FC877910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_GEOKA (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus kaustophilus GN=clpP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV++G P+ V +V++L++L DP I LYINS G G + G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP + G A+++ I AK + RD L ++L Sbjct: 28 RIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPG---------GSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQG--QATEIEIAAKRILFLRDKLNRIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNSC (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9605) GN=clpP2 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 55/138 (39.86%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + +VA++++L+ DP+ IYLYINS G G +G I+DT+ +K +VHTV VG A M LL AGTKGKR + H++IMI QP + G ASD+ I+A E + ++ L K L Sbjct: 26 RIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPG---------GSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGAQG--QASDIRIQADEILFLKERLNKEL 152
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMP (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RI+++G + +VA+L++L+ DP+ IY+YINS G G +G I+DT+ +K ++HTV VG A M LLAAGTKGKR + H++IMI QP + G ASD+ I+A E + ++ L Sbjct: 26 RIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPG---------GSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARG--QASDIRIQADEILYLKERL 148
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_EUBE2 (ATP-dependent Clp protease proteolytic subunit OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=clpP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 52/138 (37.68%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+++G + LVVA++++L+ DP I+ YINS G G S GFAIYDT+ +KC+V T+ +G A M LL+ G KGKR +P+A+IMI QP + G +++ I A+ + R+ L ++L Sbjct: 28 RIIFLGEEVTDVSANLVVAQMLFLEAEDPSKDIHFYINSPG---------GSVSAGFAIYDTMQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEIMIHQPSGGARG--QETEIRIVAENILKTRNKLNEIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_DESRM (ATP-dependent Clp protease proteolytic subunit OS=Desulfotomaculum reducens (strain MI-1) GN=clpP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RI++IG P+ + LV+A+ ++L+ DP+ I+LYINS G G+ + G AIYDT+ +K V T+ +G A M LLAAG GKR+ +P A+IMI QP G A+D+ I AKE + +D L Sbjct: 29 RIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG---------GVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQPLGGVQG--QATDIDIHAKEILRMKDLL 151
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP2_CHLPN (ATP-dependent Clp protease proteolytic subunit 2 OS=Chlamydia pneumoniae GN=clpP2 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 54/139 (38.85%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS-DVLIRAKEAMVNRDTLVKLL 818 RIV IG + + V+A+L++L DPK I ++INS G G + G AIYDT+ + C+V+T +G A M LLL+AGTKGKR +PH+++MI Q PS G++ S D+ ++A E + + L +L Sbjct: 28 RIVMIGQEITEPLANTVIAQLLFLMSEDPKKDIQIFINSPG---------GYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRHALPHSRMMIHQ---PSGGIIGTSADIQLQAAEILTLKKHLANIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMT (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RIV++G P+ +VA+L++L+ DP I+LYINS G G +G I+DT+ +K ++HTV VG A M LL AG KGKR + H++IMI QP + G ASD+ I+A E + +D L K L Sbjct: 26 RIVFLGEPVTSDSANRIVAQLLFLEADDPDKDIFLYINSPG---------GSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLCAGAKGKRSSLLHSRIMIHQPLGGARG--QASDIRIQADEILFIKDKLNKEL 152
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP1_PROM9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 53/134 (39.55%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 806 RI+++G + +VA+L++L+ DP IY+YINS G G +G I+DT+ +K ++HTV VG A M LLAAGTKGKR + H++IMI QP + G ASD+ I+A E + ++ L Sbjct: 26 RIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPG---------GSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARG--QASDIRIQADEILFLKERL 148
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_SULDN (ATP-dependent Clp protease proteolytic subunit OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=clpP PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 53/138 (38.41%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+ + + AV +VA++++L+ DP+ IY YINS G G+ + G AIYDT+ ++ +V T+ VG A M LL++G KGKR+ +PHA+IMI QP + G A+D+ I+AKE + ++ L +L Sbjct: 28 RIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDIYFYINSPG---------GVVTAGMAIYDTMNYIRPDVATICVGQAASMGAFLLSSGAKGKRYALPHARIMIHQPLGGAQG--QATDIAIQAKEILRMKEELNAIL 154
BLAST of FC877910 vs. ExPASy Swiss-Prot
Match: CLPP_MACCJ (ATP-dependent Clp protease proteolytic subunit OS=Macrococcus caseolyticus (strain JCSC5402) GN=clpP PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 53/138 (38.41%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 405 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 818 RI+ +G + V +V++L++LQ D + IYLYINS G G + G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP + G A+++ I A+ + R+ L ++L Sbjct: 28 RIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------GSVTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQG--QATEIEIAARHILKTREKLNRIL 154 The following BLAST results are available for this feature:
BLAST of FC877910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877910 ID=FC877910; Name=FC877910; organism=Citrus clementina; type=EST; length=819bpback to top |