_PANTR9.069e-4344.64Hormonally up-regulated neu tumor-associated kinas... [more]
HUNK_HUMAN9.069e-4344.64Hormonally up-regulated neu tumor-associated kinas... [more]
CDR2_SCHPO9.069e-4334.94Mitosis inducer protein kinase cdr2 OS=Schizosacch... [more]
KCC1A_RAT1.184e-4241.80Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_MOUSE1.184e-4241.80Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_HUMAN1.184e-4241.80Calcium/calmodulin-dependent protein kinase type 1... [more]
SNRK_RAT2.020e-4244.76SNF-related serine/threonine-protein kinase OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA65DB09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877839 ID=FC877839; Name=FC877839; organism=Citrus clementina; type=EST; length=867bp
ATTTTTATTCTTCGTTAGCTTTGTCATCTTCATCGCCTCAGGTTCGATCT
CTGGTTATGTCAGAGATCGAACGACACAATGTTTCAGAAAATCCTCGCGC
CCAGGCCGCCAATGCCTTGTTCGGGAAGTACGAGCTGGGCAAGCTCCTGG
GCTGCGGGGCCTTTGCTAAAGTCTATCACGCGCGCGACGTCCTCAACGGA
CGCAGCGTCGCAGTCAAAGTGATTAACAAGAACAAGATCATGTCCTCCAA
TTTAGTCTCCAACATCAAGCGAGAAATCTCCATCATGCGCCGTTTGAACC
ACCCTCACATCGTCAAGCTCTACGAGGTCTTAGCCACCAAGTCCAAGATT
TACTGCGTCATGGAGTTCGTCAAAGGCGGCGAGCTCTTCGCGAAGATCGC
CAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAAGTACTTCCAGCAACTCA
TATCCGCCGTCGGATATTGCCACTCGCGCGGAGTCTTCCACCGCGACTTG
AAGCCGGAGAACCTTTTGCTGGACGAGAACGGGAATTTAAAAGTCTCGGA
TTTCGGACTCAGCGCCGTGAAGGATCAGATTCGTACGGACGGGCTGTTGC
ACACGCTTTGTGGGACCCCTGCTTACGTGGCACCGGAGATTTTGTCTAAG
AAGGGATACGATGGAGCTAAGGTCGACTTGTGGTCATGCGGCGTCATTTT
GTTCGTATTGACGGCAGGTTACCTGCCGTTTAACGATCCGAATTTGATGA
GCATGTATAAGAAGATATATAAAGGTGAATTTCGGTGCCCTAAATGGATG
TCTAGCGATCTGAGACGGCTTTTGTCGCGACTTCTTGATACAAATCCAGA
GACGAGGATCACCGTTG
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