FC877839

Overview
NameFC877839
Unique NameFC877839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.301e-54
Identity = 111/249 (44.58%), Postives = 158/249 (63.45%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G Y L K +G G FAKV  AR +L G+ VAVK+I+K ++ SS+L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K  DG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M              NP  R T+
Sbjct:   51 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKIDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTL 295          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SIK2_CHICK (Serine/threonine-protein kinase SIK2 OS=Gallus gallus GN=SIK2 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.925e-54
Identity = 112/257 (43.58%), Postives = 157/257 (61.09%), Query Frame = 3
Query:   99 AQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            AQ      G Y++ + LG G FA V  AR  +    VA+K+I+K ++  SNL   I RE+ IM+ LNHPHI+KLY+V+ TK  +Y V EF K GE+F  + + G  SE  +RK F Q++SAV YCHS  + HRDLK ENLLLD N N+K++DFG     +  ++   L T CG+P Y APE+   K Y+G  +D+WS GV+L+VL  G LPF+ PNL ++ +++ +G FR P +M              +P  RIT+
Sbjct:   16 AQPRPLRVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDPSNL-EKIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDHLTSNGHLSESEARKKFWQILSAVEYCHSHHIVHRDLKTENLLLDANMNIKLADFGFG---NFYKSGEPLSTWCGSPPYAAPEVFEGKEYEGPHLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPYFMSEDCETLIRRMLVVDPTKRITI 268          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: BRSK1_MOUSE (BR serine/threonine-protein kinase 1 OS=Mus musculus GN=Brsk1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.925e-54
Identity = 102/249 (40.96%), Postives = 158/249 (63.45%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G Y L K LG G    V      + G+ VAVK++N+ K+ S +++  ++REI+I++ + HPH++KL++V   K  +Y V+E V GGELF  + K GR +   +RK+F+Q++SA+ +CHS  + HRDLKPENLLLDE  N++++DFG+++++     D LL T CG+P Y  PE++  + YDG + D+WSCGVILF L  G LPF+D NL  + +K+ +G F  P ++               PE R+++
Sbjct:   32 GPYRLEKTLGKGQTGLVKLGVHCITGQKVAVKIVNREKL-SESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIADFGMASLQVG---DSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVEPEKRLSL 276          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: BRSK1_HUMAN (BR serine/threonine-protein kinase 1 OS=Homo sapiens GN=BRSK1 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.126e-54
Identity = 101/249 (40.56%), Postives = 158/249 (63.45%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G Y L K LG G    V      + G+ VA+K++N+ K+ S +++  ++REI+I++ + HPH++KL++V   K  +Y V+E V GGELF  + K GR +   +RK+F+Q++SA+ +CHS  + HRDLKPENLLLDE  N++++DFG+++++     D LL T CG+P Y  PE++  + YDG + D+WSCGVILF L  G LPF+D NL  + +K+ +G F  P ++               PE R+++
Sbjct:   48 GPYRLEKTLGKGQTGLVKLGVHCITGQKVAIKIVNREKL-SESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIADFGMASLQVG---DSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVEPEKRLSL 292          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: AAPK1_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Caenorhabditis elegans GN=aak-1 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 6.694e-54
Identity = 105/225 (46.67%), Postives = 146/225 (64.89%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCP 791
            G + + + +G GAF  V     +  G  VA+K++N+ ++     V+  + EI  +++L HPHI +L+ V++T S I+ VME V GGELF+ I  KG      SR+YFQQ+IS V YCH+  + HRDLKPENLLLD N N+K++DFGLS       TDG LL T CG+P Y APE++S K Y G +VDLWSCGVIL+ +  G LPF+D N+ +++ KI  G +  P
Sbjct:   22 GNFVIKETIGKGAFGAVKRGTHIQTGYDVAIKILNRGRMKGLGTVNKTRNEIDNLQKLTHPHITRLFRVISTPSDIFLVMELVSGGELFSYITRKGALPIRESRRYFQQIISGVSYCHNHMIVHRDLKPENLLLDANKNIKIADFGLS----NYMTDGDLLSTACGSPNYAAPELISNKLYVGPEVDLWSCGVILYAMLCGTLPFDDQNVPTLFAKIKSGRYTVP 242          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SIK1_HUMAN (Serine/threonine-protein kinase SIK1 OS=Homo sapiens GN=SIK1 PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.544e-53
Identity = 108/249 (43.37%), Postives = 157/249 (63.05%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            G Y++ + LG G FA V  AR  +    VA+K+I+K ++ SSNL   I RE+ +M+ LNHPHI+KLY+V+ TK  +Y V EF K GE+F  + + G  SE+ +RK F Q++SAV YCH   + HRDLK ENLLLD N ++K++DFG     +  ++   L T CG+P Y APE+   K Y+G ++D+WS GV+L+VL  G LPF+ PNL ++ +++ +G FR P +M              +P  RIT+
Sbjct:   25 GFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNL-EKIYREVQLMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHDHHIVHRDLKTENLLLDGNMDIKLADFGFG---NFYKSGEPLSTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCESLIRRMLVVDPARRITI 269          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SIK2_HUMAN (Serine/threonine-protein kinase SIK2 OS=Homo sapiens GN=SIK2 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.263e-52
Identity = 108/264 (40.91%), Postives = 162/264 (61.36%), Query Frame = 3
Query:   81 VSENPR-AQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            +++ PR  Q      G Y++   LG G FA V   R  +    VA+K+I+K+++ + NL   I RE+ IM+ L+HPHI+KLY+V+ TKS +Y V E+ K GE+F  +A  GR +E  +R+ F Q++SAV YCH R + HRDLK ENLLLD N N+K++DFG     +  ++  LL T CG+P Y APE+   + Y+G ++D+WS GV+L+VL  G LPF+ P L  + +++ +G FR P +M              +P  R+T+
Sbjct:    3 MADGPRHLQRGPVRVGFYDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDKSQLDAVNL-EKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNIKIADFGFG---NFFKSGELLATWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLTI 262          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: BRSK2_MOUSE (BR serine/threonine-protein kinase 2 OS=Mus musculus GN=Brsk2 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.649e-52
Identity = 99/227 (43.61%), Postives = 151/227 (66.52%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 800
            G Y L K LG G    V      +  + VA+K++N+ K+ S +++  ++REI+I++ + HPH++KL++V   K  +Y V+E V GGELF  + K GR +   +RK+F+Q+ISA+ +CHS  + HRDLKPENLLLDE  N++++DFG+++++     D LL T CG+P Y  PE++  + YDG K D+WSCGVILF L  G LPF+D NL  + +K+ +G F  P ++
Sbjct:   18 GPYRLEKTLGKGQTGLVKLGIHCVTCQKVAIKIVNREKL-SESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDERNNIRIADFGMASLQVG---DSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFI 240          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: BRSK2_HUMAN (BR serine/threonine-protein kinase 2 OS=Homo sapiens GN=BRSK2 PE=1 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 1.649e-52
Identity = 99/227 (43.61%), Postives = 151/227 (66.52%), Query Frame = 3
Query:  123 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 800
            G Y L K LG G    V      +  + VA+K++N+ K+ S +++  ++REI+I++ + HPH++KL++V   K  +Y V+E V GGELF  + K GR +   +RK+F+Q+ISA+ +CHS  + HRDLKPENLLLDE  N++++DFG+++++     D LL T CG+P Y  PE++  + YDG K D+WSCGVILF L  G LPF+D NL  + +K+ +G F  P ++
Sbjct:   17 GPYRLEKTLGKGQTGLVKLGVHCVTCQKVAIKIVNREKL-SESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDEKNNIRIADFGMASLQVG---DSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFI 239          
BLAST of FC877839 vs. ExPASy Swiss-Prot
Match: SIK2_MOUSE (Serine/threonine-protein kinase SIK2 OS=Mus musculus GN=Sik2 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.153e-52
Identity = 109/264 (41.29%), Postives = 161/264 (60.98%), Query Frame = 3
Query:   81 VSENPR-AQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWMXXXXXXXXXXXXXTNPETRITV 866
            +++ PR  Q      G Y++   LG G FA V   R       VA+K+I+K+++ + NL   I RE+ IM+ L+HPHI+KLY+V+ TKS +Y V E+ K GE+F  +A  GR +E  +R+ F Q++SAV YCH R V HRDLK ENLLLD N N+K++DFG     +  +T  LL T CG+P Y APE+   + Y+G ++D+WS GV+L+VL  G LPF+ P L  + +++ +G FR P +M              +P  R+++
Sbjct:    3 MADGPRHLQRGPVRVGFYDIEGTLGKGNFAVVKLGRHRTTKTEVAIKIIDKSQLDAVNL-EKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKVVHRDLKAENLLLDNNMNIKIADFGFG---NFFKTGELLATWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLSI 262          
The following BLAST results are available for this feature:
BLAST of FC877839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MARK2_MOUSE2.301e-5444.58Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]
SIK2_CHICK3.925e-5443.58Serine/threonine-protein kinase SIK2 OS=Gallus gal... [more]
BRSK1_MOUSE3.925e-5440.96BR serine/threonine-protein kinase 1 OS=Mus muscul... [more]
BRSK1_HUMAN5.126e-5440.56BR serine/threonine-protein kinase 1 OS=Homo sapie... [more]
AAPK1_CAEEL6.694e-5446.675'-AMP-activated protein kinase catalytic subunit ... [more]
SIK1_HUMAN2.544e-5343.37Serine/threonine-protein kinase SIK1 OS=Homo sapie... [more]
SIK2_HUMAN1.263e-5240.91Serine/threonine-protein kinase SIK2 OS=Homo sapie... [more]
BRSK2_MOUSE1.649e-5243.61BR serine/threonine-protein kinase 2 OS=Mus muscul... [more]
BRSK2_HUMAN1.649e-5243.61BR serine/threonine-protein kinase 2 OS=Homo sapie... [more]
SIK2_MOUSE2.153e-5241.29Serine/threonine-protein kinase SIK2 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA65DB09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877839 ID=FC877839; Name=FC877839; organism=Citrus clementina; type=EST; length=867bp
ATTTTTATTCTTCGTTAGCTTTGTCATCTTCATCGCCTCAGGTTCGATCT
CTGGTTATGTCAGAGATCGAACGACACAATGTTTCAGAAAATCCTCGCGC
CCAGGCCGCCAATGCCTTGTTCGGGAAGTACGAGCTGGGCAAGCTCCTGG
GCTGCGGGGCCTTTGCTAAAGTCTATCACGCGCGCGACGTCCTCAACGGA
CGCAGCGTCGCAGTCAAAGTGATTAACAAGAACAAGATCATGTCCTCCAA
TTTAGTCTCCAACATCAAGCGAGAAATCTCCATCATGCGCCGTTTGAACC
ACCCTCACATCGTCAAGCTCTACGAGGTCTTAGCCACCAAGTCCAAGATT
TACTGCGTCATGGAGTTCGTCAAAGGCGGCGAGCTCTTCGCGAAGATCGC
CAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAAGTACTTCCAGCAACTCA
TATCCGCCGTCGGATATTGCCACTCGCGCGGAGTCTTCCACCGCGACTTG
AAGCCGGAGAACCTTTTGCTGGACGAGAACGGGAATTTAAAAGTCTCGGA
TTTCGGACTCAGCGCCGTGAAGGATCAGATTCGTACGGACGGGCTGTTGC
ACACGCTTTGTGGGACCCCTGCTTACGTGGCACCGGAGATTTTGTCTAAG
AAGGGATACGATGGAGCTAAGGTCGACTTGTGGTCATGCGGCGTCATTTT
GTTCGTATTGACGGCAGGTTACCTGCCGTTTAACGATCCGAATTTGATGA
GCATGTATAAGAAGATATATAAAGGTGAATTTCGGTGCCCTAAATGGATG
TCTAGCGATCTGAGACGGCTTTTGTCGCGACTTCTTGATACAAATCCAGA
GACGAGGATCACCGTTG
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