FC877880

Overview
NameFC877880
Unique NameFC877880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length881
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.471e-43
Identity = 101/244 (41.39%), Postives = 140/244 (57.38%), Query Frame = 2
Query:  158 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 871
            S++ + D  + A +  W   H + Y  + E+  R  ++++N++ I+ HN E    K G    +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  NEGCNGGLMD AF ++ DNGG+D+EE YPY   D     Y+          + D+P   EKAL KAVA   P+SVAI+
Sbjct:   16 SAAPKFDQSLNAQWYQWKATHRRLYG-MNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAID 251          
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.146e-43
Identity = 100/228 (43.86%), Postives = 143/228 (62.72%), Query Frame = 2
Query:  197 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 871
            F++W+V+H K Y++  E   R + F  NLR I+ HN+ N T+K+GLN+F+D++ +E +  +L +    +  +  + +SN YL   G   P S+DWRKKG  V  VK+QGSCGSCW FST  A+E    I TG L  L+EQ+LVDC  ++ N GC GGL   AFE+I  N GI  E+ YPY+  DG C  Y+ +  +  + D  ++ LNDE+A+ +AVA + PVS A E
Sbjct:   35 FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWS----EPQNCSATKSN-YLRGTGP-YPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDC-KYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFE 254          
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 9.332e-43
Identity = 95/234 (40.60%), Postives = 141/234 (60.26%), Query Frame = 2
Query:  197 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC--DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 871
            +E +  K G+ Y  L E+  R  +F +NL++I+E N +      TY + +N+F+D+TNE++ ++  G + G +  ++ +           +A P+S  VDWR KGAV  VKDQG CGSCWAFST   +EG + + TG L+SLSEQ+LVDC   + YN+GCNGG ++ A  ++ DNGG+DTE  YPY+A D +C  +  N    T   Y  +    E AL+ A  +  P+SVAI+
Sbjct:   20 WEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTST---------DAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTC-RFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAID 243          
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 9.332e-43
Identity = 98/230 (42.61%), Postives = 134/230 (58.26%), Query Frame = 2
Query:  197 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 871
            +E W   H K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC T  N GC GG M  AF+++  NGGID+E+ YPY   D SC  Y   AK      Y ++P+ +EKAL++AVA   P+SV+I+
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSY---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE-NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSID 250          
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.592e-42
Identity = 101/232 (43.53%), Postives = 137/232 (59.05%), Query Frame = 2
Query:  197 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 871
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250          
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.592e-42
Identity = 101/232 (43.53%), Postives = 137/232 (59.05%), Query Frame = 2
Query:  197 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 871
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250          
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.592e-42
Identity = 103/228 (45.18%), Postives = 138/228 (60.53%), Query Frame = 2
Query:  197 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEA-LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 871
            F  +  ++GK Y ++ E + RF +FKENL  I   N +  +YK+ LN+FADLT +E++   LGA   A+  S   K S++    + EA +PD+ DWR+ G V+ VK+QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GC+GGL   AFE+I  NGG+DTEE YPY   DG C    KN   V + D  ++ L  E  L+ AV   +PVSVA E
Sbjct:   59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGA---AQNCSATLKGSHK----ITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIG-VQVRDSVNITLGAEDELKHAVGLVRPVSVAFE 278          
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 2.079e-42
Identity = 100/232 (43.10%), Postives = 138/232 (59.48%), Query Frame = 2
Query:  197 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIE 871
            +E W   + K YN+ G++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +  A R+     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D +C  Y    K      Y ++P  +EKAL++AVA   P+SVAI+
Sbjct:   26 WELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASRS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAID 250          
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.715e-42
Identity = 100/246 (40.65%), Postives = 146/246 (59.35%), Query Frame = 2
Query:  140 KTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMH-LGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQK-AVANQPVSVAI 868
            KTH+  S  +   D+V  +F  + V+ G+ Y +  E++ R  IF++NL+ I+E N+ E  + K G+  FAD+T+ EY+    L  R  AK T      S   +P     LP   DWR+K AV +VK+QGSCGSCWAFS    +EG+  + TG L   SEQEL+DCDT+ +  CNGGLMD A++ I D GG++ E +YPYKA    C  + +    V +  + D+P  +E A+Q+  +AN P+S+ I
Sbjct:  292 KTHKKHSHRF---DKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGLWQRDEAKATG----GSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTT-DSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCH-FNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGI 528          
BLAST of FC877880 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.715e-42
Identity = 102/257 (39.69%), Postives = 149/257 (57.98%), Query Frame = 2
Query:  110 ALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIE 871
            A ++++ S++K H                F++W+V+H K Y+ L E   R ++F  N R I+ HN+ N T+K+GLN+F+D++ +E R  +L +          S     YL   G   P S+DWRKKG  V+ VK+QGSCGSCW FST  A+E    I TG ++SL+EQ+LVDC  ++ N GC GGL   AFE+I  N GI  E+ YPYK  D  C  ++ +  +  + D  ++ +NDE+A+ +AVA   PVS A E
Sbjct:   22 ASNLAVSSFEKLH----------------FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSE-----PQNCSATKGNYLRGTGP-YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHC-KFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFE 254          
The following BLAST results are available for this feature:
BLAST of FC877880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATL1_CANFA5.471e-4341.39Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATH_BOVIN7.146e-4343.86Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CYSP1_HOMAM9.332e-4340.60Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATK_MOUSE9.332e-4342.61Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATK_MACMU1.592e-4243.53Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.592e-4243.53Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
ALEUL_ARATH1.592e-4245.18Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATK_BOVIN2.079e-4243.10Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CPR1_DROME2.715e-4240.65Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATH_PIG2.715e-4239.69Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27DH08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27DH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877880 ID=FC877880; Name=FC877880; organism=Citrus clementina; type=EST; length=881bp
ATCTTCTTCTCCCAAAAAGAAAAAAAAAAAGTTCTTTTCTCAAAAGATGG
GTTTGTTTAGATCACCAACCATGGCCATGTTTTTACTTTTTCTCTTCACT
GTTTCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAAACCCATGA
GTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGCTATGTTCG
AGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAA
GAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGGTTTATTGATGAACA
TAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATT
TGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGCACGCTTTGGTGCT
AAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTTATCTGCCACGTGT
CGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCG
CTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACC
ATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTC
ACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGAT
GTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGA
GGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTG
TGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAG
ATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAA
CCCGTGAGTGTTGCCATTGAAAGGAGGTGGC
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