FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_NOVAD (Prolyl-tRNA synthetase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=proS PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.493e-57 Identity = 66/113 (58.41%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET++ ++WI S+RDLPLL NQWANV RWEMRT+ F+RT EFLWQEGHTAH +A KE ++ +++Y FA A+PVIAG K + E F GA T++IEAMM D Sbjct: 125 VRPTSETVIGAAMSRWIQSWRDLPLLTNQWANVVRWEMRTRMFLRTSEFLWQEGHTAHVDEADAMKETLRALEMYRAFAEGPLAMPVIAGPKPENERFPGAVETFSIEAMMQD 237 HSP 2 Score: 103.605 bits (257), Expect = 2.493e-57 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVT----IGGGK---------ELEEKLV 562 R+ DF WY VI+ AELA+ VRG MVI+P+GY IWE IQ ++ + KE G N YFP FIP S+ KEA HVEGF+ E+A+VT I GK +LEE LV Sbjct: 14 RADDFAQWYQAVIAEAELAEESGVRGCMVIKPWGYGIWERIQKLMDAEIKEAGVENCYFPLFIPLSYFTKEAEHVEGFAKEMAVVTHHRLISDGKGGLTPDPEAKLEEPLV 124
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_AYWBP (Prolyl-tRNA synthetase OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=proS PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 5.527e-57 Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE + + +++ I SYRDLP L NQW NV RWE TKPF+R EFLWQEGHT HAT +EA ++ + ++DIY K + A+P + G+K++ E FAGA TY+IEA+M D Sbjct: 111 IRPTSEILFSQYYSKTITSYRDLPKLYNQWCNVVRWEKTTKPFLRGKEFLWQEGHTVHATEQEAMQQTLSILDIYQKLGKDLLALPFVCGKKTETEKFAGALITYSIEALMHD 223 HSP 2 Score: 109.768 bits (273), Expect = 5.527e-57 Identity = 48/105 (45.71%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 248 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 R + + R DF WY D+ AEL Y +G ++ PYGYA+WE IQ +LN ++TGH N+YFP P KE H++GFSPE A++T G K L EKLV Sbjct: 6 RVKTVATRLSDFGKWYTDICLKAELIAYSEAKGFIIYLPYGYALWENIQKHLNCTLQKTGHQNVYFPLVFPEKLFHKEKEHIQGFSPEAAMITTTGKKNLSEKLV 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_NATPD (Prolyl-tRNA synthetase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=proS PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.839e-56 Identity = 64/114 (56.14%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEM-RTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE+I+ +W+ SYRDLPL VNQW +V RWE TKPF RT EFLWQEGHTAHAT E A E M ++ Y + E AIP + GRK + + F GA T TIEA+M D Sbjct: 110 VRPTSESIITPFIAEWVRSYRDLPLRVNQWCSVVRWEATETKPFFRTKEFLWQEGHTAHATEESAWDETMTRLEQYERLYEEVMAIPGMTGRKPEHDKFPGADTTTTIEALMPD 223 HSP 2 Score: 110.538 bits (275), Expect = 7.839e-56 Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 290 WYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 WY +V+ A LADY P+ G +V RP GYA+WE +QD+L+ FKETG N YFP FIP S++E+E V+GF PE+A VT GG ELEE+L Sbjct: 19 WYAEVVQKAGLADYAPMGGFIVTRPRGYALWERLQDHLDGWFKETGVQNTYFPMFIPESYLEREKDIVDGFDPEVAWVTHGGHDELEERL 108
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PHYAS (Prolyl-tRNA synthetase OS=Phytoplasma australiense GN=proS PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.737e-55 Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +RPTSE + + + + I SYRDLP L NQ+ NV RWE TKPF+R EFLWQEGHT HAT +EA + + I +Y K E A+P + GRK++ E FAGA TY+IEA+M D Sbjct: 111 IRPTSEVLFSQYYAKIISSYRDLPKLYNQFCNVVRWEKATKPFLRGKEFLWQEGHTVHATEKEALDQTLFAIQLYEKLGKELLALPFVCGRKTEKEKFAGALITYSIEALMQD 223 HSP 2 Score: 112.849 bits (281), Expect = 1.737e-55 Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 248 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLV 562 R +T DF WY D+ AEL Y V+G ++ PYGYA+WE IQ YLN +F++TGH N+YFP +KE H++GFSPE A++T G KEL EKLV Sbjct: 6 RVEKVTSHLSDFGQWYTDICLKAELIAYSDVKGFIIYLPYGYALWENIQKYLNYEFQKTGHQNVYFPLVFSEKLFQKEKDHIQGFSPEAAMITSTGQKELFEKLV 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_HALLT (Prolyl-tRNA synthetase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=proS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.524e-55 Identity = 62/114 (54.39%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEM-RTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE+I+ +QW+ S+RDLPL VNQW +V RWE TKPF RT EFLWQEGHTAHAT E A +E M +D Y + A+PV+ G+K + F GA T T+EA+M D Sbjct: 114 VRPTSESIITPYISQWVRSHRDLPLRVNQWCSVVRWEATETKPFFRTKEFLWQEGHTAHATHEGAWEETMTRLDQYASVYEDLLAMPVLKGQKPDHDKFPGAETTTTVEALMPD 227 HSP 2 Score: 109.768 bits (273), Expect = 8.524e-55 Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 269 RSQDFNAWYLDVISNAELADYGP--VRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 +S + WY +V+ A LADYGP + G +V RP YA+WE +Q +L+ KFK+TG N YFP FIP S++E+E VEGF PE+A VT G KELEE+L Sbjct: 14 KSHNTGEWYAEVVQKAGLADYGPEGMSGFIVTRPRAYAVWERLQGFLDAKFKDTGVQNAYFPLFIPESYLEREKDIVEGFDPEVAWVTEAGNKELEERL 112
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_MYCPU (Prolyl-tRNA synthetase OS=Mycoplasma pulmonis GN=proS PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.575e-53 Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 3 Query: 540 RN*KKNLWL*QVRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 +N +N++L RPTSE + F I SY+DLP + NQWANV RWE T PF+R+ EFLWQEGH++H + EA K +M+ Y KF + AIP I G+K+ E F+GA TYT+EAMM D Sbjct: 100 KNLSENIYL---RPTSEVLFQKFFKAEIESYKDLPKIYNQWANVIRWEKTTNPFLRSTEFLWQEGHSSHESAIEARKFTREMLKTYCKFLRKFLAIPTIMGKKTPREKFSGAYSTYTLEAMMKD 220 HSP 2 Score: 105.145 bits (261), Expect = 1.575e-53 Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITP ++F WY DV+ N EL DYGPV+GT++ +P Y IWE IQ N K G N+Y P IP S ++ E H+EGF+PELA +T G K L E + Sbjct: 7 ITPLEENFAKWYTDVVKNGELIDYGPVKGTLIFKPNSYGIWENIQLQFNKILKAKGIKNVYLPLLIPESLMKAEFEHIEGFAPELATLTKVGSKNLSENI 106
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_HALSA (Prolyl-tRNA synthetase OS=Halobacterium salinarium GN=proS PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.007e-52 Identity = 61/114 (53.51%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEM-RTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE+I+ +QW+ S+RDLPL VNQW +V RWE TKPF RT EFLWQEGHTAHAT E A E +D Y + + IPV+ GRK + F GA T ++EA+M D Sbjct: 112 VRPTSESIIAPYLSQWVRSHRDLPLRVNQWNSVVRWEATETKPFFRTKEFLWQEGHTAHATDEAAWAETTLRLDQYHRLYEDVLGIPVLRGRKPDHDKFPGADTTMSVEALMPD 225 HSP 2 Score: 106.686 bits (265), Expect = 1.007e-52 Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 2 Query: 290 WYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 WY +V+ A LADY P+ G +V RP GYA+WEAIQD L+ FK+TG N YFP FIP ++E+E VEGF PE+A VT GG +L+++L Sbjct: 21 WYAEVVQKAGLADYAPMGGFIVTRPRGYALWEAIQDNLDGWFKDTGVENAYFPMFIPEDYLEREKDIVEGFDPEVAWVTQGGHDDLDQRL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_HALS3 (Prolyl-tRNA synthetase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=proS PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.007e-52 Identity = 61/114 (53.51%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEM-RTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE+I+ +QW+ S+RDLPL VNQW +V RWE TKPF RT EFLWQEGHTAHAT E A E +D Y + + IPV+ GRK + F GA T ++EA+M D Sbjct: 112 VRPTSESIIAPYLSQWVRSHRDLPLRVNQWNSVVRWEATETKPFFRTKEFLWQEGHTAHATDEAAWAETTLRLDQYHRLYEDVLGIPVLRGRKPDHDKFPGADTTMSVEALMPD 225 HSP 2 Score: 106.686 bits (265), Expect = 1.007e-52 Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 2 Query: 290 WYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 WY +V+ A LADY P+ G +V RP GYA+WEAIQD L+ FK+TG N YFP FIP ++E+E VEGF PE+A VT GG +L+++L Sbjct: 21 WYAEVVQKAGLADYAPMGGFIVTRPRGYALWEAIQDNLDGWFKDTGVENAYFPMFIPEDYLEREKDIVEGFDPEVAWVTQGGHDDLDQRL 110
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_HALMA (Prolyl-tRNA synthetase OS=Haloarcula marismortui GN=proS PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.712e-52 Identity = 59/114 (51.75%), Postives = 73/114 (64.04%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEM-RTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE+I+ QW S+RDLP+ +NQW +V RWE TKPF RT EFLWQEGHTAHA + A +E M +D Y + E A+P + GRK + F GA T TIE +M D Sbjct: 111 VRPTSESIIAPFMAQWTRSHRDLPMRLNQWCSVVRWEATETKPFFRTKEFLWQEGHTAHADEDGAWEETMTRLDQYARLYEEVMAMPPLKGRKPPHDKFPGAHTTTTIETLMPD 224 HSP 2 Score: 109.383 bits (272), Expect = 1.712e-52 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 2 Query: 290 WYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 WY +V+ A LADY P+ G +V RP GYAIWE IQ+ L+ FK+TG N YFP FIP S++EKE VEGF PE+A VT GG ELEE+L Sbjct: 20 WYAEVVQKAGLADYAPMGGFIVTRPRGYAIWERIQNNLDGWFKDTGVQNAYFPLFIPESYLEKEKDVVEGFDPEVAWVTHGGHNELEERL 109
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_HALWD (Prolyl-tRNA synthetase OS=Haloquadratum walsbyi (strain DSM 16790) GN=proS PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.395e-52 Identity = 63/114 (55.26%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEM-RTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSE+I+ +QWI SYRDLPL VNQW +V RWE TKPF RT EFLWQEGHTAHAT +A E M ++ Y + AIPV+ G K + + F GA T T+EA+M D Sbjct: 113 VRPTSESIIAPYLSQWIRSYRDLPLRVNQWTSVVRWEATETKPFFRTKEFLWQEGHTAHATRADAWAETMLRLNQYESTYEDLLAIPVLQGAKPEHDKFPGADTTTTVEALMPD 226 HSP 2 Score: 101.679 bits (252), Expect = 8.395e-52 Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 290 WYLDVISNAELADYGP--VRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 WY +V+ AELA+YGP + G +V RP Y +WE +Q YL+ +FK+TG N YFP FIP ++E+E VEGF PE+A V G ELEE+L Sbjct: 20 WYAEVVQKAELANYGPEGMSGFIVTRPRAYGLWERVQSYLDTRFKQTGVQNAYFPLFIPEGYLEREKEIVEGFDPEVAWVEQAGRNELEERL 111 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |