FC877839

Overview
NameFC877839
Unique NameFC877839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.895e-32
Identity = 85/230 (36.96%), Postives = 127/230 (55.22%), Query Frame = 3
Query:  129 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLN-HPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLL---DENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGE--FRCPKW 797
            Y L K LG G F   Y   +   G+  A K I+K K+++     +++REI IM+ L+  P+IV+       +  +  VME   GGELF +I AKG +SE  +    +Q+++ V  CH  GV HRDLKPEN LL   DE   +K +DFGLS   ++ R   +   + G+  YVAPE+L ++   G ++D+WS G+IL++L +G  PF       ++  I +GE  F    W
Sbjct:   73 YTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAKGHYSERAAASVCRQIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGR---VYKDIVGSAYYVAPEVLKRR--YGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPW 297          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: PK4_DICDI (Protein kinase 4 (Fragment) OS=Dictyostelium discoideum GN=pkgD PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.475e-32
Identity = 74/202 (36.63%), Postives = 121/202 (59.90%), Query Frame = 3
Query:  129 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPF 731
            ++L  LLG G+FAKV   + + + R   +K++N+NKI+      ++  E  ++   ++P IVKLY        +Y + EF+ GGELF  I A G  S  +++ Y  +++ A+ Y H++ + +RDLKPENLL+D+ G++K++DFG +      R      ++CGTP Y+APEILS  G+ G   D WS G++++ +  G  PF
Sbjct:  679 FKLFDLLGSGSFAKVRLCQHIPSERLFCMKILNQNKIIRLRQEVHVCNEKQVLMLTDNPFIVKLYSTFKDDRYLYFLQEFIPGGELFDYIRANGSLSLYVTQIYAAEIVLALEYLHNQDIIYRDLKPENLLIDQYGHIKLTDFGFAK-----RITENTKSMCGTPEYIAPEILSGHGH-GKSADWWSLGILIYEMLVGVPPF 874          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: KGP25_DROME (cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 OS=Drosophila melanogaster GN=for PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 2.475e-32
Identity = 84/214 (39.25%), Postives = 119/214 (55.61%), Query Frame = 3
Query:  147 LGCGAFAKVYHARDVLNG---RSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG 776
            LG G F +V   +   NG   RS A+K + K++I+ +    +I  E  IM   N   IVKL++    K  +Y +ME   GGEL+  +  KG F +  +R Y   ++ A  Y HSR + +RDLKPENLLL+E G +K+ DFG +    +++T     T CGTP YVAPE++  +G+D    D WS GV++F L  G  PF   + M  Y  I KG
Sbjct:  629 LGVGGFGRVELVQT--NGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMGEANCQFIVKLFKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLNERGYVKLVDFGFA---KKLQTGRKTWTFCGTPEYVAPEVILNRGHD-ISADYWSLGVLMFELLTGTPPFTGSDPMRTYNIILKG 836          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: KGP24_DROME (cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B OS=Drosophila melanogaster GN=for PE=1 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 2.475e-32
Identity = 84/214 (39.25%), Postives = 119/214 (55.61%), Query Frame = 3
Query:  147 LGCGAFAKVYHARDVLNG---RSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG 776
            LG G F +V   +   NG   RS A+K + K++I+ +    +I  E  IM   N   IVKL++    K  +Y +ME   GGEL+  +  KG F +  +R Y   ++ A  Y HSR + +RDLKPENLLL+E G +K+ DFG +    +++T     T CGTP YVAPE++  +G+D    D WS GV++F L  G  PF   + M  Y  I KG
Sbjct:  783 LGVGGFGRVELVQT--NGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMGEANCQFIVKLFKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLNERGYVKLVDFGFA---KKLQTGRKTWTFCGTPEYVAPEVILNRGHD-ISADYWSLGVLMFELLTGTPPFTGSDPMRTYNIILKG 990          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.475e-32
Identity = 85/220 (38.64%), Postives = 125/220 (56.82%), Query Frame = 3
Query:  129 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLN-HPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLL---DENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYK 773
            Y LG+ LG G     Y  +++  G   A K I K K++S     ++K EI IM+ L+  P++V++      +  ++ VME   GGELF +I A+G +SE  +    + ++  V  CH  GV HRDLKPEN L    +EN  LKV+DFGLSA    I    +   + G+P YVAPE+L ++ Y G ++D+WS GVIL++L  G  PF   N   ++ +I K
Sbjct:   69 YSLGRELGRGGLGITYMCKEIGTGNIYACKSILKRKLISELGREDVKTEIQIMQHLSGQPNVVEIKGSYEDRHSVHLVMELCAGGELFDRIIAQGHYSERAAAGTIKSIVDVVQICHLNGVIHRDLKPENFLFSSKEENAMLKVTDFGLSAF---IEEGKIYKDVVGSPYYVAPEVL-RQSY-GKEIDIWSAGVILYILLCGVPPFWADNEEGVFVEILK 283          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.475e-32
Identity = 78/206 (37.86%), Postives = 118/206 (57.28%), Query Frame = 3
Query:  129 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRL-NHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLL---DENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPF 731
            Y+LG+ +G G F   Y   D+  G   A K I+K K+ ++  + +++RE+ IM+ +  HP+IV L +       ++ VME  +GGELF +I A+G ++E  +    + ++  V  CH  GV HRDLKPEN L     E   LK  DFGLS      +     + + G+P Y+APE+L ++ Y G +VD+WS GVIL++L  G  PF
Sbjct:   57 YDLGREVGRGEFGITYLCTDIKTGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPRHPNIVSLKDAFEDDDAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTILEVVQICHKHGVMHRDLKPENFLFANKKETSALKAIDFGLSVF---FKPGEGFNEIVGSPYYMAPEVL-RRNY-GPEVDIWSAGVILYILLCGVPPF 257          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: PLK1_XENTR (Serine/threonine-protein kinase PLK1 OS=Xenopus tropicalis GN=plk1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.233e-32
Identity = 85/250 (34.00%), Postives = 127/250 (50.80%), Query Frame = 3
Query:  126 KYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAKGR--FSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            +Y  G+ LG G FAK Y   D+ +    A K++ K  ++  +    +  EI+I R L+H H+V  +        +Y V+E  +   L  ++ K R   +E  +R Y +Q I    Y HS  V HRDLK  NL L++   +K+ DFGL+    ++  DG    TLCGTP Y+APE+L KKG+   +VD+WS G I++ L  G  PF    L   Y +I K E+  PK +             + P +R T+
Sbjct:   43 RYLRGRFLGKGGFAKCYEITDLESREVFAGKIVPKTMLLKPHQKDKMTMEIAIQRSLDHRHVVGFHGFFEDNDFVYVVLELCRRRSLL-ELHKRRKAVTEPEARYYLKQTILGCQYLHSNRVIHRDLKLGNLFLNDEMEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLGKKGH-SFEVDIWSIGCIMYTLLVGKPPFETSCLKETYMRIKKNEYSVPKHINPMATALIQKMLRSEPTSRPTI 287          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: PHKG2_RAT (Phosphorylase b kinase gamma catalytic chain, testis/liver isoform OS=Rattus norvegicus GN=Phkg2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.233e-32
Identity = 90/252 (35.71%), Postives = 136/252 (53.97%), Query Frame = 3
Query:   87 ENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKN-KIMSSNLVSNIK----REISIMRRL-NHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEIL------SKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG--EFRCPKW 797
            E P   AA   + KY+   ++G G  + V        G   AVK++  + + +S   +  ++    RE+ I+R++  HPHI+ L +   + S ++ V + ++ GELF  +  K   SE  +R   + L+ AV + H   + HRDLKPEN+LLD+N  +++SDFG S     +     L  LCGTP Y+APEIL      +  GY G +VDLW+CGVILF L AG  PF     + M + I +G  +F  P+W
Sbjct:   10 ELPDWAAAKEFYQKYDPKDIIGRGVSSVVRRCVHRATGDEFAVKIMEVSAERLSLEQLEEVRDATRREMHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVNFLHVNNIVHRDLKPENILLDDNMQIRLSDFGFSC---HLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW 257          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: Y8013_DICDI (Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.222e-32
Identity = 78/226 (34.51%), Postives = 119/226 (52.65%), Query Frame = 3
Query:  117 LFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAKGRFS---------------------EDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPF 731
            + G+Y LGK LG G +  V     +     +A+K++ K ++  S   +  KREI I+++L HP I KL  VL     ++ +M++ +GG+LF  + K                         ED +++ F Q+   + +CH   + HRD+K +N+L D   N+K+ DFGLS    Q +      + CGTPAY APE+L    Y+G +VD+WS GVIL+ L  G LPF
Sbjct:  538 MIGEYTLGKTLGRGNYGVVKLGTHINTKEEIAIKILYKEQMTESEF-TRCKREIEILKQLYHPFINKLLNVLEKDDAMFILMDYCQGGDLFHYVNKFGLKGVKMVNSPDIGDQVLMGVPLPEDDTKRIFTQICLGIAHCHKLNIAHRDIKHKNILFDNQMNVKIIDFGLSNWSYQEKM-----SFCGTPAYAAPEMLLGINYNGPEVDIWSLGVILYSLVTGKLPF 757          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SRK1_SCHPO (Serine/threonine-protein kinase srk1 OS=Schizosaccharomyces pombe GN=srk1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.222e-32
Identity = 94/273 (34.43%), Postives = 135/273 (49.45%), Query Frame = 3
Query:  126 KYELGKLLGCGAFAKVYHARDVLNGRSVAVKVIN------------KNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSR-GVFHRDLKPENLLLDE---------------------------------NGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGE--FRCPKW 797
            +Y L + +G GAF+ VY A     G  VA+KV+             K + + S+   NI +E+ IMRR+ HP+I++L E + T    Y V+E   GGELF +I +   FSEDLSR    Q+  A+ Y H   GV HRD+KPENLL D                                   G ++++DFGLS    ++  D    T CGT  Y APEI+  + Y    VD+W+ G +L+ +  G+ PF D ++  + KK+ +GE  F  P W
Sbjct:  123 QYTLLQKMGDGAFSNVYKAIHNRTGEKVAIKVVQRAQPNTDPRDPRKRQGVESH---NILKEVQIMRRVKHPNIIQLLEFIQTPEYYYLVLELADGGELFHQIVRLTYFSEDLSRHVITQVAHAIRYLHEDCGVVHRDIKPENLLFDSIDFVPSRVRKYRAGDDPDKVDEGEFIPGVGAGTIGRIRLADFGLS----KVVWDSHTQTPCGTMGYTAPEIVRDERYSKG-VDMWALGCVLYTILCGFPPFYDESISLLTKKVSRGEYSFLSPWW 387          
The following BLAST results are available for this feature:
BLAST of FC877839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDPKX_ARATH1.895e-3236.96Calcium-dependent protein kinase 33 OS=Arabidopsis... [more]
PK4_DICDI2.475e-3236.63Protein kinase 4 (Fragment) OS=Dictyostelium disco... [more]
KGP25_DROME2.475e-3239.25cGMP-dependent protein kinase, isozyme 2 forms cD5... [more]
KGP24_DROME2.475e-3239.25cGMP-dependent protein kinase, isozyme 2 forms cD4... [more]
CDPKN_ARATH2.475e-3238.64Calcium-dependent protein kinase 23 OS=Arabidopsis... [more]
CDPK8_ARATH2.475e-3237.86Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
PLK1_XENTR3.233e-3234.00Serine/threonine-protein kinase PLK1 OS=Xenopus tr... [more]
PHKG2_RAT3.233e-3235.71Phosphorylase b kinase gamma catalytic chain, test... [more]
Y8013_DICDI4.222e-3234.51Probable serine/threonine-protein kinase DDB_G0280... [more]
SRK1_SCHPO4.222e-3234.43Serine/threonine-protein kinase srk1 OS=Schizosacc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA65DB09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877839 ID=FC877839; Name=FC877839; organism=Citrus clementina; type=EST; length=867bp
ATTTTTATTCTTCGTTAGCTTTGTCATCTTCATCGCCTCAGGTTCGATCT
CTGGTTATGTCAGAGATCGAACGACACAATGTTTCAGAAAATCCTCGCGC
CCAGGCCGCCAATGCCTTGTTCGGGAAGTACGAGCTGGGCAAGCTCCTGG
GCTGCGGGGCCTTTGCTAAAGTCTATCACGCGCGCGACGTCCTCAACGGA
CGCAGCGTCGCAGTCAAAGTGATTAACAAGAACAAGATCATGTCCTCCAA
TTTAGTCTCCAACATCAAGCGAGAAATCTCCATCATGCGCCGTTTGAACC
ACCCTCACATCGTCAAGCTCTACGAGGTCTTAGCCACCAAGTCCAAGATT
TACTGCGTCATGGAGTTCGTCAAAGGCGGCGAGCTCTTCGCGAAGATCGC
CAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAAGTACTTCCAGCAACTCA
TATCCGCCGTCGGATATTGCCACTCGCGCGGAGTCTTCCACCGCGACTTG
AAGCCGGAGAACCTTTTGCTGGACGAGAACGGGAATTTAAAAGTCTCGGA
TTTCGGACTCAGCGCCGTGAAGGATCAGATTCGTACGGACGGGCTGTTGC
ACACGCTTTGTGGGACCCCTGCTTACGTGGCACCGGAGATTTTGTCTAAG
AAGGGATACGATGGAGCTAAGGTCGACTTGTGGTCATGCGGCGTCATTTT
GTTCGTATTGACGGCAGGTTACCTGCCGTTTAACGATCCGAATTTGATGA
GCATGTATAAGAAGATATATAAAGGTGAATTTCGGTGCCCTAAATGGATG
TCTAGCGATCTGAGACGGCTTTTGTCGCGACTTCTTGATACAAATCCAGA
GACGAGGATCACCGTTG
back to top