FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_THEAC (Prolyl-tRNA synthetase OS=Thermoplasma acidophilum GN=proS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.725e-24 Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMM 905 +RPTSE+ + MF+ WI S+ DLPL + Q +V R+E + T+ F+R E + E HTAHAT E+AE + Q +I+ + + +P ++ + F GA T + ++ Sbjct: 103 LRPTSESAMYPMFSLWIRSHADLPLKIYQIVSVYRYETKHTRSFIRIREIHFFEAHTAHATYEDAEAQMDQYKEIWREIS-SLLCLPYFYDQRPDWDKFPGAMYTIAFDTVL 213 HSP 2 Score: 63.929 bits (154), Expect = 8.725e-24 Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 + ++F+ WY ++I+ AEL+D PV+G V PYG+ I I + + + FP I S +E E H+ GF E+ VT GG ++LEE+L Sbjct: 4 KKENFSEWYNEIITLAELSDKRYPVKGMNVWLPYGWKIMSLIDSIVRRAVDKRNFQEVNFPILIGRSMLEVEFEHIRGFENEIYWVTKGGKEKLEEEL 101
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PICTO (Prolyl-tRNA synthetase OS=Picrophilus torridus GN=proS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.657e-22 Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMR-TKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMM 905 +RPTSE+ + MF WI S++DLPL + Q +V R+E + T+ F+R E + E HTAH +AE++ + +DI++ A E +P + + F GA T + +M Sbjct: 103 LRPTSESAMYTMFPLWIRSHQDLPLKIYQIVSVYRYETKHTRSFIRVREIHFFEAHTAHVDYGDAERQMSEYMDIWSSIA-EKLCLPYNIDMRPDWDKFPGAKYTLAFDTLM 213 HSP 2 Score: 55.0694 bits (131), Expect = 7.657e-22 Identity = 30/98 (30.61%), Postives = 51/98 (52.04%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYG-PVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 + ++F+ WY ++I A+L+D ++G V PYG I I + + + FP I S +E E H++GF E+ VT GG ++L+ +L Sbjct: 4 KKENFSEWYNEIIDLAKLSDKRYAIKGMNVWLPYGLKIMRLIDNIIRDNVDNKSFQEVSFPVLITRSQLETEFEHIKGFENEIYWVTKGGSEKLDIEL 101 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |