FC877839

Overview
NameFC877839
Unique NameFC877839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MELK_HUMAN (Maternal embryonic leucine zipper kinase OS=Homo sapiens GN=MELK PE=1 SV=3)

HSP 1 Score: 215.312 bits (547), Expect = 3.550e-55
Identity = 112/247 (45.34%), Postives = 160/247 (64.78%), Query Frame = 3
Query:  129 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            YEL + +G G FAKV  A  +L G  VA+K+++KN + S   +  IK EI  ++ L H HI +LY VL T +KI+ V+E+  GGELF  I ++ R SE+ +R  F+Q++SAV Y HS+G  HRDLKPENLL DE   LK+ DFGL A K +   D  L T CG+ AY APE++  K Y G++ D+WS G++L+VL  G+LPF+D N+M++YKKI +G++  PKW+              +P+ RI++
Sbjct:   11 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD--LPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISM 254          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK4_MOUSE (MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus GN=Mark4 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.033e-54
Identity = 111/266 (41.73%), Postives = 163/266 (61.28%), Query Frame = 3
Query:   72 RHNVSENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            R++++  P  Q      G Y L + +G G FAKV  AR +L GR VA+K+I+K ++  S+L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+   GE+F   ++ GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD   N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M              NP  R T+
Sbjct:   43 RNSIASCPEEQPH---VGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSL-QKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFS---NEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCESILRRFLVLNPAKRCTL 301          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.033e-54
Identity = 111/266 (41.73%), Postives = 163/266 (61.28%), Query Frame = 3
Query:   72 RHNVSENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            R++++  P  Q      G Y L + +G G FAKV  AR +L GR VA+K+I+K ++  S+L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+   GE+F   ++ GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD   N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M              NP  R T+
Sbjct:   43 RNSIASCPEEQPH---VGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSL-QKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFS---NEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCESILRRFLVLNPAKRCTL 301          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK1_RAT (Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.033e-54
Identity = 108/227 (47.58%), Postives = 153/227 (67.40%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 800
            G Y L K +G G FAKV  AR VL GR VAVK+I+K ++  ++L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:   58 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRVPFYM 280          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK1_MOUSE (Serine/threonine-protein kinase MARK1 OS=Mus musculus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.033e-54
Identity = 108/227 (47.58%), Postives = 153/227 (67.40%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 800
            G Y L K +G G FAKV  AR VL GR VAVK+I+K ++  ++L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:   58 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRVPFYM 280          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.349e-54
Identity = 109/249 (43.78%), Postives = 158/249 (63.45%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G Y L K +G G FAKV  AR +L GR VA+K+I+K ++  ++L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y +ME+  GGE+F   +A GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M              NP  R T+
Sbjct:   54 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKITDFGFS---NEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPVKRGTL 298          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.349e-54
Identity = 109/249 (43.78%), Postives = 158/249 (63.45%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G Y L K +G G FAKV  AR +L GR VA+K+I+K ++  ++L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y +ME+  GGE+F   +A GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M              NP  R T+
Sbjct:   54 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPVKRGTL 298          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK1_HUMAN (Serine/threonine-protein kinase MARK1 OS=Homo sapiens GN=MARK1 PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.349e-54
Identity = 108/227 (47.58%), Postives = 153/227 (67.40%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 800
            G Y L K +G G FAKV  AR VL GR VAVK+I+K ++  ++L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:   58 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 280          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: PAR1_CAEEL (Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.762e-54
Identity = 108/246 (43.90%), Postives = 159/246 (64.63%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETR 857
            GKY+L K +G G FAKV  A+ V+ G  VA+K+I+K  +  S+L   + RE+ IM++L+HP+IVKLY+V+ T+  +Y V+E+  GGE+F   +A GR  E  +R  F+Q++SAV Y HS+ + HRDLK ENLLLD++ N+K++DFG S   +       L T CG+P Y APE+ S K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M              NP+ R
Sbjct:  168 GKYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSL-QKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQDMNIKIADFGFS---NTFSLGNKLDTFCGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLVINPQRR 409          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: PAR1_CAEBR (Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae GN=par-1 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.762e-54
Identity = 108/246 (43.90%), Postives = 159/246 (64.63%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETR 857
            GKY+L K +G G FAKV  A+ V+ G  VA+K+I+K  +  S+L   + RE+ IM++L+HP+IVKLY+V+ T+  +Y V+E+  GGE+F   +A GR  E  +R  F+Q++SAV Y HS+ + HRDLK ENLLLD++ N+K++DFG S   +       L T CG+P Y APE+ S K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M              NP+ R
Sbjct:  126 GKYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSL-QKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQDMNIKIADFGFS---NTFSLGNKLDTFCGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLVINPQRR 367          
The following BLAST results are available for this feature:
BLAST of FC877839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MELK_HUMAN3.550e-5545.34Maternal embryonic leucine zipper kinase OS=Homo s... [more]
MARK4_MOUSE1.033e-5441.73MAP/microtubule affinity-regulating kinase 4 OS=Mu... [more]
MARK4_HUMAN1.033e-5441.73MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
MARK1_RAT1.033e-5447.58Serine/threonine-protein kinase MARK1 OS=Rattus no... [more]
MARK1_MOUSE1.033e-5447.58Serine/threonine-protein kinase MARK1 OS=Mus muscu... [more]
MARK3_RAT1.349e-5443.78MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
MARK3_MOUSE1.349e-5443.78MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
MARK1_HUMAN1.349e-5447.58Serine/threonine-protein kinase MARK1 OS=Homo sapi... [more]
PAR1_CAEEL1.762e-5443.90Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
PAR1_CAEBR1.762e-5443.90Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA65DB09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877839 ID=FC877839; Name=FC877839; organism=Citrus clementina; type=EST; length=867bp
ATTTTTATTCTTCGTTAGCTTTGTCATCTTCATCGCCTCAGGTTCGATCT
CTGGTTATGTCAGAGATCGAACGACACAATGTTTCAGAAAATCCTCGCGC
CCAGGCCGCCAATGCCTTGTTCGGGAAGTACGAGCTGGGCAAGCTCCTGG
GCTGCGGGGCCTTTGCTAAAGTCTATCACGCGCGCGACGTCCTCAACGGA
CGCAGCGTCGCAGTCAAAGTGATTAACAAGAACAAGATCATGTCCTCCAA
TTTAGTCTCCAACATCAAGCGAGAAATCTCCATCATGCGCCGTTTGAACC
ACCCTCACATCGTCAAGCTCTACGAGGTCTTAGCCACCAAGTCCAAGATT
TACTGCGTCATGGAGTTCGTCAAAGGCGGCGAGCTCTTCGCGAAGATCGC
CAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAAGTACTTCCAGCAACTCA
TATCCGCCGTCGGATATTGCCACTCGCGCGGAGTCTTCCACCGCGACTTG
AAGCCGGAGAACCTTTTGCTGGACGAGAACGGGAATTTAAAAGTCTCGGA
TTTCGGACTCAGCGCCGTGAAGGATCAGATTCGTACGGACGGGCTGTTGC
ACACGCTTTGTGGGACCCCTGCTTACGTGGCACCGGAGATTTTGTCTAAG
AAGGGATACGATGGAGCTAAGGTCGACTTGTGGTCATGCGGCGTCATTTT
GTTCGTATTGACGGCAGGTTACCTGCCGTTTAACGATCCGAATTTGATGA
GCATGTATAAGAAGATATATAAAGGTGAATTTCGGTGCCCTAAATGGATG
TCTAGCGATCTGAGACGGCTTTTGTCGCGACTTCTTGATACAAATCCAGA
GACGAGGATCACCGTTG
back to top