FC877918

Overview
NameFC877918
Unique NameFC877918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length870
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 4.459e-114
Identity = 188/228 (82.46%), Postives = 210/228 (92.11%), Query Frame = 1
Query:  187 DLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            +LD+ +E L +CK L E +V+ LCE+A+ IL +E NVQ V+CPVTVCGD+HGQFHDL+ELFRIGG +PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNANVWK+FTDLFDYLPLTAL++ Q+FCLHGGLSPS+DTLD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FNH NGLTL
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTL 236          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 4.459e-114
Identity = 188/228 (82.46%), Postives = 210/228 (92.11%), Query Frame = 1
Query:  187 DLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            +LD+ +E L +CK L E +V+ LCE+A+ IL +E NVQ V+CPVTVCGD+HGQFHDL+ELFRIGG +PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNANVWK+FTDLFDYLPLTAL++ Q+FCLHGGLSPS+DTLD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FNH NGLTL
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTL 236          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2A_DROME (Serine/threonine-protein phosphatase PP2A OS=Drosophila melanogaster GN=mts PE=1 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 5.824e-114
Identity = 189/228 (82.89%), Postives = 211/228 (92.54%), Query Frame = 1
Query:  187 DLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            DLD+ IE L +C  L E +V+ LC++A+ IL +E NVQ VKCPVTVCGD+HGQFHDL+ELFRIGG +PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR+RITILRGNHESRQITQVYGFYDECLRKYGNANVWK+FTDLFDYLPLTAL++ Q+FCLHGGLSPS+D+LD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FN+TNGLTL
Sbjct:    9 DLDQWIEQLNECNQLTETQVRTLCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDSLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNNTNGLTL 236          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2AA_CHICK (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 410.223 bits (1053), Expect = 7.606e-114
Identity = 188/228 (82.46%), Postives = 210/228 (92.11%), Query Frame = 1
Query:  187 DLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            +LD+ IE L +C+ L E +V+ LCE+A+ IL +E NVQ V+CPVTVCGD+HGQFHDL+ELFRIGG +PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNANVWK+FTDLFDYLPLTAL++ Q+FCLHGGLSPS+DTLD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FNH NGLTL
Sbjct:    9 ELDQWIEQLNECRQLSESQVRSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTL 236          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 3.775e-113
Identity = 187/230 (81.30%), Postives = 205/230 (89.13%), Query Frame = 1
Query:  181 QADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            Q +LD QI  LMQCKPL E +V+ LCE+A+ IL EE NVQPVK PVT+CGDIHGQFHDL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  R+TILRGNHESRQITQVYGFYDECLRKYGNANVWK FTDLFDY PLTAL+ES++FCLHGGLSPS++TLDN+R+ DR+QEVPHEG MCDLLWSDPDD CGWG+SPRGAGYTFGQDI+ QF+ TN L L
Sbjct:   12 QGNLDEQISQLMQCKPLSEPDVRALCEKAKEILAEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNVRSFDRVQEVPHEGAMCDLLWSDPDDCCGWGMSPRGAGYTFGQDISEQFHQTNNLKL 241          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2AA_DICDI (Serine/threonine-protein phosphatase 2A catalytic subunit A OS=Dictyostelium discoideum GN=pho2A PE=1 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 8.409e-113
Identity = 189/228 (82.89%), Postives = 208/228 (91.23%), Query Frame = 1
Query:  187 DLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            D+D+ I  L +CKPL E EV+ LCE+AR IL +E NVQPV+CPVTVCGDIHGQFHDL+ELF+IGGN PDTNYLFMGDYVDRG+YSVETVTLLVALKVRY+DR+TILRGNHESRQITQVYGFYDECLRKYGN NVWK FTDLFDYLPLTALIE+QVFCLHGGLSPS+DTLD+I  LDR+QEVPHEG MCDLLWSDPDDR G+G SPRGAGYTFG+DI+ QFNH NGLTL
Sbjct:    6 DVDKYISILKECKPLSESEVRDLCEKAREILSKESNVQPVRCPVTVCGDIHGQFHDLMELFKIGGNCPDTNYLFMGDYVDRGFYSVETVTLLVALKVRYKDRVTILRGNHESRQITQVYGFYDECLRKYGNPNVWKLFTDLFDYLPLTALIENQVFCLHGGLSPSIDTLDHIENLDRVQEVPHEGAMCDLLWSDPDDRLGFGYSPRGAGYTFGKDISEQFNHNNGLTL 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 403.675 bits (1036), Expect = 7.119e-112
Identity = 185/220 (84.09%), Postives = 204/220 (92.73%), Query Frame = 1
Query:  211 LMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            L +CK L E +V+ LCE+A+ IL +E NVQ V+CPVTVCGD+HGQFHDL+ELFRIGG +PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNANVWK+FTDLFDYLPLTAL++ Q+FCLHGGLSPS+DTLD+IRALDR+QEVPHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDI+  FNH NGLTL
Sbjct:    1 LNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTL 220          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2A2_SCHPO (Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa2 PE=2 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 4.614e-111
Identity = 180/228 (78.95%), Postives = 210/228 (92.11%), Query Frame = 1
Query:  187 DLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            D+DR IE L +C+PL E +V++LC++AR +L +E NVQPV+ PVTVCGDIHGQFHDL+ELF+IGG+ PD NYLFMGDYVDRGY+SVETV+LLVA+K+RY +RITILRGNHESRQITQVYGFYDECLRKYG+ANVWKHFT+LFDY PLTALIE ++FCLHGGLSPS+D+LD++R LDR+QEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDI+  FNH NGL+L
Sbjct:   22 DVDRWIEQLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANVWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISETFNHANGLSL 249          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2A_ACECL (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Acetabularia cliftonii PE=2 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.484e-109
Identity = 187/227 (82.38%), Postives = 201/227 (88.55%), Query Frame = 1
Query:  190 LDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            LD  IEHLMQCKPLPE+ VK L  +AR +   E NVQPVK PVTVCGDIHGQFHD+VELF+IGG  PDTNYLFMGDYVDRGY SVETVTLLV+LKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNANVW+ FTDLFD+LPLT LIE++VFCLHGGLSP+LDTLD IR LDRIQEVPHEGPMCDLLWSDPD+R GWGISPRGAGYTFGQDI+ QFN  N L L
Sbjct:    7 LDEWIEHLMQCKPLPEENVKELVAKAREVFSNEKNVQPVKMPVTVCGDIHGQFHDMVELFKIGGTCPDTNYLFMGDYVDRGYNSVETVTLLVSLKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWQLFTDLFDFLPLTGLIENEVFCLHGGLSPALDTLDQIRELDRIQEVPHEGPMCDLLWSDPDERLGWGISPRGAGYTFGQDISEQFNVRNSLKL 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2A1_SCHPO (Minor serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa1 PE=2 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 1.815e-107
Identity = 177/228 (77.63%), Postives = 203/228 (89.04%), Query Frame = 1
Query:  187 DLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            ++DR IE L +C+PL E++V  +C+ A+ +L  E NVQ V+CPVTVCGDIHGQFHDL+ELF IGG +PDTNYLFMGDYVDRGY+SVETV+LL+A K+RY  RITILRGNHESRQITQVYGFYDECLRKYGNANVW++FTDLFDYLPLTALIE ++FCLHGGLSPS+DTLD++R LDR+QEVPHEGP+CDLLWSDPDDR GWGISPRGAGYTFG DIA  FNH NGL L
Sbjct:    9 EVDRWIEQLSRCEPLSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLFMGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWSDPDDRPGWGISPRGAGYTFGPDIAEAFNHNNGLDL 236          
The following BLAST results are available for this feature:
BLAST of FC877918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
PP2AB_MOUSE4.459e-11482.46Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN4.459e-11482.46Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A_DROME5.824e-11482.89Serine/threonine-protein phosphatase PP2A OS=Droso... [more]
PP2AA_CHICK7.606e-11482.46Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A5_TOBAC3.775e-11381.30Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2AA_DICDI8.409e-11382.89Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_PIG7.119e-11284.09Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A2_SCHPO4.614e-11178.95Major serine/threonine-protein phosphatase PP2A-2 ... [more]
PP2A_ACECL1.484e-10982.38Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_SCHPO1.815e-10777.63Minor serine/threonine-protein phosphatase PP2A-1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ5YO10RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YO10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877918 ID=FC877918; Name=FC877918; organism=Citrus clementina; type=EST; length=870bp
CTGAGTTCGAGGGCCAAGGCAAATCCACTACCTTGTATCTCTCTTCAAAC
CCTAACCCTAATCGCAAATCTACGATGACCTGAACCTTCATCCAGCCCTC
ATTGCCCGTGCTCACGCTTCACTGTCCGATCACAGAATCATATCTAAAGG
CGTCGAACGAAATCTCAAACGATGCCGTCGCAGGCCGATCTGGACCGTCA
GATCGAGCACTTGATGCAGTGCAAGCCGTTGCCGGAACAGGAGGTAAAGA
TTTTGTGCGAGCAAGCGAGAGCTATTCTTGTGGAGGAATGGAACGTGCAA
CCCGTCAAATGCCCGGTCACCGTCTGCGGCGACATTCACGGACAGTTTCA
CGATCTCGTCGAGCTTTTTCGCATAGGTGGCAACGCTCCTGATACCAATT
ATCTCTTCATGGGCGACTATGTTGATCGTGGATACTACTCAGTAGAGACC
GTCACTCTTTTAGTTGCTCTGAAAGTACGTTATAGAGATAGAATAACAAT
TCTGAGGGGAAATCATGAGAGTCGTCAGATAACTCAAGTGTATGGATTTT
ATGATGAATGTTTGAGAAAATATGGAAATGCTAATGTCTGGAAGCATTTC
ACTGACCTTTTTGATTATCTGCCACTTACAGCTCTAATTGAGAGTCAGGT
TTTCTGCTTGCACGGAGGACTTTCCCCATCTTTGGATACATTAGATAATA
TACGTGCTCTGGACCGTATACAGGAGGTTCCTCATGAGGGCCCGATGTGT
GATCTCTTATGGTCTGATCCCGACGATCGATGTGGATGGGGAATATCTCC
TCGGGGTGCTGGGTACACATTTGGGCAGGATATAGCTTCACAGTTCAACC
ATACTAATGGGCTGACTCTT
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