FC877918

Overview
NameFC877918
Unique NameFC877918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length870
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_BOVIN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Bos taurus GN=PPP4C PE=2 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.303e-97
Identity = 161/233 (69.10%), Postives = 195/233 (83.69%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQIE L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +
Sbjct:    1 MAEISDLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDM 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4CB_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit B OS=Danio rerio GN=ppp4cb PE=2 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.702e-97
Identity = 160/233 (68.67%), Postives = 195/233 (83.69%), Query Frame = 1
Query:  172 MPSQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            M   +DLDRQI+ L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+  VW++ T++FDYL L+A+I+ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N + +
Sbjct:    1 MGDMSDLDRQIDQLRRCELIKENEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDM 233          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4CA_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit A OS=Danio rerio GN=ppp4ca PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.103e-96
Identity = 158/228 (69.30%), Postives = 193/228 (84.65%), Query Frame = 1
Query:  187 DLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            DLDRQIE L +C+ + E EVK LC +AR ILVEE NVQ V  PVTVCGDIHGQF+DL ELFR+GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGF+DEC RKYG+A VW++ T++FDYL L+A+++ ++FC+HGGLSPS+ TLD IR +DR QEVPH+GPMCDLLWSDP+D  GWG+SPRGAGY FG D+ +QFN  N +++
Sbjct:   10 DLDRQIEQLRRCELIKENEVKALCAKAREILVEESNVQSVDSPVTVCGDIHGQFYDLKELFRVGGEVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFFDECHRKYGSATVWRYCTEIFDYLSLSAIVDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDISM 237          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C_DICDI (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Dictyostelium discoideum GN=ppp4c PE=1 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 3.550e-95
Identity = 155/227 (68.28%), Postives = 193/227 (85.02%), Query Frame = 1
Query:  184 ADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGL 864
            +DLDRQIE L +C+ + E EV+ LC +AR IL+EE NVQ V  PVT+CGDIHGQF+DL ELF++GG+ P TNYLFMGD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFY+EC+RKYG+  VWK+ T++FDYL L+AL++ ++FC+HGGLSPS++TLD IRA+DR QEVPHEGPMCDL+WSDP+D  GW  SPRGAG+ FG+D+  +FNH N L
Sbjct:    3 SDLDRQIEQLKRCEIIKESEVRALCSKAREILLEEGNVQRVDSPVTICGDIHGQFYDLKELFKVGGDCPQTNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYEECVRKYGSVTVWKYCTEIFDYLSLSALVDGKIFCVHGGLSPSINTLDQIRAIDRKQEVPHEGPMCDLMWSDPEDIPGWNGSPRGAGFLFGEDVVQKFNHDNNL 229          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PPX4_PARTE (Serine/threonine-protein phosphatase PP-X homolog 4 OS=Paramecium tetraurelia GN=Ppx4 PE=3 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 1.033e-94
Identity = 158/231 (68.40%), Postives = 191/231 (82.68%), Query Frame = 1
Query:  178 SQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            SQ+DLDRQI  L  C+ + E EVK LC +AR ILVEE NVQ V  PVT+CGDIHGQF DL+ELF++GG+ PDTNYLF+GD+VDRG+ SVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+ NVW++ TD+FDYL L A+IE ++FC+HGGLSPS+ T+D+IRA+DR QEVPH+G MCDL+WSDPD+  GW +SPRGAGY FG D+   FN  N + L
Sbjct:    2 SQSDLDRQIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSLNVWRYCTDIFDYLSLAAVIEEKIFCVHGGLSPSIKTMDDIRAIDRKQEVPHDGAMCDLMWSDPDEIEGWNLSPRGAGYLFGGDVVDDFNRKNNIEL 232          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PPX3_PARTE (Serine/threonine-protein phosphatase PP-X homolog 3 OS=Paramecium tetraurelia GN=Ppx3 PE=3 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 1.033e-94
Identity = 158/231 (68.40%), Postives = 191/231 (82.68%), Query Frame = 1
Query:  178 SQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            SQ+DLDRQI  L  C+ + E EVK LC +AR ILVEE NVQ V  PVT+CGDIHGQF DL+ELF++GG+ PDTNYLF+GD+VDRG+ SVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+ NVW++ TD+FDYL L A+IE ++FC+HGGLSPS+ T+D+IRA+DR QEVPH+G MCDL+WSDPD+  GW +SPRGAGY FG D+   FN  N + L
Sbjct:    2 SQSDLDRQIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSLNVWRYCTDIFDYLSLAAVIEEKIFCVHGGLSPSIKTMDDIRAIDRKQEVPHDGAMCDLMWSDPDEIEGWNLSPRGAGYLFGGDVVDDFNRKNNIEL 232          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PPX1_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 1 OS=Arabidopsis thaliana GN=PPX1 PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 5.126e-94
Identity = 155/228 (67.98%), Postives = 194/228 (85.09%), Query Frame = 1
Query:  184 ADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGL 864
            +DLDRQI  L +C+PL E EVK LC +A  ILVEE NVQ V  PVT+CGDIHGQF+D++ELF++GG+ P TNYLFMGD+VDRGYYSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG++NVW++ TD+FDY+ L+A++E+++FC+HGGLSP++ TLD IR +DR QEVPH+G MCDLLWSDP+D   GWG+SPRGAG+ FG  + + FNH+N +
Sbjct:    2 SDLDRQIGQLKRCEPLSESEVKALCLKAMEILVEESNVQRVDAPVTLCGDIHGQFYDMMELFKVGGDCPKTNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSSNVWRYCTDIFDYMSLSAVVENKIFCVHGGLSPAIMTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNI 229          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis elegans GN=pph-4.1 PE=1 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 5.126e-94
Identity = 156/229 (68.12%), Postives = 191/229 (83.41%), Query Frame = 1
Query:  187 DLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            DLDR IE LM+C+ + EQ+VK LC +AR IL EE NVQ +  PVT+CGDIHGQF+DL+ELF++GG  P+TNYLF+GD+VDRG+YSVET  LL+ALK RY DR+ ++RGNHESRQITQVYGFYDECLRKYGNA+VWKH T++FDYL L A+I+ +VFC+HGGLSPS+ T+D IR +DR QEVPH+GPMCDLLWSDP++   GWG+SPRGAGY FG D +  F  TNG+ L
Sbjct:   31 DLDRHIEKLMRCELIAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLMELFKVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECLRKYGNASVWKHCTEVFDYLSLAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQEVPHDGPMCDLLWSDPEEGNVGWGLSPRGAGYLFGADASKTFCETNGVDL 259          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PPX2_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana GN=PPX2 PE=2 SV=2)

HSP 1 Score: 342.813 bits (878), Expect = 1.491e-93
Identity = 155/228 (67.98%), Postives = 193/228 (84.65%), Query Frame = 1
Query:  184 ADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGL 864
            +DLD+QIE L +C+ L E EVK LC +A  ILVEE NVQ V  PVT+CGDIHGQF+D+ ELF++GG+ P TNYLF+GD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+ NVW++ TD+FDYL L+AL+E+++FC+HGGLSP++ TLD IRA+DR QEVPH+G MCDLLWSDP+D   GWG+SPRGAG+ FG  + + FNH+N +
Sbjct:    2 SDLDKQIEQLKRCEALKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALVENKIFCVHGGLSPAIMTLDQIRAIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNI 229          
BLAST of FC877918 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEBR (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis briggsae GN=pph-4.1 PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 5.667e-93
Identity = 155/232 (66.81%), Postives = 190/232 (81.90%), Query Frame = 1
Query:  178 SQADLDRQIEHLMQCKPLPEQEVKILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTL 870
            S  DLDR IE LM+C+ + EQ+VK LC +AR IL EE NVQ +  PVT+CGDIHGQF+DL+ELFR+GG  P+TNYLF+GD+VDRG+YSVET  LL+ALK RY DR+ ++RGNHESRQITQVYGFYDEC+RKYGNA+VWKH T++FDYL L A+I+ +VFC+HGGLSPS+ T+D IR +DR QEVPH+GPMCDLLWSDP++   GWG+SPRGAGY FG D +  F   N + L
Sbjct:   28 STHDLDRHIEKLMRCELIAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLMELFRVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECMRKYGNASVWKHCTEVFDYLALAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQEVPHDGPMCDLLWSDPEEGNVGWGLSPRGAGYLFGADASKTFCEANSVDL 259          
The following BLAST results are available for this feature:
BLAST of FC877918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
PP4C_BOVIN1.303e-9769.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CB_DANRE1.702e-9768.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CA_DANRE1.103e-9669.30Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_DICDI3.550e-9568.28Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPX4_PARTE1.033e-9468.40Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX3_PARTE1.033e-9468.40Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX1_ARATH5.126e-9467.98Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PP4C1_CAEEL5.126e-9468.12Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPX2_ARATH1.491e-9367.98Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PP4C1_CAEBR5.667e-9366.81Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ5YO10RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ5YO10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877918 ID=FC877918; Name=FC877918; organism=Citrus clementina; type=EST; length=870bp
CTGAGTTCGAGGGCCAAGGCAAATCCACTACCTTGTATCTCTCTTCAAAC
CCTAACCCTAATCGCAAATCTACGATGACCTGAACCTTCATCCAGCCCTC
ATTGCCCGTGCTCACGCTTCACTGTCCGATCACAGAATCATATCTAAAGG
CGTCGAACGAAATCTCAAACGATGCCGTCGCAGGCCGATCTGGACCGTCA
GATCGAGCACTTGATGCAGTGCAAGCCGTTGCCGGAACAGGAGGTAAAGA
TTTTGTGCGAGCAAGCGAGAGCTATTCTTGTGGAGGAATGGAACGTGCAA
CCCGTCAAATGCCCGGTCACCGTCTGCGGCGACATTCACGGACAGTTTCA
CGATCTCGTCGAGCTTTTTCGCATAGGTGGCAACGCTCCTGATACCAATT
ATCTCTTCATGGGCGACTATGTTGATCGTGGATACTACTCAGTAGAGACC
GTCACTCTTTTAGTTGCTCTGAAAGTACGTTATAGAGATAGAATAACAAT
TCTGAGGGGAAATCATGAGAGTCGTCAGATAACTCAAGTGTATGGATTTT
ATGATGAATGTTTGAGAAAATATGGAAATGCTAATGTCTGGAAGCATTTC
ACTGACCTTTTTGATTATCTGCCACTTACAGCTCTAATTGAGAGTCAGGT
TTTCTGCTTGCACGGAGGACTTTCCCCATCTTTGGATACATTAGATAATA
TACGTGCTCTGGACCGTATACAGGAGGTTCCTCATGAGGGCCCGATGTGT
GATCTCTTATGGTCTGATCCCGACGATCGATGTGGATGGGGAATATCTCC
TCGGGGTGCTGGGTACACATTTGGGCAGGATATAGCTTCACAGTTCAACC
ATACTAATGGGCTGACTCTT
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