FC877845

Overview
NameFC877845
Unique NameFC877845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.880e-31
Identity = 89/241 (36.93%), Postives = 123/241 (51.04%), Query Frame = 3
Query:  183 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAAHLVKNGPLAVAIN 881
            +HH+ L+KK   +    Q E D R  I++ NL+             H    G+    D+TP E     +G    LR+P+  +++  L ++    LP   DWREKG V  VK QGSCGSCW+FS  GALEG   L TGKLVSLS Q LVDC  E   E+ G  + GC GG M  AF+Y +    +  E  YPY   D    C +D    AA+ + +  +   DE+ +   +   GP++V I+
Sbjct:   23 DHHWDLWKKTRMRRNTDQNEEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEV----IGYMGSLRIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTE---EKYG--NKGCGGGFMTEAFQYIIDT-SIDSEASYPYKAMD--EKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGID 251          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 135.961 bits (341), Expect = 2.880e-31
Identity = 81/227 (35.68%), Postives = 117/227 (51.54%), Query Frame = 3
Query:  210 KFNKAYASQEEHDRRFTIFKANLRRAARRQK-LDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            K+ K+Y S  E +RRF IFK  LR         + S   G+ QF+DLT  EFR TYL         K +++        LP+  DWR  GAV  +K QG CG CW+FS    +EG N + TG L+SLSEQ+L+DC    +         GCNGG +   F++ +  GG+  EE+YPYT  D    C  D +++   ++  +  V  + +      V   P++VA++A
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD--GECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDA 265          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.416e-31
Identity = 74/147 (50.34%), Postives = 90/147 (61.22%), Query Frame = 3
Query:  447 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKN-GPLAVAINA 884
            P   DWREKG V PVKDQG CGSCW+FSTTGALEG +F   GKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    GG+  EE YPYT  D    C++     AA+   F  +    ++     V + GP++VAI+A
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSR---PEG----NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKD-DEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDA 140          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.380e-31
Identity = 75/186 (40.32%), Postives = 104/186 (55.91%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 737
            F  +  K  K Y S  E +RR TIF+ NLR    R   + S   G+T F+DL+  E++    G      R       +D+      + LP   DWR +GAV  VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E         ++GC GG + +A+E+ +K GGL  + DYPY
Sbjct:   49 FESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYPY 225          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.380e-31
Identity = 81/233 (34.76%), Postives = 123/233 (52.79%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLD-PSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWRE-KGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAIN 881
            F LF+ +FN++Y +  E+ RR +IF  NL +A R Q+ D  +A  G T FSDLT  EF + Y   R   R P    +       + +P   DWR+ K  +  VK+QGSC  CW+ +    ++    +   + V +S Q+L+DC+          C +GCNGG +  A+   L   GL  E+DYP+ G  + H C   K K  A + +F+++S +E  IA +L  +GP+ V IN
Sbjct:   40 FKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLYGQERSPERTPNMTKKVESNTWGESVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCER---------CGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTIN 263          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.438e-30
Identity = 82/233 (35.19%), Postives = 120/233 (51.50%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLD-PSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWRE-KGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAIN 881
            F+LF+ ++N++Y++ EE+ RR  IF  NL +A + ++ D  +A  GVT FSDLT  EF R Y   R     PK   +       + +P   DWR+  G +  VK Q SC  CW+ +  G +E    +   + V LS Q+L+DC         G C  GC GG +  AF   L   GL  E+DYP+ G  + H C   K    A + +F ++  +E +IA +L   GP+ V IN
Sbjct:   42 FTLFQIQYNRSYSNPEEYARRLDIFAHNLAQAQQLEEEDLGTAEFGVTPFSDLTEEEFGRLYGHRRMDGEAPKVGREVGSEEWGESVPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDC---------GRCGDGCRGGFVWDAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTIN 265          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.432e-30
Identity = 82/251 (32.67%), Postives = 127/251 (50.60%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKAN---LRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL----------PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDE-------DQIAAHLVKNGPLAVAINA 884
            F L+K +  + Y + EE  +R  IFK N   +R     +K   S   G+ +F+D+TP EF + YL      + PKD  Q   +    +          PA +DWR+KG +  VK QG CG  W+FS TGA+E A+ +ATG LVSLSEQ+LVDC  E +         G   G    +FE+ L+ GG+  ++DYPY   +    CK +K +   ++  +  + + +       +Q     +   P++V+I+A
Sbjct:   44 FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYL------QAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEESE---------GSYNGWQYQSFEWVLEHGGIATDDDYPYRAKE--GRCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDA 277          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 3.521e-29
Identity = 79/197 (40.10%), Postives = 103/197 (52.28%), Query Frame = 3
Query:  159 TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP-TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 737
            + +DL   E    LF       NK Y + +E   RF IFK NL       K + S   G+ +F+DL+  EF   Y+G      + +  D+  I   T +LP + DWR+KGAV PV+ QGSCGSCW+FS    +EG N + TGKLV LSEQ+LVDC+             GC GG    A EY  K G  +R + YPY
Sbjct:   34 SQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR---------SHGCKGGYPPYALEYVAKNGIHLRSK-YPY 220          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.521e-29
Identity = 64/150 (42.67%), Postives = 93/150 (62.00%), Query Frame = 3
Query:  438 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHAC-KFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            + LP   DWREKG +  VKDQGSCGSCW+FS   A+E  N + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+ +K GG+  EEDYPY   +R   C ++ K+     + ++  V ++ ++     V + P+++A+ A
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPY--KERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEA 155          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 4.598e-29
Identity = 80/202 (39.60%), Postives = 104/202 (51.49%), Query Frame = 3
Query:  159 TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI------LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 737
            + +DL   E    LF     K NK Y + +E   RF IFK NL+    R K+      G+ +FSDL+  EF+  Y+G      LP+D    P           DLP   DWR KGAV PVK QG C SCW+FST   +EG N + TG LV LSEQ+LVDCD +           GCN G  +++ +Y  + G  +R + YPY
Sbjct:   34 SQDDLTSTERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVG-----SLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ---------SYGCNRGYQSTSLQYVAQNGIHLRAK-YPY 220          
The following BLAST results are available for this feature:
BLAST of FC877845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATS_RAT2.880e-3136.93Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
ACTN_ACTCH2.880e-3135.68Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATL1_CHICK6.416e-3150.34Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CPR3_ARATH8.380e-3140.32Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CATW_MOUSE8.380e-3134.76Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATW_FELCA2.438e-3035.19Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
P34_SOYBN5.432e-3032.67P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
PAPA3_CARPA3.521e-2940.10Caricain OS=Carica papaya PE=1 SV=2[more]
CYSPL_SOLLC3.521e-2942.67Low-temperature-induced cysteine proteinase (Fragm... [more]
PAPA4_CARPA4.598e-2939.60Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA65DB10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877845 ID=FC877845; Name=FC877845; organism=Citrus clementina; type=EST; length=893bp
CATTGTCTAAAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCT
CTCGTCGTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGA
TCAGCTGATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACC
ACGAGAGCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTA
TTCAAGAAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCG
TAGGTTCACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGA
AGCTCGACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACT
CCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCT
GCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGG
CGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAG
GGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGG
TGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGC
TTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGAT
TCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAA
GGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATC
GTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCC
AACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCCATCTTGT
GAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATG
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