FC877844

Overview
NameFC877844
Unique NameFC877844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length929
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INV1_HANAN (Invertase OS=Hansenula anomala GN=INV1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.087e-12
Identity = 48/159 (30.19%), Postives = 75/159 (47.17%), Query Frame = 3
Query:  366 RPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHIN-WGN-ISWGQATSKDLIHWEDHVG----WEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVIRVTAN 824
            RPQ H     GW NDP G  YD    L+++ +Q +P   + W   ++WG +TSKDL+ W+ H        D E +  G       N  G F+ +  P       +  ++  YT+ ++L T            Q +AYS D G ++ +Y+ NPVI V ++
Sbjct:   28 RPQIHLTPDQGWMNDPNGMFYDRKDKLWHVYFQHNPDKKSIWATPVTWGHSTSKDLLTWDYHGNALEPENDDEGIFSGSVVVDRNNTSGFFNDSTDP-------EQRIVAIYTNNAQLQT------------QEIAYSLDKGYSFIKYDQNPVINVNSS 167          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INV1_MAIZE (Beta-fructofuranosidase 1 OS=Zea mays GN=IVR1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 40/114 (35.09%), Postives = 57/114 (50.00%), Query Frame = 3
Query:  345 NSLFTRWRPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGNISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYT 686
            N++    R   HF  P  W NDP G +Y   +  Y+L YQW+P    WGNI+WG A S+DL+HW           L L    +  Y+  G++SG+A  +      DG ++  YT
Sbjct:  118 NAMLAWQRTAFHFQPPKNWMNDPNGPLYH--KGWYHLFYQWNPDSAVWGNITWGHAVSRDLLHWLH---------LPLAMVPDHPYDANGVWSGSATRL-----PDGRIVMLYT 215          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: BFRA_THEMA (Beta-fructosidase OS=Thermotoga maritima GN=bfrA PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.131e-12
Identity = 48/149 (32.21%), Postives = 72/149 (48.32%), Query Frame = 3
Query:  363 WRPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGNISWGQATSKDLIHWEDHVGWEDAEALTLGPTGNGTYNGLGIFSGTAQPVNLQGKTDGTLLNFYTSVSRLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVI 809
            ++P  HF    GW NDP G ++   +  Y++ YQ++P+   WGNI WG A S DL+HW  H+       + L P         G+FSG+A       + DG +   YT   R PT     +  G +       ++ GL + +Y+ NPVI
Sbjct:    2 FKPNYHFFPITGWMNDPNGLIF--WKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWR-HL------PVALYPDDETH----GVFSGSAV------EKDGKMFLVYT-YYRDPT-----HNKGEKETQCVAMSENGLDFVKYDGNPVI 125          
BLAST of FC877844 vs. ExPASy Swiss-Prot
Match: INVX_SCHPO (Putative invertase OS=Schizosaccharomyces pombe GN=SPAC8E11.01c PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 3
Query:  366 RPQNHFIAPAGWSNDPCGAMYDPTRDLYYLSYQWHPQHINWGNISWGQATSKDLIHWEDHVGWEDAEALTLGPTG--NGTYNGLGIFSGTA--QPVNLQGKTDGTLLNFYTSVS-----RLPTSWTLPYLLGTESQSLAYSTDGGLTYKEYENNPVIRV 815
            RP  HF  P G+ NDP G +Y   +  ++L +QW+P     GN  WG A SK+L  W+            L PT    G  +GL +FSG+A     N  G  +     F++  S     R+   +T  Y    E+Q++AYS DGG+T+ +Y+ NP++ +
Sbjct:    4 RPCIHFTPPEGFMNDPNGLVYSNGK--WHLFFQWNPTGNQAGNQHWGHAVSKNLYKWK------------LLPTALAPGDDHGL-MFSGSAVIDKTNSSGFFES---GFFSRKSVDPEERIVLIYTTHYD-NRETQNIAYSLDGGITFIKYKKNPILDI 143          
The following BLAST results are available for this feature:
BLAST of FC877844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
INV1_HANAN1.087e-1230.19Invertase OS=Hansenula anomala GN=INV1 PE=3 SV=1[more]
INV1_MAIZE1.420e-1235.09Beta-fructofuranosidase 1 OS=Zea mays GN=IVR1 PE=3... [more]
BFRA_THEMA4.131e-1232.21Beta-fructosidase OS=Thermotoga maritima GN=bfrA P... [more]
INVX_SCHPO2.677e-1133.33Putative invertase OS=Schizosaccharomyces pombe GN... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27DH01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27DH01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877844 ID=FC877844; Name=FC877844; organism=Citrus clementina; type=EST; length=929bp
ATCTTGTCTTCTGTGTTTCGTGTGTACCAATCAGGCCAACCCTTCGTAAC
CTGAACATCATGCGTACGACACTTGCATCTGCTTCGGTCCTGGCCATTGT
GCCAGCGGCTCTGGGCCAGCATCAAGGTTCCCCTGGCGGACCTGGCGGCT
CAGGCTCATGGTGGGGCAGCTGGGGCGGTGGTGCTCCAACATGGGGACCG
CAAGGCTGGGGCGGAGGACGGGGAGGACGCCCTTCGAGTGTGGCATCGTC
AGCGCCGACTTCGACCTCGGCAGCGCCAGCAGGCCCGAGCAGCACTCAAA
GCTGTGCGGTACTGACTGCAGACGCAATCAACTCGATGGGCAACAACTCT
CTATTCACTCGCTGGAGACCTCAGAACCACTTCATTGCCCCGGCAGGATG
GTCAAATGACCCTTGTGGAGCCATGTACGACCCTACCCGTGATCTTTACT
ACCTCTCCTACCAATGGCACCCTCAGCACATCAACTGGGGTAACATCAGC
TGGGGTCAGGCAACGAGCAAAGACCTGATTCACTGGGAGGATCACGTCGG
CTGGGAGGACGCTGAGGCCCTGACCCTCGGCCCTACCGGCAACGGTACAT
ACAACGGACTCGGTATCTTCTCCGGTACTGCGCAGCCCGTCAACCTCCAG
GGCAAAACCGACGGTACCCTGCTCAACTTCTACACCTCCGTCAGCCGTCT
CCCGACGAGCTGGACTCTGCCGTACCTGCTGGGTACCGAATCCCAGAGTC
TGGCCTACAGCACCGATGGCGGTCTGACCTACAAGGAGTACGAGAACAAC
CCGGTCATCCGTGTCACCGCCAACACAGCACCAATGTACTGGAACATCAC
AGGTTTCCGTGACTCATTCTTCGAGACTCTGCCCGAGCTCGATGCTGCGC
TTGGCGCGTCTGAGCTTCAATACTATGCT
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