FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLPD (Prolyl-tRNA synthetase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=proS PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 8.936e-73 Identity = 72/113 (63.72%), Postives = 91/113 (80.53%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ + +WI SYRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEE+++E ++MI++Y FA + A+PVI G+K+ E FAGA T+ IEAMM D Sbjct: 106 VRPTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATPEESQEEVVRMINVYKTFAENYMALPVIIGKKTDSEKFAGAVDTWCIEAMMQD 218 HSP 2 Score: 138.272 bits (347), Expect = 8.936e-73 Identity = 65/100 (65.00%), Postives = 78/100 (78.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT RS D++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL Sbjct: 5 ITTRSADYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQTALDRMFKETGHVNAYFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_BORGA (Prolyl-tRNA synthetase OS=Borrelia garinii GN=proS PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.165e-72 Identity = 72/114 (63.16%), Postives = 93/114 (81.58%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 +RPTSETI+ +M+++WI SYRDLPL +NQWANV RWE RT+PF+RT EFLWQEGHTAHAT EEA +E + ++D+Y +F ++ AIPV G+KS+ E FAGA TY+IEA+M DK Sbjct: 106 LRPTSETIIWNMYSKWIKSYRDLPLKINQWANVVRWEKRTRPFLRTTEFLWQEGHTAHATEEEAVEETLLILDLYKRFMEDYLAIPVFCGKKSEKEKFAGAVSTYSIEALMQDK 219 HSP 2 Score: 135.191 bits (339), Expect = 1.165e-72 Identity = 58/101 (57.43%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 I + D++ WYLD++ A+LADY PV+G MVI PYGY+IW IQ L+ KFKETGH N YFP IPY F+EKE H+EGFSPE A++ GG+ L E LV Sbjct: 5 IASKEDDYSKWYLDIVQKAKLADYSPVKGCMVIMPYGYSIWSKIQSILDKKFKETGHENAYFPMLIPYGFLEKEKDHIEGFSPEFAIIKDAGGESLAEPLV 105
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_BORBZ (Prolyl-tRNA synthetase OS=Borrelia burgdorferi (strain ZS7) GN=proS PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.982e-72 Identity = 72/114 (63.16%), Postives = 93/114 (81.58%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 +RPTSETI+ +M+++WI SYRDLPL +NQWANV RWE RT+PF+RT EFLWQEGHTAHAT EEA +E + ++D+Y +F ++ AIPV G+KS+ E FAGA TY+IEA+M DK Sbjct: 106 LRPTSETIIWNMYSKWIKSYRDLPLKINQWANVVRWEKRTRPFLRTTEFLWQEGHTAHATEEEALEETLLILDVYKRFIEDYLAIPVFCGKKSEKEKFAGAVSTYSIEALMQDK 219 HSP 2 Score: 134.42 bits (337), Expect = 1.982e-72 Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 I + D++ WYLD++ A+LADY PV+G MVI PYGY+IW IQ L+ KFKETGH N YFP IPYSF+E+E H++GFSPE A++ GG+ L E LV Sbjct: 5 IASKEDDYSKWYLDIVQKAKLADYSPVKGCMVIMPYGYSIWSKIQSILDKKFKETGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLV 105
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_BORBU (Prolyl-tRNA synthetase OS=Borrelia burgdorferi GN=proS PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.982e-72 Identity = 72/114 (63.16%), Postives = 93/114 (81.58%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 +RPTSETI+ +M+++WI SYRDLPL +NQWANV RWE RT+PF+RT EFLWQEGHTAHAT EEA +E + ++D+Y +F ++ AIPV G+KS+ E FAGA TY+IEA+M DK Sbjct: 106 LRPTSETIIWNMYSKWIKSYRDLPLKINQWANVVRWEKRTRPFLRTTEFLWQEGHTAHATEEEALEETLLILDVYKRFIEDYLAIPVFCGKKSEKEKFAGAVSTYSIEALMQDK 219 HSP 2 Score: 134.42 bits (337), Expect = 1.982e-72 Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 I + D++ WYLD++ A+LADY PV+G MVI PYGY+IW IQ L+ KFKETGH N YFP IPYSF+E+E H++GFSPE A++ GG+ L E LV Sbjct: 5 IASKEDDYSKWYLDIVQKAKLADYSPVKGCMVIMPYGYSIWSKIQSILDKKFKETGHENAYFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLV 105
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_NATTJ (Prolyl-tRNA synthetase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=proS PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.585e-72 Identity = 71/113 (62.83%), Postives = 87/113 (76.99%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE + M++ WI S+RDLP+L+NQWANV RWE TKPF+RT EFLWQEGHTAH T E+AE+EA+QM+D+Y F AIPV+ G KS+ E FAGA RT+ IEA+M D Sbjct: 113 VRPTSEAMFGEMYSDWIQSWRDLPVLINQWANVVRWEKSTKPFLRTSEFLWQEGHTAHRTEEDAEEEALQMLDVYKDFVENDMAIPVLNGLKSEKEKFAGALRTFCIEALMSD 225 HSP 2 Score: 138.272 bits (347), Expect = 2.585e-72 Identity = 64/109 (58.72%), Postives = 82/109 (75.23%), Query Frame = 2 Query: 239 RGNRERV--ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 + N E V ITP+S+D++ WYLDVI +L DY PV+G MVIRPYGYAIWE +++ L+ + KETGH N YFP FIP S ++KEA HVEGF+PE+A +T GG +EL E L Sbjct: 3 KNNEEFVKEITPQSEDYSQWYLDVIKKTKLVDYAPVKGCMVIRPYGYAIWEKMKEGLDRRIKETGHENAYFPLFIPESLLQKEADHVEGFAPEVAWITKGGDEELSESL 111
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MYXXD (Prolyl-tRNA synthetase OS=Myxococcus xanthus (strain DK 1622) GN=proS PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.371e-72 Identity = 76/114 (66.67%), Postives = 93/114 (81.58%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 +RPTSETI+N F +WI SYRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHT H T E+AEKE QM+++Y FA ++ A+PV+ G+KS+ E FAGA RTY+IEAMM DK Sbjct: 112 IRPTSETIINRSFAKWIQSYRDLPLLLNQWANVMRWEMRTRLFLRTTEFLWQEGHTCHETEEDAEKETRQMLEVYRTFAEDYMAMPVMTGQKSESERFAGALRTYSIEAMMQDK 225 HSP 2 Score: 126.331 bits (316), Expect = 3.371e-72 Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 +TPR + F+ WY+D++ A+LADY V+G MVIRP GYA+WE +Q L+ FK+ GH N YFP IP S+++KEA HVEGF+P+LA+VT GG +LEE V Sbjct: 11 LTPREKGFSEWYVDLVQKAKLADYSDVKGCMVIRPNGYALWENMQRVLDKMFKDLGHKNAYFPLLIPESYLKKEAEHVEGFNPQLAVVTHAGGSKLEEPYV 111
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PROA2 (Prolyl-tRNA synthetase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=proS PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.734e-72 Identity = 75/114 (65.79%), Postives = 92/114 (80.70%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 VRPTSETI+ + +WI SYRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EA++E M+MI++Y FA E+ A+PVI GRK++ E FAGA T+ IEAMM DK Sbjct: 106 VRPTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATSTEAQEEVMRMINVYKTFAEEYMALPVIMGRKTESEKFAGAVETWCIEAMMQDK 219 HSP 2 Score: 131.724 bits (330), Expect = 5.734e-72 Identity = 60/100 (60.00%), Postives = 76/100 (76.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT R D++ WY+D++ +A+LADY VRG M+IRP GYAIWE +Q L+ FK TGH N YFP FIP SFI+KEA H+EGF+PE A+VT GGG++L E L Sbjct: 5 ITLRETDYSQWYIDLVRSAKLADYSDVRGCMIIRPNGYAIWEKMQAALDAMFKATGHVNAYFPLFIPESFIKKEAEHIEGFAPECAVVTHGGGEQLAENL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PELPB (Prolyl-tRNA synthetase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=proS PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.734e-72 Identity = 71/113 (62.83%), Postives = 91/113 (80.53%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ + +WI SYRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHA PEE+++E ++MI++Y FA E+ A+PVI G+K+ E FAGA T+ IEAMM D Sbjct: 106 IRPTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHANPEESQEEVLRMINVYKTFAEEYMAMPVIMGKKTDNEKFAGAVDTWCIEAMMQD 218 HSP 2 Score: 136.346 bits (342), Expect = 5.734e-72 Identity = 64/100 (64.00%), Postives = 78/100 (78.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT RS+D++ WY+D++ +A+LADY VRG M IRP GYAIWE +Q L+ FKETGH N YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL Sbjct: 5 ITSRSEDYSQWYIDLVRSAKLADYADVRGCMDIRPNGYAIWEKMQAALDRMFKETGHVNAYFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_BORAP (Prolyl-tRNA synthetase OS=Borrelia afzelii (strain PKo) GN=proS PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 7.478e-72 Identity = 71/114 (62.28%), Postives = 93/114 (81.58%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 +RPTSETI+ +M+++WI SYRDLPL +NQWANV RWE RT+PF+RT EFLWQEGHTAHAT EEA +E + ++D+Y +F ++ AIPV G+KS+ E FAGA TY++EA+M DK Sbjct: 106 LRPTSETIIWNMYSKWIKSYRDLPLKINQWANVIRWEKRTRPFLRTTEFLWQEGHTAHATEEEALEETLLILDVYKRFMEDYLAIPVFCGKKSENEKFAGAVSTYSVEALMQDK 219 HSP 2 Score: 133.65 bits (335), Expect = 7.478e-72 Identity = 57/101 (56.44%), Postives = 72/101 (71.29%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 I + D++ WYLD++ A+LADY PV+G MVI PYGY+IW IQ L+ KFKETGH N YFP IPY F+EKE H++GFSPE A++ GG+ L E LV Sbjct: 5 IASKEDDYSKWYLDIVQKAKLADYSPVKGCMVIMPYGYSIWSKIQSILDKKFKETGHENAYFPMLIPYGFLEKEKDHIDGFSPEFAIIKDAGGESLVEPLV 105
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_SYMTH (Prolyl-tRNA synthetase OS=Symbiobacterium thermophilum GN=proS PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.272e-71 Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ HM+ QWI SYRDLP+L+NQWANV RWE RT PF+RT EFLWQEGHTAHAT EEA +E M+M+++Y F AIP+ G+K+ E FAGA TY+IEAMM D Sbjct: 112 LRPTSETIIGHMYAQWIQSYRDLPVLINQWANVFRWEKRTLPFLRTSEFLWQEGHTAHATEEEAREETMRMLEVYRDFVETEMAIPLYVGQKTPSEKFAGAVDTYSIEAMMKD 224 HSP 2 Score: 131.724 bits (330), Expect = 1.272e-71 Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITP+S+DF+ WY+DVI A+L DY PVRG +V +P GY +WE IQ L+ +FKETGH N YFP IP SF +KE HVEGF+PEL VT GG++LEE+L Sbjct: 11 ITPQSEDFSRWYIDVIRKADLMDYTPVRGCIVFKPDGYELWERIQAGLDKRFKETGHRNAYFPMLIPESFFQKEKEHVEGFNPELPWVTEAGGEKLEERL 110 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |