FC877845

Overview
NameFC877845
Unique NameFC877845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.005e-29
Identity = 66/149 (44.30%), Postives = 87/149 (58.39%), Query Frame = 3
Query:  438 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            +DLP   DWRE GAV PVK+QG CGSCW+FST  A+EG N + TG L+SLSEQQLVDC          + + GC GG MN AF++ +  GG+  EE YPY G D    C    +    S+ ++  V    +Q     V N P++V ++A
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCT---------TANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQD--GICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDA 138          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.843e-29
Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 3
Query:  444 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            +P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVD             + GCNGGLM++AF+Y  + GGL  EE YPY  TD   +C +     AA    F  +   E  +   +   GP++VAI+A
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRP-------QGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDT--SCNYKPEYSAAKDTGFVDIPQREKALMKAVATVGPISVAIDA 138          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.338e-28
Identity = 75/186 (40.32%), Postives = 103/186 (55.38%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 737
            F  +  K  K Y S  E +RR TIF+ NLR    R   + S   G+ +F+DL+  E+     G   R  R       +    T+D   LP   DWR +GAV  VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E         ++GC GG + +A+E+ +  GGL  + DYPY
Sbjct:   56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPY 232          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.747e-28
Identity = 83/246 (33.74%), Postives = 124/246 (50.41%), Query Frame = 3
Query:  168 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDA---DQAPILPTND-----LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAIN 881
            DL  ++  F  F  K+NK Y S EE   +   FK NL+    +      A   + ++SDL      R   G R  L+    A    +  ++   D     LP   DWR+K  V PVK+Q  CGSCW+FST   +E    +   K ++LSEQ LV+CD         + ++GC GGLM+ A E  L+ GG++  E+ PY G D    CK    +++ S +   V+  +E+++   LV NGP++VAI+
Sbjct:   24 DLNNSDELFKNFAIKYNKTYVSDEERAIKLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD---------NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFD--GVCKKSPFELSISGSRRYVLQ-NENKLRELLVVNGPISVAID 257          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.282e-28
Identity = 84/234 (35.90%), Postives = 116/234 (49.57%), Query Frame = 3
Query:  201 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKL--RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            ++ K  KAY   EE  RR  +++ N +             H  T     F DLT  EF +   G RR+   R+    D   +     +P   DWR  G V PVK+QG C S W+FS TG+LEG  F  TG+LV LSEQ L+DC          +    C+GG M +AF+Y    GGL  EE YPY G   G  C++     AA+V +F  +   E+ +   + K GP++VA++A
Sbjct:   32 WRTKHGKAYNVNEERLRR-AVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVFQDHQFLY----VPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDC-------MGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGP--GRKCRYHAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVDA 251          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.084e-28
Identity = 87/244 (35.66%), Postives = 120/244 (49.18%), Query Frame = 3
Query:  165 NDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGV--TQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVG--PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            +D +   + ++ +K K+N+ Y SQ +   RF +F  NL      Q    SAT+ +   QF+D++  EF  TYL LR       +A  A         A+ DW +   V    VK+QGSCGSCW+FS  GALE    +   K   LSEQ LVDC    D E       GCNGG M+SAFEY +   GL   +DYPYT  D    CK    +    V  F+   +D     A  ++   ++VA++A
Sbjct:   17 SDEIDTANLYANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLRVPKTAKLNASNANFQYKG---AEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNE-------GCNGGWMDSAFEY-VADNGLAEAKDYPYTAKD--GTCKTSVKRPYTHVQGFT--DIDSCDELAQAIQERTVSVAVDA 245          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27
Identity = 80/233 (34.33%), Postives = 115/233 (49.36%), Query Frame = 3
Query:  201 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRR-KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            ++ K  K Y   EE  +R  +++ N +             H  T     F DLT  EF +   G +R K++          L    +P   DWR+ G V PVK+QG C S W+FS TG+LEG  F  T +L+ LSEQ L+DC          +   GC+GG M  AF+Y    GGL  EE YPY G  +G  C++     AA+V +F  +   E+ +   + K GP++VA++A
Sbjct:   32 WRTKHGKTYNMNEERLKR-AVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLY---VPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDC-------MGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRG--QGRECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDA 251          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27
Identity = 83/247 (33.60%), Postives = 115/247 (46.56%), Query Frame = 3
Query:  159 TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            + NDL   E    LF+    K NK Y + +E   RF IFK NL+      K + S   G+  F+D++  EF+  Y G         +     +L   D  +P   DWR+KGAV PVK+QGSCGSCW+FS    +EG   + TG L   SEQ+L+DCD             GCNGG   SA +   +  G+     YPY G  R +    +K   AA       V    +    + + N P++V + A
Sbjct:   34 SQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQR-YCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEA 269          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.932e-27
Identity = 74/237 (31.22%), Postives = 117/237 (49.37%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAAR-RQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-----PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            F  +  ++ + Y   +E   RF IFK N+        +   S T G+ QF+D+T  EF   Y GL     LP +  + P++  +D+     P   DWR+ GAV  VK+QG CGSCW+F++   +E    +  G LVSLSEQQ++DC          +   GC GG +N A+ + +   G+     YPY        CK +    +A +  ++ V  + ++   + V N P+A A++A
Sbjct:   37 FEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLS----LPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC----------AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAK--GTCKTNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAALDA 257          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.523e-27
Identity = 82/249 (32.93%), Postives = 118/249 (47.39%), Query Frame = 3
Query:  159 TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPK---DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACK-FDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            + +DL   E    LF     K NK Y S +E   RF IF+ NL       K + S   G+  F+DL+  EF++ Y+G   +        D +        + P   DWR KGAV PVK+QG+CGSCW+FST   +EG N + TG L+ LSEQ+LVDCD             GC GG   ++ +Y     G+   + YPY    + + C+  DK      +  +  V  + +      + N PL+V + A
Sbjct:   34 SQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKH---------SYGCKGGYQTTSLQYVAN-NGVHTSKVYPYQA--KQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEA 270          
The following BLAST results are available for this feature:
BLAST of FC877845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CPGP2_ZINOF6.005e-2944.30Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CATL1_SHEEP7.843e-2946.94Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CPR4_ARATH1.338e-2840.32Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATV_GVCP1.747e-2833.74Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
TEST2_MOUSE2.282e-2835.90Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATL2_PARTE5.084e-2835.66Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
TEST2_RAT1.133e-2734.33Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
PAPA1_CARPA1.133e-2733.60Papain OS=Carica papaya PE=1 SV=1[more]
ANAN_ANACO1.932e-2731.22Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
PAPA2_CARPA2.523e-2732.93Chymopapain OS=Carica papaya PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA65DB10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877845 ID=FC877845; Name=FC877845; organism=Citrus clementina; type=EST; length=893bp
CATTGTCTAAAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCT
CTCGTCGTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGA
TCAGCTGATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACC
ACGAGAGCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTA
TTCAAGAAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCG
TAGGTTCACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGA
AGCTCGACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACT
CCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCT
GCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGG
CGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAG
GGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGG
TGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGC
TTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGAT
TCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAA
GGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATC
GTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCC
AACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCCATCTTGT
GAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATG
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