FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_BACFR (Prolyl-tRNA synthetase OS=Bacteroides fragilis GN=proS PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.640e-65 Identity = 74/113 (65.49%), Postives = 92/113 (81.42%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ + + WI SYRDLP+L NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEAE+EA++M+++Y +FA ++ A+PV+ G KS E FAGA TYTIEAMM D Sbjct: 123 IRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRLFLRTAEFLWQEGHTAHATREEAEEEAIRMLNVYAEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQD 235 HSP 2 Score: 110.923 bits (276), Expect = 3.640e-65 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 +T RS++++ WY D++ A+LA+ VRG MVI+PYGYAIWE +Q L+ FKETGH N YFP IP SF+ +EA HVEGF+ E A+VT Sbjct: 8 LTKRSENYSQWYNDLVVKADLAEQSAVRGCMVIKPYGYAIWEKMQRQLDDMFKETGHVNAYFPLLIPKSFLSREAEHVEGFAKECAVVT 96
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_BACFN (Prolyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=proS PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.640e-65 Identity = 74/113 (65.49%), Postives = 92/113 (81.42%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ + + WI SYRDLP+L NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEAE+EA++M+++Y +FA ++ A+PV+ G KS E FAGA TYTIEAMM D Sbjct: 123 IRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRLFLRTAEFLWQEGHTAHATREEAEEEAIRMLNVYAEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQD 235 HSP 2 Score: 110.923 bits (276), Expect = 3.640e-65 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 +T RS++++ WY D++ A+LA+ VRG MVI+PYGYAIWE +Q L+ FKETGH N YFP IP SF+ +EA HVEGF+ E A+VT Sbjct: 8 LTKRSENYSQWYNDLVVKADLAEQSAVRGCMVIKPYGYAIWEKMQRQLDDMFKETGHVNAYFPLLIPKSFLSREAEHVEGFAKECAVVT 96
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PARUW (Prolyl-tRNA synthetase OS=Protochlamydia amoebophila (strain UWE25) GN=proS PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 4.746e-65 Identity = 72/114 (63.16%), Postives = 87/114 (76.32%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 VRPTSETI+ F++W+ SYRDLPLL+NQWANV RWEMR + F+RT EFLWQEGHTAHAT EEA +E M M+++Y F + AIPVI G KS E F GA T+T+EAMM D+ Sbjct: 122 VRPTSETIIGDSFSRWVESYRDLPLLINQWANVVRWEMRPRIFLRTTEFLWQEGHTAHATHEEALQETMTMLEVYRSFVEDVLAIPVIVGEKSPGERFPGAENTFTLEAMMQDR 235 HSP 2 Score: 113.62 bits (283), Expect = 4.746e-65 Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 2 Query: 260 ITP-RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEK 556 ITP R D+ WY V+ ++LA+ PVRG+MVI+P+GY IWE IQ L+ + KETGH N YFP FIP SF+EKEA+H+EGF+ E A+VT LEEK Sbjct: 10 ITPTRENDYPEWYQQVVKASDLAENSPVRGSMVIKPWGYGIWENIQRQLDDRIKETGHENAYFPLFIPLSFLEKEAAHIEGFAKECAVVT---HHRLEEK 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_BACTN (Prolyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=proS PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 6.189e-65 Identity = 74/113 (65.49%), Postives = 92/113 (81.42%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ + + WI SYRDLP+L NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEAE+EA++M+++Y +FA ++ A+PV+ G KS E FAGA TYTIEAMM D Sbjct: 123 IRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRLFLRTAEFLWQEGHTAHATREEAEEEAIRMLNVYGEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQD 235 HSP 2 Score: 110.923 bits (276), Expect = 6.189e-65 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 +T RS++++ WY D++ A+LA+ VRG MVI+PYGYAIWE +Q L+ FKETGH N YFP IP SF+ +EA HVEGF+ E A+VT Sbjct: 8 LTKRSENYSQWYNDLVVKADLAEQSAVRGCMVIKPYGYAIWEKMQRQLDDMFKETGHVNAYFPLLIPKSFLSREAEHVEGFAKECAVVT 96
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_SALRD (Prolyl-tRNA synthetase OS=Salinibacter ruber (strain DSM 13855) GN=proS PE=3 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.052e-64 Identity = 74/113 (65.49%), Postives = 89/113 (78.76%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ +++WI SYRDLPLL NQWANV RWEMR + F+RT EFLWQEGHTAHAT EA +EA +M+D+YT FA E+ A+PV+ GRK++ E F GA TY IEAMM D Sbjct: 119 VRPTSETIIWDTYSKWIQSYRDLPLLYNQWANVVRWEMRPRLFLRTAEFLWQEGHTAHATETEAVEEAERMLDVYTTFAEEYMAMPVLQGRKTESERFPGAVDTYCIEAMMQD 231 HSP 2 Score: 112.849 bits (281), Expect = 1.052e-64 Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 +TPR +D++ WY DV+ N +LA+ P RG M+I+P G A+WE ++D L+ FK+TGH N YFP FIP ++E+EA HVEGF+ E A+VT Sbjct: 5 VTPRDEDYSQWYQDVVRNGQLAENSPARGCMIIKPNGMALWENMRDQLDQMFKDTGHQNYYFPLFIPERYMEREAEHVEGFAKECAVVT 93
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CLOPH (Prolyl-tRNA synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=proS PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.373e-64 Identity = 69/113 (61.06%), Postives = 84/113 (74.34%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET+ ++ I SYRDLP L NQW +V RWE T+PF+RTLEFLWQEGHTAHAT EEAE+ +QM+++Y F E AIP++ GRK+ E FAGA TYTIEA+M D Sbjct: 112 VRPTSETLFCDFYSHIIESYRDLPKLYNQWCSVVRWEKTTRPFLRTLEFLWQEGHTAHATAEEAEERTIQMLNLYADFCEEVLAIPMVRGRKTDKEKFAGAEATYTIEALMHD 224 HSP 2 Score: 121.709 bits (304), Expect = 1.373e-64 Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT +DF WY DV+ AEL DY VRG + RP GYAIWE IQ L+ +FK TG N+Y P FIP S + KE HVEGF+PE+A VT GGG++L+E+L Sbjct: 11 ITSMDEDFAQWYTDVVKKAELVDYSGVRGCTIFRPAGYAIWENIQKELDARFKATGVENVYMPMFIPESLLNKEKDHVEGFAPEVAWVTHGGGEQLQERL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MAGSA (Prolyl-tRNA synthetase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=proS PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.789e-64 Identity = 72/113 (63.72%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ F +WI SYRDLP+LVNQWANV RWEMR + F+RT EFLWQEGHTAHAT EEA E ++M+++Y A E A+PVI G K E F GA +TY+IEAMM D Sbjct: 121 VRPTSETIIGDAFARWIQSYRDLPMLVNQWANVVRWEMRPRIFLRTAEFLWQEGHTAHATAEEAMDETLKMLEVYRVMAEEVLAMPVIVGEKPAHERFPGADKTYSIEAMMQD 233 HSP 2 Score: 115.161 bits (287), Expect = 1.789e-64 Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 248 RERVITP-RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526 ++ +TP R ++F WY VI +++A+ PVRG MVI+P+GY IWEAIQ L+ + KETGH N YFP FIP SF+EKEA+HVEGF+ E+A+VT Sbjct: 5 KKTAVTPTREENFPEWYQQVIKASDMAENSPVRGCMVIKPWGYGIWEAIQRDLDRRIKETGHENCYFPLFIPLSFLEKEAAHVEGFAKEMAVVT 98
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLSY (Prolyl-tRNA synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=proS PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.968e-64 Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ + +++WI SYRDLPLL NQWANV RWEMRT+PF+RT EF WQEGHTAHAT EAE+E ++++ D+Y F + A+PVI G K++ E F GA R+Y IEAMM D Sbjct: 108 IRPTSETIIGYFYSKWIRSYRDLPLLYNQWANVMRWEMRTRPFLRTAEFWWQEGHTAHATEAEAEEETLRILHDVYADFVEKEMAVPVIRGLKTEKEKFPGALRSYCIEAMMQD 221 HSP 2 Score: 114.005 bits (284), Expect = 3.968e-64 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 251 ERVITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 + VIT RS D+N WYLD++ A+LA+ V RG +V++ +G+AIWE +Q L+ + K TGH+N+ FP IP SFI KEA HVEGF+PE+A VT GG+EL E + Sbjct: 3 KEVITQRSVDYNQWYLDIVREADLAEVAEVVRGCIVVKAHGWAIWELMQRALDDRIKATGHANVQFPLLIPKSFIMKEAEHVEGFAPEVAEVTRAGGEELAEPYI 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLAA (Prolyl-tRNA synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=proS PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.968e-64 Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSETI+ + +++WI SYRDLPLL NQWANV RWEMRT+PF+RT EF WQEGHTAHAT EAE+E ++++ D+Y F + A+PVI G K++ E F GA R+Y IEAMM D Sbjct: 108 IRPTSETIIGYFYSKWIRSYRDLPLLYNQWANVMRWEMRTRPFLRTAEFWWQEGHTAHATEAEAEEETLRILHDVYADFVEKEMAVPVIRGLKTEKEKFPGALRSYCIEAMMQD 221 HSP 2 Score: 114.005 bits (284), Expect = 3.968e-64 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 251 ERVITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 + VIT RS D+N WYLD++ A+LA+ V RG +V++ +G+AIWE +Q L+ + K TGH+N+ FP IP SFI KEA HVEGF+PE+A VT GG+EL E + Sbjct: 3 KEVITQRSVDYNQWYLDIVREADLAEVAEVVRGCIVVKAHGWAIWELMQRALDDRIKATGHANVQFPLLIPKSFIMKEAEHVEGFAPEVAEVTRAGGEELAEPYI 107
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_OCEIH (Prolyl-tRNA synthetase OS=Oceanobacillus iheyensis GN=proS PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.968e-64 Identity = 65/113 (57.52%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE + ++ IHSYRDLP L NQW NV RWE T+PF+R+ EF WQEGHTAHAT EEA +E +M++ Y K E+ A+PV+ GRK+ E FAGA T TIEA+M D Sbjct: 113 VRPTSEVLFCDYYSNNIHSYRDLPKLYNQWGNVVRWEKTTRPFLRSSEFHWQEGHTAHATDEEATEETNRMLETYAKLVEEYLAVPVLKGRKTDKEKFAGAKFTLTIEALMHD 225 HSP 2 Score: 129.798 bits (325), Expect = 3.968e-64 Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT DF WY DV+ A+L DYG VRGTM+I+PYGYAIWE I++ L+ FKETGH+N+ FP FIP S ++KE HVEGF+PE+A VT GG +EL E++ Sbjct: 12 ITAMEDDFAQWYTDVVKQADLVDYGQVRGTMIIKPYGYAIWENIKNELDRMFKETGHTNVAFPLFIPESLLQKEKDHVEGFAPEVAWVTHGGEEELTERI 111 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |