FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_RUBXD (Prolyl-tRNA synthetase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=proS PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.679e-71 Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE+I+ + +WIHSYRDLP+L+NQW NV RWEM T+PF+RT EFLWQEGHT HAT EEA +EA++M+++Y YE AIPV+ G KS E FAGA T+T E +MGD Sbjct: 109 IRPTSESIICDFYRKWIHSYRDLPVLINQWCNVLRWEMVTRPFLRTAEFLWQEGHTVHATAEEAREEALRMLNVYRDCFYEVLAIPVLTGMKSPSERFAGAVETFTCEGLMGD 221 HSP 2 Score: 135.191 bits (339), Expect = 3.679e-71 Identity = 61/100 (61.00%), Postives = 77/100 (77.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 +T +S+D + WYL+++ A+LADYGPVRGT IRPYG+AIWE IQ L+ +FK TGH N YFP IP S++ KEA HVEGF+PE A VT+GG ELEE+L Sbjct: 8 LTKKSEDSSRWYLELVRMAKLADYGPVRGTFAIRPYGFAIWERIQADLDARFKATGHVNAYFPLLIPESYLTKEAEHVEGFAPECAWVTVGGDDELEERL 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP2_CLOD6 (Prolyl-tRNA synthetase 2 OS=Clostridium difficile (strain 630) GN=proS2 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.358e-69 Identity = 67/113 (59.29%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ M+ +W+ SYR+LP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEA++E +Q +++Y E A+PV+AG+KS+ E FAG RTYTIEAMM D Sbjct: 113 VRPTSETIICTMYAKWLKSYRELPYLYNQWCSVVRWEKSTRPFLRTSEFLWQEGHTLHETAEEAQEETIQQLEVYKALCEELLAMPVVAGQKSESEKFAGGERTYTIEAMMHD 225 HSP 2 Score: 135.191 bits (339), Expect = 3.358e-69 Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT DF WY DVI+ +L DY PV+G MV++PYGYA+WE +Q++++ KFKETGH N YFP IP S + KEA HVEGF+PE+A VT GG K+LEE+L Sbjct: 12 ITKMEDDFPQWYTDVITKTDLVDYAPVKGFMVVKPYGYALWEKMQEFMDKKFKETGHKNCYFPLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEERL 111
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_ALKOO (Prolyl-tRNA synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=proS PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 5.711e-69 Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ M+++W+ SYRDLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEA+ E +QM++IY + A A+PV+ G+KS+ E FAGA TYT+EA+M D Sbjct: 113 VRPTSETIICEMYSKWLTSYRDLPFLYNQWCSVVRWEKSTRPFLRTSEFLWQEGHTLHETYEEAQAETLQMLNIYRETAENLLAMPVVIGQKSEKEKFAGAYATYTMEALMHD 225 HSP 2 Score: 137.117 bits (344), Expect = 5.711e-69 Identity = 62/100 (62.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITP DF WY DVI +L DY PV+G MVI+PYGYAIWE IQ+Y++ +FKETGH N YFP IP S ++KEA HVEGF+PE+A VT GG +EL E+L Sbjct: 12 ITPMEVDFAQWYTDVIKKTDLVDYSPVKGFMVIKPYGYAIWENIQNYMDKRFKETGHKNCYFPLLIPESLLKKEAEHVEGFAPEVAWVTHGGNEELAERL 111
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP2_STRAW (Prolyl-tRNA synthetase 2 OS=Streptomyces avermitilis GN=proS2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.652e-68 Identity = 66/102 (64.71%), Postives = 79/102 (77.45%), Query Frame = 2 Query: 257 VITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 V+TPR+ DF WY D+I+ AELAD GPVRGTMVIRPYGY +WE +Q ++ + KETG N YFP IP S++ KEA HVEGF+PELA+VT GGGKELEE V Sbjct: 6 VLTPRADDFPRWYQDLINKAELADNGPVRGTMVIRPYGYGLWERMQQEMDARIKETGTQNAYFPLLIPQSYLTKEADHVEGFAPELAVVTHGGGKELEEPAV 107 HSP 2 Score: 138.272 bits (347), Expect = 1.652e-68 Identity = 67/114 (58.77%), Postives = 81/114 (71.05%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQM-IDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE I+N F++W+ SYRDLPLL+NQWANV RWE+R + F+RT EFLWQEGHTAHAT EEA A + +Y F A+ V+ GRK+ E FAGA T T+E MMGD Sbjct: 108 VRPTSEMIINDYFSKWVQSYRDLPLLINQWANVVRWELRPRLFLRTTEFLWQEGHTAHATYEEARDFAAHIHRHVYADFMENVLAMDVVLGRKTAKERFAGAVNTLTLEGMMGD 221
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_SOLUE (Prolyl-tRNA synthetase OS=Solibacter usitatus (strain Ellin6076) GN=proS PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 6.229e-68 Identity = 69/111 (62.16%), Postives = 90/111 (81.08%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMM 905 +RPTSETI+ H F++WIHSYRDLPLL NQWANV RWE+RT+ F+RT EFLWQEGHTAH+ EEA +E ++++D+Y + A + A+PVI G K+ E FAGA ++Y+IEAMM Sbjct: 108 IRPTSETIIGHFFSKWIHSYRDLPLLYNQWANVIRWELRTRMFLRTTEFLWQEGHTAHSNHEEAVEEVLRILDLYAQVAEDIMAMPVIKGVKTHAEKFAGALKSYSIEAMM 218 HSP 2 Score: 124.405 bits (311), Expect = 6.229e-68 Identity = 60/105 (57.14%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 251 ERVITPRSQDFNAWYLDVISNAELADYGP-VRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 E IT RSQDF AWY DV+ ++A+ V+G MVI+ GYA+WE +Q L+ +FK T H N+YFP IP SF++KEA HVEGF+PELA+VT+ GGKELEE V Sbjct: 3 ESPITARSQDFAAWYQDVVLQGDMAEPAEIVKGCMVIKANGYAVWEVLQRELDDRFKATNHQNVYFPLLIPQSFLKKEAEHVEGFAPELAVVTVAGGKELEEPYV 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_ROSS1 (Prolyl-tRNA synthetase OS=Roseiflexus sp. (strain RS-1) GN=proS PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.381e-67 Identity = 70/114 (61.40%), Postives = 90/114 (78.95%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ + +++W+ SYRDLPLL+NQWANV RWEMRT+PF+RT EFLWQEGHT HAT E+AE+E + ++ ++Y F + AIPVI G KS+ E F GA R+Y IEAMM D Sbjct: 108 IRPTSETIIGYFYSKWVRSYRDLPLLINQWANVMRWEMRTRPFLRTTEFLWQEGHTVHATEEDAERETLLILHEVYADFVEKEMAIPVIKGLKSEKEKFPGALRSYCIEAMMQD 221 HSP 2 Score: 123.25 bits (308), Expect = 1.381e-67 Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 ITPR+QD++ WYLD++ A+LADY V +G +V +P GYAIWEAIQ L+ + K TGH N YFP IP SF+ KEA HVEGF+PE+A VT GG++L E V Sbjct: 6 ITPRAQDYSQWYLDIVQQADLADYAEVVKGCIVFKPTGYAIWEAIQRGLDDRIKATGHVNAYFPLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDLAEPYV 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CLOST (Prolyl-tRNA synthetase OS=Clostridium sticklandii GN=proS PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.349e-67 Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ M+++W+ SYR+LP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEA+ E +QM+ IY + A + AIPV+ GRKS E FAGA+ TYTIEA+M D Sbjct: 113 VRPTSETIICSMYSKWLTSYRELPYLYNQWCSVVRWEKSTRPFLRTSEFLWQEGHTLHETAEEAQAETLQMLAIYKEMAEDLLAIPVVDGRKSDRERFAGAAATYTIEALMHD 225 HSP 2 Score: 129.413 bits (324), Expect = 2.349e-67 Identity = 59/100 (59.00%), Postives = 73/100 (73.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT +DF WY DVI+ +L DY PV+G MVI+PYGYAIWE IQ +L+ +FKETGH N YFP IP S + KE HVEGF+PE+A VT GG ++L E+L Sbjct: 12 ITNMDEDFPQWYTDVITKTDLVDYSPVKGFMVIKPYGYAIWENIQAFLDRRFKETGHQNCYFPLLIPESLLNKEKEHVEGFAPEVAWVTHGGSEKLAERL 111
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP2_RHOSR (Prolyl-tRNA synthetase 2 OS=Rhodococcus sp. (strain RHA1) GN=proS2 PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.349e-67 Identity = 69/113 (61.06%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ M +WI S+RDLPLL+NQWANV RWE+R + F+RT EFLWQEGHTAH A +E M +DIY + A E AIPV+ G K+ E FAGA TYTIE MM D Sbjct: 109 VRPTSETIIGEMMAKWISSHRDLPLLLNQWANVVRWELRPRMFLRTTEFLWQEGHTAHVDEASARRETMLALDIYHEVARELAAIPVVPGEKTPGERFAGAVATYTIEGMMRD 221 HSP 2 Score: 132.494 bits (332), Expect = 2.349e-67 Identity = 62/104 (59.62%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 251 ERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 ER +T +S+DF AWY +V+ A L D GP +GTMVIRPYGY +WE +Q L+ + K+TGH N YFP IP S++ +EA HVEGFSPELA+VT GGK LEE LV Sbjct: 5 ERGVTAQSEDFAAWYNEVVFKAGLVDRGPAKGTMVIRPYGYRLWELLQSELDRRIKDTGHENAYFPLLIPESYLGREAEHVEGFSPELAVVTHVGGKVLEEPLV 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_ROSCS (Prolyl-tRNA synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=proS PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.063e-67 Identity = 70/114 (61.40%), Postives = 90/114 (78.95%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ + +++W+ SYRDLPLL+NQWANV RWEMRT+PF+RT EFLWQEGHT HAT E+AE+E + ++ ++Y F + AIPVI G KS+ E F GA R+Y IEAMM D Sbjct: 108 IRPTSETIIGYFYSKWVRSYRDLPLLINQWANVMRWEMRTRPFLRTTEFLWQEGHTVHATEEDAERETLLILHEVYADFVEKDMAIPVIRGLKSEKEKFPGALRSYCIEAMMQD 221 HSP 2 Score: 122.479 bits (306), Expect = 3.063e-67 Identity = 58/102 (56.86%), Postives = 75/102 (73.53%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 ITPR+QD++ WYLD++ A+LADY V +G +V +P GYA+WEAIQ L+ + K TGH N YFP IP SF+ KEA HVEGF+PE+A VT GG++L E V Sbjct: 6 ITPRAQDYSQWYLDIVQQADLADYAEVVKGCIVFKPTGYALWEAIQRGLDDRIKATGHVNAYFPLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDLAEPYV 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_BDEBA (Prolyl-tRNA synthetase OS=Bdellovibrio bacteriovorus GN=proS PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 8.855e-67 Identity = 71/114 (62.28%), Postives = 92/114 (80.70%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 +RPTSETI+ H F +W+ SYRDLP+LVNQW NV RWEMRT+ F+RT EFLWQEGHT HAT +EA++E +QM+++Y++FA ++ A+PVI G K+ E F GA TYTIEA+M DK Sbjct: 119 IRPTSETIIGHQFAKWVKSYRDLPILVNQWCNVMRWEMRTRMFLRTAEFLWQEGHTVHATAKEAQEETLQMLNVYSEFAEQYMAMPVIKGMKTPDERFPGAVDTYTIEALMQDK 232 HSP 2 Score: 114.005 bits (284), Expect = 8.855e-67 Identity = 61/116 (52.59%), Postives = 78/116 (67.24%), Query Frame = 2 Query: 251 ERVITP-RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT------IGGGK-----ELEEKLV 562 + ITP RSQ++ WY VI A++A+ PVRG MVI+P+GYA+WE +Q L+ FK+TGH N YFP IP SF+EKEA+HVEGF+ E A+VT G GK ELEE L+ Sbjct: 3 DTAITPTRSQNYPEWYQQVIVAADMAENSPVRGCMVIKPWGYAVWENMQGVLDRMFKDTGHVNAYFPLLIPLSFLEKEAAHVEGFAKECAVVTHHRLKGDGNGKLIPDGELEEPLI 118 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |