FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METVS (Prolyl-tRNA synthetase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=proS PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.899e-28 Identity = 42/115 (36.52%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFL-WQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + +M QWI + DLP+ + Q N R+E + T+P +R E + ++E HTAH+T ++ K+ + I+IY KF ++ IPVI ++ + + F GA T + + D Sbjct: 98 LRPTSETTMYYMMKQWIKVHTDLPMKLYQVVNTFRYETKHTRPLIRLREIMSFKEAHTAHSTQDDCNKQIKEAIEIYGKF-FDEICIPVIISKRPEWDKFPGADYTMAFDTIFPD 211 HSP 2 Score: 65.0846 bits (157), Expect = 3.899e-28 Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 2 Query: 278 DFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 +F+ WY +++ A + D P++G V PYG+ I + L +T H FP IP + + KE H++GF E+ VT GG LE KL Sbjct: 2 EFSEWYSEILEKAGIYDLRYPIKGCGVYLPYGFKIRRYSFEILRKLLDDTNHDETLFPMLIPENLLAKEGEHIKGFEDEVYWVTHGGKSPLEIKL 96
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MYCPN (Prolyl-tRNA synthetase OS=Mycoplasma pneumoniae GN=proS PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.072e-28 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE +++ + SY++LP++ NQW V R E T+PF+R EF WQE H + +E A+ +Y IP G KS E FAGA T+T+E++M D Sbjct: 121 LRPTSEIAFCNLWKKQSFSYQNLPVIYNQWTCVFRAEKNTRPFLRNSEFYWQETHGLFSDGVNSESAAIAFWKLYQDIIVNQLCIPAFVGLKSPNERFAGAQNTWTVESIMPD 233 HSP 2 Score: 60.8474 bits (146), Expect = 5.072e-28 Identity = 40/121 (33.06%), Postives = 56/121 (46.28%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLN-----VKFKETGHSNMYFPQFIP------------------YSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 + Q+ WY ++S A+L YG V+GT P + +W IQ N +K K+ + QFIP YS +KE HVEGF+PEL L+ G K+L + LV Sbjct: 4 KDQNLTLWYDQLLSKAQLVSYGDVKGTNCFLPNSWNLWLQIQRLYNNATALIKLKD----KVILKQFIPIEPLPYTVEQVQLPTLSFYSEYQKEKRHVEGFNPELFLIEQIGTKKLHDPLV 120
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PYRKO (Prolyl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=proS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.604e-28 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + MF+ WI S+ DLP + Q NV R+E + T+P +R E + E HTAH + E+AE++ + ++I+ A A+P I ++ + + F GA + E MM D Sbjct: 107 LRPTSETAMYSMFSLWIRSHADLPFKIYQIVNVYRYETKHTRPLIRVREISRFFEAHTAHDSYEDAERQIKEDLEIFDNLA-RFLALPYIISKRPEWDKFPGAYYSLGAEVMMPD 220 HSP 2 Score: 71.2478 bits (173), Expect = 6.604e-28 Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 272 SQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 S++F+ WY ++I A + D PV+G V PYG I I+ +++ + + TGH + FP IP + +KEA H++GF E+ VT G + L+ +L+ Sbjct: 9 SENFSEWYNELIETAGIQDKRYPVKGMNVWLPYGLKIMRNIERFIHAEMERTGHDEVLFPALIPETEFQKEAEHIKGFEGEVYWVTHAGLEPLDVRLI 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_SULIK (Prolyl-tRNA synthetase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=proS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.597e-28 Identity = 39/115 (33.91%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE + M W+ SY+ LP Q +V R+E + T+P +R E ++E HT H T ++A+++ + I+IY K + + IP + + + + FAGA TY + +M D Sbjct: 108 LRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKI-FNNLTIPYVLSERPEWDRFAGALHTYAFDTIMPD 221 HSP 2 Score: 71.2478 bits (173), Expect = 8.597e-28 Identity = 35/98 (35.71%), Postives = 56/98 (57.14%), Query Frame = 2 Query: 272 SQDFNAWYLDVISNAELADYG--PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 S++F+ W+ V+ E DYG PV+G V PYG+ + + I + TGH + FP IP + +E++H++GF E+ VT GG ++L+ KL Sbjct: 9 SKNFSEWFDWVLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWVTKGGSEDLDVKL 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_SULTO (Prolyl-tRNA synthetase OS=Sulfolobus tokodaii GN=proS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.119e-27 Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 2 Query: 275 QDFNAWYLDVISNAELADYG--PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ++F+ W V+ AE+ DYG PV+G V PYG+ I + + + ETGH + FP IP ++KE+ H+ GF E+ VT GG ++L+ KL Sbjct: 10 KNFSEWLDWVLREAEIYDYGRYPVKGMGVWMPYGFKIRQNVLQLIRKLLDETGHEEVLFPLLIPEDLLKKESEHIRGFEEEVYWVTKGGSQDLDVKL 106 HSP 2 Score: 70.8626 bits (172), Expect = 1.119e-27 Identity = 39/115 (33.91%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M + W+ SY+ LP Q +V R+E + T+P +R E ++E HT H T E+A ++ + I+IY F ++ IP + ++ + + FAGA T + ++ D Sbjct: 108 LRPTSETSITFMESFWVKSYKQLPKKYYQIVSVFRYETKATRPMMRLREITTFKEAHTLHETYEDAARQVDEAINIYKAF-FDELGIPYMISKRPEWDKFAGAEYTIAFDTILPD 221
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METBF (Prolyl-tRNA synthetase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=proS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.457e-27 Identity = 42/115 (36.52%), Postives = 67/115 (58.26%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFL-WQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M+ W+ S+ D P+ + Q N R+E + T+P +R E ++E HT HAT E+AE + + I +YT+ Y +PV+ R+ + F GA T ++A+M D Sbjct: 111 LRPTSETAIYPMYKMWVRSHADFPIKIYQIVNTFRYETKHTRPLIRLREITSFKEAHTVHATWEDAEAQVKEAIGLYTEI-YRRLGVPVLRSRRPDWDKFPGADYTDALDAIMPD 224 HSP 2 Score: 62.7734 bits (151), Expect = 1.457e-27 Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 2 Query: 266 PRSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELE 550 P ++F+ WY +++ AE+ D PV+G V P+G+AI + + +GH FP IP + KEA H++GF E+ VT GG L+ Sbjct: 11 PPKEEFSEWYNELLWMAEIMDVRYPVKGLYVWYPFGFAIRRNTYNIIREILDNSGHQEALFPLLIPENEFMKEAEHIKGFEDEVYWVTHGGRDTLD 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METMP (Prolyl-tRNA synthetase OS=Methanococcus maripaludis GN=proS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.458e-27 Identity = 38/115 (33.04%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFL-WQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + +M QWI + DLPL + Q N R+E + T+P +R E + ++E HTAHAT +E + + + + +Y F ++ +P + ++ + + F GA T + + D Sbjct: 98 LRPTSETTMYYMMKQWIKVHTDLPLKLYQVVNTFRYETKHTRPLIRLREIMSFKEAHTAHATKKECDAQIEEALTLYKAF-FDEIGVPYVISKRPEWDKFPGADYTMAFDTIYPD 211 HSP 2 Score: 70.0922 bits (170), Expect = 1.458e-27 Identity = 36/95 (37.89%), Postives = 50/95 (52.63%), Query Frame = 2 Query: 278 DFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 +F+ WY D++ A + D P++G V PYG+ I + L ETGH FP IP + + KE H++GF E+ VT GG LE KL Sbjct: 2 EFSEWYSDILEKAGIYDLRYPIKGCGVYLPYGFKIRRYSFEILRKLLDETGHDETLFPMLIPENLLAKEGEHIKGFEDEVFWVTHGGKTPLEVKL 96
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_SULSO (Prolyl-tRNA synthetase OS=Sulfolobus solfataricus GN=proS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.896e-27 Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE + M W+ SY+ LP Q +V R+E + T+P +R E ++E HT H T ++A+K+ + I+IY K ++ IP + + + + FAGA TY + +M D Sbjct: 108 LRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQKQVEEAIEIYKKI-FDTLTIPYVLSERPEWDRFAGALHTYAFDTIMPD 221 HSP 2 Score: 69.3218 bits (168), Expect = 1.896e-27 Identity = 34/98 (34.69%), Postives = 55/98 (56.12%), Query Frame = 2 Query: 272 SQDFNAWYLDVISNAELADYG--PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 S++F+ W+ V+ E DYG P++G V PYG+ + + I + TGH + FP IP + +E++H++GF E+ VT GG +L+ KL Sbjct: 9 SKNFSEWFDWVLREGEFYDYGRYPIKGMGVWMPYGFKLRQNIIGIIRNFLDSTGHEEVLFPLLIPEDLLRRESTHIKGFEEEVFWVTKGGSTDLDVKL 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_METMJ (Prolyl-tRNA synthetase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=proS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-27 Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFL-WQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M+ WI S+ DLPL + Q N R+E + T+P +R E ++E HT HAT EEA + I +Y +F Y+ +PVI R+ + F GA T + +M D Sbjct: 108 LRPTSETAIYPMYALWIRSHTDLPLRLYQVVNTFRYETKHTRPLIRLREITSFKEAHTVHATREEAAAQVETAIALYREF-YDTLRVPVILSRRPAWDKFPGADYTIAADTIMPD 221 HSP 2 Score: 64.6994 bits (156), Expect = 1.897e-27 Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 2 Query: 266 PRSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 PR ++F+ WY D++ AE+ D PV+G V P+G+ I + L + H+ FP IP + KEA H++GF E+ VT GG EL+ L Sbjct: 9 PRKENFSEWYNDILWRAEIMDVRYPVKGLYVWYPHGFGIRKRAYGVLR-DLMDRDHAETMFPLLIPKTEFMKEAEHIKGFEDEVYWVTHGGRNELDVPL 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PYRAE (Prolyl-tRNA synthetase OS=Pyrobaculum aerophilum GN=proS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.468e-27 Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEF-LWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSET + M WI Y+DLPL V Q +V R E + T P +R E +++E HT HA E+AE++ + ++IY K ++ + + ++ + + FAGA T + ++ D Sbjct: 112 LRPTSETAIMPMVKLWIQDYKDLPLRVYQIVSVFRAETKMTHPMIRLREISMFKEAHTVHADKEDAERQVREAVEIY-KRIFDEMCLAYLINKRPEWDKFAGAEYTIAFDTILPD 225 HSP 2 Score: 69.707 bits (169), Expect = 2.468e-27 Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 2 Query: 290 WYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 W+ ++ AEL D PV+G V RPYG I +++ + ETGH + FP FIPY F KE+ H++GF E+ V+ GG E E+LV Sbjct: 22 WFHWLLREAELYDVRYPVKGAYVWRPYGMKIRRNVENLIRKFHDETGHEEVLFPVFIPYEFFGKESQHIKGFEKEVFWVSKGG--EAGERLV 111 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |