FC877936
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP2_BACCZ (Prolyl-tRNA synthetase 2 OS=Bacillus cereus (strain ZK / E33L) GN=proS2 PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 4.711e-62 Identity = 60/113 (53.10%), Postives = 82/113 (72.57%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911
+RPTSET+ F++ + SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y F ++ AIPVI G+K++ E FAGA TYTIE++M D
Sbjct: 110 IRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHD 222 HSP 2 Score: 124.02 bits (310), Expect = 4.711e-62 Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 2
Query: 254 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559
+ IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K TGH N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L
Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERL 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP2_BACC1 (Prolyl-tRNA synthetase 2 OS=Bacillus cereus (strain ATCC 10987) GN=proS2 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.711e-62 Identity = 60/113 (53.10%), Postives = 82/113 (72.57%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911
+RPTSET+ F++ + SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y F ++ AIPVI G+K++ E FAGA TYTIE++M D
Sbjct: 110 IRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHD 222 HSP 2 Score: 124.02 bits (310), Expect = 4.711e-62 Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 2
Query: 254 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559
+ IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K TGH N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L
Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERL 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_RHOBA (Prolyl-tRNA synthetase OS=Rhodopirellula baltica GN=proS PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.044e-61 Identity = 68/114 (59.65%), Postives = 86/114 (75.44%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914
VRPTSETI+ + +W+ SYRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHT HAT EEA +E +M+++Y FA A+PVI G K+ +E F GA T +IEAMM D+
Sbjct: 127 VRPTSETIIGATYAKWVQSYRDLPILINQWANVVRWEMRTRMFLRTAEFLWQEGHTVHATSEEAVEETEKMVEVYRDFAENWMAMPVIVGSKTPLERFPGAVETLSIEAMMQDR 240 HSP 2 Score: 108.227 bits (269), Expect = 1.044e-61 Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 2
Query: 248 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT 526
R + R +++ WY VI A+LA+ PVRG MVI+P+GY +WE +Q L+ FK TGH N YFP FIP SF+EKEA HVEGF+ E A+VT
Sbjct: 11 RTAISPTREENYPEWYQQVIRAADLAENSPVRGCMVIKPWGYQLWENVQRALDDMFKATGHQNAYFPLFIPMSFLEKEAEHVEGFAKECAVVT 103
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CLOBL (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=proS PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.776e-61 Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911
VRPTSET+ + + + SY+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++ + A+PV+ G+K+ E FAGA TYTIE++M D
Sbjct: 112 VRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHD 224 HSP 2 Score: 126.331 bits (316), Expect = 1.776e-61 Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 2
Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559
ITP +DF WY D++ AELADY +RG M+IRP GYAIWE IQ Y++ K KE GH N+ P FIP + ++KE HVEGF+PE+A VT GG EL E+L
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CLOBK (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=proS PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.776e-61 Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911
VRPTSET+ + + + SY+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++ + A+PV+ G+K+ E FAGA TYTIE++M D
Sbjct: 112 VRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHD 224 HSP 2 Score: 126.331 bits (316), Expect = 1.776e-61 Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 2
Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559
ITP +DF WY D++ AELADY +RG M+IRP GYAIWE IQ Y++ K KE GH N+ P FIP + ++KE HVEGF+PE+A VT GG EL E+L
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CLOBJ (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=proS PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.776e-61 Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911
VRPTSET+ + + + SY+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++ + A+PV+ G+K+ E FAGA TYTIE++M D
Sbjct: 112 VRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHD 224 HSP 2 Score: 126.331 bits (316), Expect = 1.776e-61 Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 2
Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559
ITP +DF WY D++ AELADY +RG M+IRP GYAIWE IQ Y++ K KE GH N+ P FIP + ++KE HVEGF+PE+A VT GG EL E+L
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP2_BACAH (Prolyl-tRNA synthetase 2 OS=Bacillus thuringiensis (strain Al Hakam) GN=proS2 PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.776e-61 Identity = 61/113 (53.98%), Postives = 82/113 (72.57%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911
VRPTSET+ F++ + SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y F ++ AIPVI G+K++ E FAGA TYTIE++M D
Sbjct: 110 VRPTSETLFCEHFSKIVQSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHD 222 HSP 2 Score: 121.709 bits (304), Expect = 1.776e-61 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 2
Query: 254 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559
+ IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K T H N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L
Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATSHENVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERL 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CLOBM (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=proS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.315e-61 Identity = 58/113 (51.33%), Postives = 83/113 (73.45%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911
VRPTSET+ + + + SY+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++ + A+PV+ G+K++ E FAGA TYTIE++M D
Sbjct: 112 VRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTEKEKFAGADDTYTIESLMHD 224 HSP 2 Score: 125.176 bits (313), Expect = 2.315e-61 Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 2
Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559
ITP +DF WY D++ AELADY ++G M+IRP GYAIWE IQ Y++ K KE GH N+ P FIP + ++KE HVEGF+PE+A VT GG EL E+L
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIKGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CLOB6 (Prolyl-tRNA synthetase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=proS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.315e-61 Identity = 58/113 (51.33%), Postives = 83/113 (73.45%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911
VRPTSET+ + + + SY+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++ + A+PV+ G+K++ E FAGA TYTIE++M D
Sbjct: 112 VRPTSETLFCEHYAKIVQSYKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDMLAMPVVMGKKTEKEKFAGADDTYTIESLMHD 224 HSP 2 Score: 125.176 bits (313), Expect = 2.315e-61 Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 2
Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559
ITP +DF WY D++ AELADY ++G M+IRP GYAIWE IQ Y++ K KE GH N+ P FIP + ++KE HVEGF+PE+A VT GG EL E+L
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIKGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_ERYLH (Prolyl-tRNA synthetase OS=Erythrobacter litoralis (strain HTCC2594) GN=proS PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.128e-61 Identity = 70/113 (61.95%), Postives = 84/113 (74.34%), Query Frame = 3
Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911
VRPTSETI +WI S+RDLPLL NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEA++ + M+++Y A E A+PVIAG K + E F GA T++IEAMM D
Sbjct: 123 VRPTSETIFGDAMARWIQSWRDLPLLTNQWANVVRWEMRTRMFLRTSEFLWQEGHTAHATAEEAKEHTLTMLEVYRAHAEEDLALPVIAGEKPENERFPGAVETWSIEAMMQD 235 HSP 2 Score: 108.612 bits (270), Expect = 5.128e-61 Identity = 59/118 (50.00%), Postives = 74/118 (62.71%), Query Frame = 2
Query: 248 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT----IGGGK---------ELEEKLV 562
R + R DF AWY VI+ A+LA+ VRG MVI+P+GY IWE IQ L+ + K TGH N+YFP FIP S E+EA HVEGF+ E+A+VT IG G+ +LEE LV
Sbjct: 5 RHALTVKREDDFAAWYQAVIAEADLAEESGVRGCMVIKPWGYGIWERIQRLLDDRIKATGHENVYFPIFIPLSNFEREAEHVEGFAKEMAVVTHHRLIGDGEGGLIPDPEAKLEEPLV 122 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |