FC877839

Overview
NameFC877839
Unique NameFC877839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.953e-57
Identity = 116/250 (46.40%), Postives = 156/250 (62.40%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G Y LG  LG G F KV      L G  VAVK++N+ KI S ++V  IKREI  ++   HPHI+KLY+V++T +  + VME+V GGELF  I K GR  E  +R+ FQQ++SAV YCH   V HRDLKPEN+LLD   N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WSCGVIL+ L  G LPF+D ++ +++KKI  G F  P ++              +P  R T+
Sbjct:   14 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPDYLNRSVATLLMHMLQVDPLKRATI 259          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SNF1_YEAST (Carbon catabolite-derepressing protein kinase OS=Saccharomyces cerevisiae GN=SNF1 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.469e-57
Identity = 119/262 (45.42%), Postives = 168/262 (64.12%), Query Frame = 3
Query:   90 NPRAQAAN-ALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            NP++  A+ A  G Y++ K LG G+F KV  A     G+ VA+K+INK  +  S++   I+REIS +R L HPHI+KLY+V+ +K +I  V+E+  G ELF  I  + + SE  +R++FQQ+ISAV YCH   + HRDLKPENLLLDE+ N+K++DFGLS     I TDG  L T CG+P Y APE++S K Y G +VD+WSCGVIL+V+    LPF+D ++  ++K I  G +  PK++              NP  RI++
Sbjct:   41 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISI 297          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SNF1_CANGA (Carbon catabolite-derepressing protein kinase OS=Candida glabrata GN=SNF1 PE=3 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 6.469e-57
Identity = 119/264 (45.08%), Postives = 167/264 (63.26%), Query Frame = 3
Query:   81 VSENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            VS    + A  +  G Y++ K LG G+F KV  A  V  G+ VA+K+INK  +  S++   I+REIS +R L HPHI+KLY+V+ +K +I  V+E+  G ELF  I  + + SE  +R++FQQ+ISAV YCH   + HRDLKPENLLLDE+ N+K++DFGLS     I TDG  L T CG+P Y APE++S K Y G +VD+WSCGVIL+V+    LPF+D ++  ++K I  G +  PK++              NP  RI++
Sbjct:   23 VSNKVSSLADGSRVGNYQIVKTLGEGSFGKVKLAYHVTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRNKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGASDLIKRMLIVNPLNRISI 281          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MELK_MOUSE (Maternal embryonic leucine zipper kinase OS=Mus musculus GN=Melk PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.103e-56
Identity = 114/247 (46.15%), Postives = 162/247 (65.59%), Query Frame = 3
Query:  129 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            YEL + +G G FAKV  A  VL G  VA+K+++KN + S   +  +K EI  ++ L H HI +LY VL TK+KI+ V+E+  GGELF  I ++ R SE+ +R  F+Q++SAV Y HS+G  HRDLKPENLL DEN  LK+ DFGL A K +   D  L T CG+ AY APE++  K Y G++ D+WS G++L+VL  G+LPF+D N+M++YKKI +G++  PKW+              +P+ RI++
Sbjct:   11 YELYETIGTGGFAKVKLACHVLTGEMVAIKIMDKNALGSD--LPRVKTEIDALKSLRHQHICQLYHVLETKNKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQILSAVAYVHSQGYAHRDLKPENLLFDENHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYEVPKWLSPSSILLLQQMLQVDPKKRISM 254          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: AMPKA_DICDI (5'-AMP-activated serine/threonine-protein kinase catalytic subunit alpha OS=Dictyostelium discoideum GN=snfA PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.103e-56
Identity = 115/257 (44.75%), Postives = 159/257 (61.87%), Query Frame = 3
Query:  102 QAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDE-NGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            + ++ + G Y L K LG G+F KV  A  +  G  VA+K++N+ KI +  +   I+REI  M+   HPHI+KLYEV+ T + I+ VME+V GGELF  I K G+  ED SR+ FQQ+IS V YCH   V HRDLKPENLLLD  N  +K++DFGLS   + ++    L T CG+P Y APE++S K Y G +VD+WSCGVIL+      LPF+D ++  ++KKI +G F  P ++              +P  RIT+
Sbjct:   22 EKSSQIIGNYRLDKTLGIGSFGKVKLAEHIRTGVKVAIKILNRTKIKNLKMDEKIRREIQNMKLFRHPHIIKLYEVIETTTDIFMVMEYVTGGELFEYIVKNGKLLEDESRRLFQQMISGVDYCHHHMVVHRDLKPENLLLDPINKCIKIADFGLS---NMMQDGDFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYAFLCAKLPFDDESIPMLFKKIREGVFSIPDFVSPSCADLIKKMLVVDPVKRITI 275          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: AAPK1_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 1.103e-56
Identity = 113/228 (49.56%), Postives = 153/228 (67.11%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 800
            G Y LG  LG G F KV   +  L G  VAVK++N+ KI S ++V  I+REI  ++   HPHI+KLY+V++T S I+ VME+V GGELF  I K GR  E  SR+ FQQ++S V YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WS GVIL+ L  G LPF+D ++ +++KKI  G F  P+++
Sbjct:   25 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL 248          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 3.211e-56
Identity = 119/268 (44.40%), Postives = 173/268 (64.55%), Query Frame = 3
Query:   72 RHNVSENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYV-APEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            +  V  +P A  AN + G+Y++ K LG G+F KV  A+ +  G+ VA+K+IN+  +  S++   ++REIS +R L HPHI+KLY+V+ +K +I  V+EF  G ELF  I  +G+  ED +R++FQQ+I+AV YCH   + HRDLKPENLLLD+  N+K++DFGLS     I TDG  L T CG+P Y+ APE++S K Y G +VD+WS GVIL+V+  G LPF+D  + +++KKI  G +  P ++              NP  RIT+
Sbjct:   35 QQQVPIDPAANPANRI-GRYQILKTLGEGSFGKVKLAQHLGTGQKVALKIINRKTLAKSDMQGRVEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEFA-GKELFDYIVQRGKMPEDEARRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLNVKIADFGLS----NIMTDGNFLKTSCGSPNYMPAPEVISGKLYAGPEVDVWSAGVILYVMLCGRLPFDDEFIPALFKKISNGVYTLPNYLSAGAKHLLTRMLVVNPLNRITI 296          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: AAPK2_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Caenorhabditis elegans GN=aak-2 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 4.193e-56
Identity = 117/255 (45.88%), Postives = 155/255 (60.78%), Query Frame = 3
Query:  108 ANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            A    G Y L + LG G F KV           VAVK++N+ KI S ++V  I+REI  +    HPHI++LY+V++T S I+ +ME V GGELF  I K GR     +R++FQQ+IS V YCH   V HRDLKPENLLLDE  N+K++DFGLS     I TDG  L T CG+P Y APE++S K Y G +VD+WSCGVIL+ L  G LPF+D ++ S+++KI  G F  P ++              +P  R T+
Sbjct:   80 AQIKIGHYILKETLGVGTFGKVKVGIHETTQYKVAVKILNRQKIKSLDVVGKIRREIQNLSLFRHPHIIRLYQVISTPSDIFMIMEHVSGGELFDYIVKHGRLKTAEARRFFQQIISGVDYCHRHMVVHRDLKPENLLLDEQNNVKIADFGLS----NIMTDGDFLRTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDEHVPSLFRKIKSGVFPTPDFLERPIVNLLHHMLCVDPMKRATI 330          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.718e-55
Identity = 112/249 (44.98%), Postives = 159/249 (63.86%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G Y L K +G G FAKV  AR +L G+ VAVK+I+K ++ SS+L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M              NP  R T+
Sbjct:   51 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTL 295          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 2.718e-55
Identity = 112/249 (44.98%), Postives = 159/249 (63.86%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G Y L K +G G FAKV  AR +L G+ VAVK+I+K ++ SS+L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M              NP  R T+
Sbjct:   51 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTL 295          
The following BLAST results are available for this feature:
BLAST of FC877839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AAPK2_MOUSE4.953e-5746.405'-AMP-activated protein kinase catalytic subunit ... [more]
SNF1_YEAST6.469e-5745.42Carbon catabolite-derepressing protein kinase OS=S... [more]
SNF1_CANGA6.469e-5745.08Carbon catabolite-derepressing protein kinase OS=C... [more]
MELK_MOUSE1.103e-5646.15Maternal embryonic leucine zipper kinase OS=Mus mu... [more]
AMPKA_DICDI1.103e-5644.755'-AMP-activated serine/threonine-protein kinase c... [more]
AAPK1_MOUSE1.103e-5649.565'-AMP-activated protein kinase catalytic subunit ... [more]
SNF1_CANAL3.211e-5644.40Carbon catabolite-derepressing protein kinase OS=C... [more]
AAPK2_CAEEL4.193e-5645.885'-AMP-activated protein kinase catalytic subunit ... [more]
MARK2_RAT2.718e-5544.98Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_HUMAN2.718e-5544.98Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA65DB09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877839 ID=FC877839; Name=FC877839; organism=Citrus clementina; type=EST; length=867bp
ATTTTTATTCTTCGTTAGCTTTGTCATCTTCATCGCCTCAGGTTCGATCT
CTGGTTATGTCAGAGATCGAACGACACAATGTTTCAGAAAATCCTCGCGC
CCAGGCCGCCAATGCCTTGTTCGGGAAGTACGAGCTGGGCAAGCTCCTGG
GCTGCGGGGCCTTTGCTAAAGTCTATCACGCGCGCGACGTCCTCAACGGA
CGCAGCGTCGCAGTCAAAGTGATTAACAAGAACAAGATCATGTCCTCCAA
TTTAGTCTCCAACATCAAGCGAGAAATCTCCATCATGCGCCGTTTGAACC
ACCCTCACATCGTCAAGCTCTACGAGGTCTTAGCCACCAAGTCCAAGATT
TACTGCGTCATGGAGTTCGTCAAAGGCGGCGAGCTCTTCGCGAAGATCGC
CAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAAGTACTTCCAGCAACTCA
TATCCGCCGTCGGATATTGCCACTCGCGCGGAGTCTTCCACCGCGACTTG
AAGCCGGAGAACCTTTTGCTGGACGAGAACGGGAATTTAAAAGTCTCGGA
TTTCGGACTCAGCGCCGTGAAGGATCAGATTCGTACGGACGGGCTGTTGC
ACACGCTTTGTGGGACCCCTGCTTACGTGGCACCGGAGATTTTGTCTAAG
AAGGGATACGATGGAGCTAAGGTCGACTTGTGGTCATGCGGCGTCATTTT
GTTCGTATTGACGGCAGGTTACCTGCCGTTTAACGATCCGAATTTGATGA
GCATGTATAAGAAGATATATAAAGGTGAATTTCGGTGCCCTAAATGGATG
TCTAGCGATCTGAGACGGCTTTTGTCGCGACTTCTTGATACAAATCCAGA
GACGAGGATCACCGTTG
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