FC877945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_DESRM (3-dehydroquinate synthase OS=Desulfotomaculum reducens (strain MI-1) GN=aroB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.073e-22 Identity = 72/245 (29.39%), Postives = 120/245 (48.98%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIK---TKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHT-WSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE +K+L+ + + D D + R+ D+AGF A Y R +I+IPTT++ +D+ V KVAVN+ KN +GA++ P ++D L+TLPE +++ G AE+IK F L++ R++ T +V++ +IK + E + E G ++ YGHT + L+ HG A+++ M +A LA + G+LS ++ R+ L S GL Sbjct: 73 GEPSKTLEQASRLYDLAFDHALDRQSSVIALGGGVVGDLAGFVAATYMRGVPFIQIPTTLLAQVDSSVGGKVAVNHSRGKNMIGAFYQPQMVMIDVATLQTLPERELKAGLAEVIKYGVIWDGSFFTWLEKNYSRILNLDTTALEQVAETCCKIKASVVEQDE--------------REQGCRAILNYGHTVGHAIESLSGYGTYLHGEAVAMGMISAARLALNEGILSQQDFERIYRLISAVGL 303
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_MYCLE (3-dehydroquinate synthase OS=Mycobacterium leprae GN=aroB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.401e-22 Identity = 72/258 (27.91%), Postives = 116/258 (44.96%), Query Frame = 1 Query: 1 HRLELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHE 774 HR+E+ E K L I + + GI RK+ TDVAGFA A + R + + +PTT++G++DA V K +N KN +GA+H P L D L TLP ++ +G AE++K A DL++ + + G E+ R + + + + E L ++ YGHT + E RHG A+S+ + ++A LA G L D +R + + GL + ++ Sbjct: 67 HRIEIPD-----AEAGKDLSVMDFIWEVLGRIGIGRKDALVSFGGGAATDVAGFAAATWLRGVSIVHVPTTLLGMVDAAVGGKTGINTEAGKNLVGAFHQPLAVLADLATLETLPRKEIASGMAEVVKAGFIADPIILDLIEADPQASLDPMGG-----------VLPELIRRAVTVKAGVVSADEKESELREILNYGHTLAHAIERRERYEWRHGAAVSVGLVFAAELARVAGRLDDATAQRHHTILTSLGLPVSYD 308
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_MYCGI (3-dehydroquinate synthase OS=Mycobacterium gilvum (strain PYR-GCK) GN=aroB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.401e-22 Identity = 72/258 (27.91%), Postives = 118/258 (45.74%), Query Frame = 1 Query: 1 HRLELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHE 774 HR+E+ E K L I + G+ RK+ TDVAGFA A + R + + +PTT++G++DA V K +N KN +GA+H PA L+D L +LP ++ G AE++K A D+++ E + D G + E+ R + ++ + E L ++ YGHT + E RHG A+S+ + ++A L G L D+ R A+ + GL + ++ Sbjct: 64 HRIEIPD-----AEGGKELPVVGFIWQVLGRIGVGRKDAIVSLGGGAATDVAGFAAATWLRGIDIVHVPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPAAVLIDLATLESLPRNEIVAGMAEIVKAGFIADPVILDMIEADPEAAL--------DPSGAV---LPELIRRAVVVKAEVVAADEKESQLREILNYGHTLAHAIERRERYQWRHGAAVSVGLVFAAELGRLAGRLDDDTTERHRAILTSLGLPVTYD 305
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_MYCPA (3-dehydroquinate synthase OS=Mycobacterium paratuberculosis GN=aroB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.830e-22 Identity = 75/258 (29.07%), Postives = 116/258 (44.96%), Query Frame = 1 Query: 1 HRLELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHE 774 HR+E+ E K L + + + GI RK+ TDVAGFA A + R + + +PTT++G++DA V K +N KN +GA+H P L+D L TLP ++ G AE++K A DL++ + D GE+ E+ + I + + E L ++ YGHT E RHG A+S+ + ++A LA G L D RR + S GL + ++ Sbjct: 67 HRIEIPD-----AEDGKDLPVVGFLWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVDIVHVPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLHTLPPNELVAGMAEVVKAGFIADPAILDLIEADPRAAV--------DPSGEV---LAELVQRAIAVKADVVAADEKESELREILNYGHTLGHAIERRERYRWRHGAAVSVGLVFAAELARLAGRLDDATARRHRTILSALGLPVSYD 308
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_ARTAT (3-dehydroquinate synthase OS=Arthrobacter aurescens (strain TC1) GN=aroB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.830e-22 Identity = 66/209 (31.58%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 145 TDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDH 771 TD+AGF A + R I +PT+++G++DA V K +N KN +G++H PA L D L+TLP+ ++ +G AE+IK C + +LD L++ V D ++ + E+ I + + +L E GL ++ YGHT EL RHG A+S+ M ++A L+ G LSD + R + GL + + Sbjct: 112 TDLAGFVAATWLRGVKVIHMPTSLLGMVDASVGGKTGINTAEGKNLVGSFHPPAAVLADLDTLQTLPKNELISGMAEVIK---CGFIADPAILD-----LVEKNTDAVMDPGSDVVR---ELIERAISVKADVVSQDLKESGLREILNYGHTLGHAIELVERYSWRHGAAVSVGMMFAAELSRSVGRLSDADADRHRTILESLGLPITY 309
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_ALISL (3-dehydroquinate synthase OS=Aliivibrio salmonicida (strain LFI1238) GN=aroB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22 Identity = 75/248 (30.24%), Postives = 119/248 (47.98%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAAD--EINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPL---RHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSM 765 GE+ K+LDTF I+ + + R DV GFA A Y+R ++I++PTT++ +D+ V K A+N+ KN +GA++ P ++D L+TLPE + G AE+IK FD LDE E+L DHD + + +I + + + K E G+ ++ GHT+ H + + HG A+S +A A GL+S +E R+ AL +A L + Sbjct: 73 GEQYKNLDTFNQILTFLLEENHSRDVTIVALGGGVVGDVVGFASACYQRGVDFIQVPTTLLSQVDSSVGGKTAINHPLGKNMVGAFYQPKAVIIDINCLKTLPEREFAAGMAEVIKYGIIIDSDFFDWLDENMEKLY------ALDHDALVYAISRCCQIKADVVAKDEK-------ESGVRALLNLGHTFG--HAIEAEMGYGNWLHGEAVSAGTVMAAVTAQKEGLISQQEVDRICALLKKAKLPL 305
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_SULSO (3-dehydroquinate synthase OS=Sulfolobus solfataricus GN=aroB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22 Identity = 69/245 (28.16%), Postives = 113/245 (46.12%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEI-GLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMD 768 GE K L + ++V+ + + R + TDVAGF + Y R N I +PTT +G++DA + K VN+ N KN +G ++ P+ + D FL TLP +++ G AE+IK +D L E+++ + K+A ++I + L + + E G+ V+ +GHT E + HG+AIS+ M A +A + G + +L L GL D Sbjct: 62 GESTKELSSVISLVEKLFEKNFDRGDYIIGVGGGTVTDVAGFLASIYLRGLNLINVPTTFLGMVDAAIGGKNGVNFNNIKNLIGTFYQPSMIISDLEFLETLPIEELKKGLAEVIKYGLTLDKELYDYLSLNKEKIL-----------NKDKQALEDIIFRSTLDKLSIVKEDERETKGIRIVLNFGHTIGHAIEAGSSFNVPHGYAISVGMVCEAKMAEELGYAEEGVVEDVLWLLQIYGLPYD 295
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_THETN (3-dehydroquinate synthase OS=Thermoanaerobacter tengcongensis GN=aroB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.324e-22 Identity = 72/247 (29.15%), Postives = 117/247 (47.37%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHT-WSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHE 774 GE +K+++ +++ D G++R D+AGF A Y R ++I+IPTT++ +D+ V KVAVN KN +GA++ P +D L TL + +V G AE+IK F ++E +++ K K+ I + K+ + + E L ++ +GHT + L HG A++I MAY A LA + G + + R+L L RAGL D+E Sbjct: 73 GETSKTMEMAQRLLEVAYDSGLLRDSSIIALGGGVVGDIAGFVAATYMRGIDFIQIPTTLLAQVDSSVGGKVAVNLKKGKNIVGAFYQPKMVYIDTSVLGTLNKREVLGGLAEVIKYGVIWDFDLFTYIEENLGDILRLK-----------KEDLTYIVKRSCEIKAKVVSLDEKEENLRAILNFGHTIGHAIEALTGYERYIHGEAVAIGMAYEARLAFNLGYIDEGYLERILNLIKRAGLPADYE 308
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_MYCVP (3-dehydroquinate synthase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=aroB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.324e-22 Identity = 71/258 (27.52%), Postives = 118/258 (45.74%), Query Frame = 1 Query: 1 HRLELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHE 774 HR+E+ E K L I + + G+ RK+ TDVAGFA A + R + + +PTT++G++DA V K +N KN +GA+H PA L+D L +LP ++ G AE++K A D+++ + + D G++ E+ R + ++ + E L ++ YGHT + E RHG A+S+ + ++A L G L D R A+ GL + ++ Sbjct: 64 HRIEIPD-----AEGGKELPVVGFIWEVLGRIGLGRKDAIVSLGGGAATDVAGFAAATWLRGVDIVHVPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPAAVLIDLATLESLPRNEIVAGMAEIVKAGFIADPVILDMIEADPQAAL--------DPTGQV---LPELIRRAVVVKAEVVAADEKESQLREILNYGHTLAHAIERRERYQWRHGAAVSVGLVFAAELGRLAGRLDDATAERHRAILISLGLPVTYD 305
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_CHLP8 (3-dehydroquinate synthase OS=Chlorobaculum parvum (strain NCIB 8327) GN=aroB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.953e-22 Identity = 69/238 (28.99%), Postives = 118/238 (49.58%), Query Frame = 1 Query: 40 EKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWS-PLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSR 750 E +KS+ T + M + + R D+ G+ A+Y R +++PTT++ + D+ + KVA+N+ KN +G +H PA L+D FLRTLP ++ G AE++K A FD+L E + + + + +S D ++R+ + +E GL + +GHT++ L ++A LRHG A++I MA + L+ G L++ E LAL +R Sbjct: 67 ETSKSVSTAWKLYGQMIETDVDRSWNLLCVGGGVVGDLGGYIAASYYRGIPVVQLPTTLLAMTDSSIGGKVAINHPLGKNLIGYFHMPALVLIDPAFLRTLPAREIFGGMAEVVKYGFIADRKFFDMLAEHWDEVTRLEEPWIS----------DAVSRSAFTKADVVEKDFRETSGLRATLNFGHTFAHGLEKMAEYRNLRHGEAVTIGMACALYLSYRLGFLAEAELNEGLALIAR 294 The following BLAST results are available for this feature:
BLAST of FC877945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877945 ID=FC877945; Name=FC877945; organism=Citrus clementina; type=EST; length=881bpback to top |