FC877918

Overview
NameFC877918
Unique NameFC877918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length870
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2A1_YEAST (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH21 PE=1 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 3.203e-104
Identity = 170/227 (74.89%), Postives = 200/227 (88.11%), Query Frame = 1
Query:  190 LDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            LD+ IEHL +C+PL E +V  LC+ A  +L  E NV+P+  PVT+CGD+HGQFHDL+ELF+IGG  PDTNYLFMGDYVDRGYYSVETV+ LVA+KVRY  RITILRGNHESRQITQVYGFYDECLRKYG+ANVWK FTDLFDY P+TAL+++++FCLHGGLSP ++T+D +R L+RIQEVPHEGPMCDLLWSDPDDR GWGISPRGAG+TFGQD++ QFNHTN L+L
Sbjct:   70 LDQWIEHLSKCEPLSEDDVARLCKMAVDVLQFEENVKPINVPVTICGDVHGQFHDLLELFKIGGPCPDTNYLFMGDYVDRGYYSVETVSYLVAMKVRYPHRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPITALVDNKIFCLHGGLSPMIETIDQVRELNRIQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGFTFGQDVSEQFNHTNDLSL 296          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP2A2_YEAST (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH22 PE=1 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 4.183e-104
Identity = 171/227 (75.33%), Postives = 200/227 (88.11%), Query Frame = 1
Query:  190 LDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            LD+ IEHL +C+PL E +V  LC+ A  +L  E NV+P+  PVT+CGD+HGQFHDL+ELF+IGG  PDTNYLFMGDYVDRGYYSVETV+ LVA+KVRY  RITILRGNHESRQITQVYGFYDECLRKYG+ANVWK FTDLFDY P+TAL+++++FCLHGGLSP ++T+D +R L+RIQEVPHEGPMCDLLWSDPDDR GWGISPRGAG+TFGQDI+ QFNHTN L+L
Sbjct:   78 LDQWIEHLSKCEPLSEDDVARLCKMAVDVLQFEENVKPINVPVTICGDVHGQFHDLLELFKIGGPCPDTNYLFMGDYVDRGYYSVETVSYLVAMKVRYPHRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPVTALVDNKIFCLHGGLSPMIETIDQVRDLNRIQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGFTFGQDISEQFNHTNDLSL 304          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_RABIT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Oryctolagus cuniculus GN=PPP4C PE=1 SV=2)

HSP 1 Score: 357.451 bits (916), Expect = 5.851e-98
Identity = 161/233 (69.10%), Postives = 196/233 (84.12%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQIE L++C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +
Sbjct:    1 MAEISDLDRQIEQLLRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDM 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_DROME (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Drosophila melanogaster GN=Pp4-19C PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 7.641e-98
Identity = 161/233 (69.10%), Postives = 196/233 (84.12%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQIE L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELF++GG+ P+ NYLFMGD+VDRGYYSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+  LD IR++DR QEVPH+GPMCDLLWSDP+D+ GWG+SPRGAGY FG D+ SQFN TN + +
Sbjct:    1 MSDYSDLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSTAVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQYLDQIRSIDRKQEVPHDGPMCDLLWSDPEDQTGWGVSPRGAGYLFGSDVVSQFNRTNDIDM 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_XENTR (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus tropicalis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 9.980e-98
Identity = 161/233 (69.10%), Postives = 195/233 (83.69%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQIE L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +
Sbjct:    1 MTEISDLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANNIDM 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_XENLA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus laevis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 9.980e-98
Identity = 161/233 (69.10%), Postives = 195/233 (83.69%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQIE L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +
Sbjct:    1 MTEISDLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANNIDM 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_RAT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Rattus norvegicus GN=Ppp4c PE=1 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.303e-97
Identity = 161/233 (69.10%), Postives = 195/233 (83.69%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQIE L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +
Sbjct:    1 MAEISDLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDM 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_PONAB (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Pongo abelii GN=PPP4C PE=2 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.303e-97
Identity = 161/233 (69.10%), Postives = 195/233 (83.69%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQIE L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +
Sbjct:    1 MAEISDLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDM 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_MOUSE (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Mus musculus GN=Ppp4c PE=1 SV=2)

HSP 1 Score: 356.295 bits (913), Expect = 1.303e-97
Identity = 161/233 (69.10%), Postives = 195/233 (83.69%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQIE L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +
Sbjct:    1 MAEISDLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDM 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_HUMAN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Homo sapiens GN=PPP4C PE=1 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.303e-97
Identity = 161/233 (69.10%), Postives = 195/233 (83.69%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQIE L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +
Sbjct:    1 MAEISDLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDM 233          
The following BLAST results are available for this feature:
BLAST of FC877918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
PP2A1_YEAST3.203e-10474.89Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A2_YEAST4.183e-10475.33Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP4C_RABIT5.851e-9869.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_DROME7.641e-9869.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENTR9.980e-9869.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENLA9.980e-9869.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_RAT1.303e-9769.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_PONAB1.303e-9769.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_MOUSE1.303e-9769.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_HUMAN1.303e-9769.10Serine/threonine-protein phosphatase 4 catalytic s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAQ5YO10RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YO10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877918 ID=FC877918; Name=FC877918; organism=Citrus clementina; type=EST; length=870bp
CTGAGTTCGAGGGCCAAGGCAAATCCACTACCTTGTATCTCTCTTCAAAC
CCTAACCCTAATCGCAAATCTACGATGACCTGAACCTTCATCCAGCCCTC
ATTGCCCGTGCTCACGCTTCACTGTCCGATCACAGAATCATATCTAAAGG
CGTCGAACGAAATCTCAAACGATGCCGTCGCAGGCCGATCTGGACCGTCA
GATCGAGCACTTGATGCAGTGCAAGCCGTTGCCGGAACAGGAGGTAAAGA
TTTTGTGCGAGCAAGCGAGAGCTATTCTTGTGGAGGAATGGAACGTGCAA
CCCGTCAAATGCCCGGTCACCGTCTGCGGCGACATTCACGGACAGTTTCA
CGATCTCGTCGAGCTTTTTCGCATAGGTGGCAACGCTCCTGATACCAATT
ATCTCTTCATGGGCGACTATGTTGATCGTGGATACTACTCAGTAGAGACC
GTCACTCTTTTAGTTGCTCTGAAAGTACGTTATAGAGATAGAATAACAAT
TCTGAGGGGAAATCATGAGAGTCGTCAGATAACTCAAGTGTATGGATTTT
ATGATGAATGTTTGAGAAAATATGGAAATGCTAATGTCTGGAAGCATTTC
ACTGACCTTTTTGATTATCTGCCACTTACAGCTCTAATTGAGAGTCAGGT
TTTCTGCTTGCACGGAGGACTTTCCCCATCTTTGGATACATTAGATAATA
TACGTGCTCTGGACCGTATACAGGAGGTTCCTCATGAGGGCCCGATGTGT
GATCTCTTATGGTCTGATCCCGACGATCGATGTGGATGGGGAATATCTCC
TCGGGGTGCTGGGTACACATTTGGGCAGGATATAGCTTCACAGTTCAACC
ATACTAATGGGCTGACTCTT
back to top