FC877945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_PSYA2 (3-dehydroquinate synthase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=aroB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 60/242 (24.79%), Postives = 104/242 (42.98%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPV-PLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE+ K+ + I D + R D+ GF+ A++ R N+I+IPTT++ +D+ V K +N+ KN +GA+ P L D L+TLP ++ G AE+IK + L+ ++ + GE K E + + + E G+ ++ +GHT+ + E HG A++ M +A L+ G L+ +E R+ + A L Sbjct: 86 GEQYKNQSSINQIYDVLMAAHFNRDVTLIALGGGVIGDMTGFSAASFMRGVNFIQIPTTLLSQVDSSVGGKTGINHPQGKNMIGAFWQPQMVLADMSTLKTLPARELSAGLAEVIKYALIMDADFLTWLEHNLPAMMALNLVIL----GEAVKRCCEYKAD-------IVAQDERESGVRALLNFGHTFGHVIETHEGYGNWLHGEAVAAGMVQAAELSQKIGWLTSDEVARVKRVLLLANL 316
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_PSEMY (3-dehydroquinate synthase OS=Pseudomonas mendocina (strain ymp) GN=aroB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 63/242 (26.03%), Postives = 102/242 (42.15%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPL-RHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE K+ +T I D + R+ D+AGFA A Y+R ++I++PTT++ +D+ V K +N+ KN +GA++ P L+D L TLP ++ G AE+IK P L+ L R D D A ++ + E G+ + GHT+ E + HG A++ + +++ G +S E R + L AGL Sbjct: 70 GEAFKNWETLQLIFDGLLTARHDRRTTVVALGGGVIGDMAGFAAACYQRGVDFIQVPTTLLSQVDSSVGGKTGINHPLGKNMVGAFYQPKAVLIDTASLDTLPARELSAGLAEVIKYGLICDEPFLGWLEANMAAL------RSLDQD-----ALTYAIERSCAAKAQVVGADERESGVRATLNLGHTFGHAIETEQGYGVWLHGEAVAAGTVMALEMSHRLGWISVAERDRGVRLLQAAGL 300
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_PARD8 (3-dehydroquinate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=aroB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 57/214 (26.64%), Postives = 96/214 (44.86%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIK---ISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHE---LAPPVPLRHGHAIS 660 G+ K + I ++++ G R TD+ GFA A ++R I IPTT++ +DA V K +N+ KN +G+++ P +D FLRTL + +G+AE+IK ISS + + L D + + ++ G+ + E + E P E G+ + + +GHT E P+ HGHA++ Sbjct: 61 GDMNKGFVSLAQIWTALSNEGASRNSLLVNLGGGMITDMGGFAGATFKRGIRTINIPTTLMASVDAAVGGKTGINFNGLKNEVGSFYPPLCVFIDCDFLRTLDRDNILSGYAEMIKHGLISSMENYASVMLFD-----IDTMNYSYLNSLVGQ---------SVAVKERIVEEDPK--EQGIRKALNFGHTIGHAFESLSFLKMRPILHGHAVA 258
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_LACPL (3-dehydroquinate synthase OS=Lactobacillus plantarum GN=aroB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 59/250 (23.60%), Postives = 108/250 (43.20%), Query Frame = 1 Query: 10 ELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 ++++ GE++KS +++D ++ R + D+AGF + Y R I++PT+++ +D+ V K A++ KN +G+++ P ++D L TLP + G+ E++K CA L D +++ + A D I + F+ ++ + HE G +++ +GHT EL L HG A++I + L GL L A GL Sbjct: 66 KVRVMTVPAGEESKSWSQVQSLIDQLSAAHFSRSDGVLALGGGVVGDLAGFVASIYMRGIALIQVPTSLLAQVDSSVGGKTAIDLPTGKNLVGSFYQPDLVVIDPAILVTLPPRMLAEGYGEIVK---CAALVGGDFWQ---------SLHQITSVAAILPAAPDLIAASVAFK-ARVVMADEHEQGQRQLLNFGHTIGHAVELLADGQLMHGEAVAIGLVQVCRLFAAHGLAPTSLTSTLKARLMAVGL 302
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_JANSC (3-dehydroquinate synthase OS=Jannaschia sp. (strain CCS1) GN=aroB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 64/246 (26.02%), Postives = 102/246 (41.46%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVP--LRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMD 768 GE KS I D + + R + D+AGFA A +RR +++IPT+++ +D+ V K +N KN +GA+H P+ L D L TL G+ E+ K P F+ L+ + K D +++ E R + + + E G ++ GHT+ E A L HG ++I A + L+ GL S E+ R+ A + G D Sbjct: 74 GEATKSWPHLQRIADWLLSERVERADIVIAFGGGVIGDLAGFAAAIHRRGIRFVQIPTSLLAQVDSSVGGKTGINAPQGKNLIGAFHQPSLVLADIDVLGTLMPRDFLAGYGEVAKYGMLGDAPFFEWLEANGPAMAK--------GDPALRQ---EAVRRSVQMKADIVARDETEQGDRALLNLGHTFCHALEAATGYSDRLLHGEGVAIGCALAFELSARLGLCSQEDPSRVRAHLAAMGTRRD 308
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_AGRRK (3-dehydroquinate synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=aroB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 57/244 (23.36%), Postives = 101/244 (41.39%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLR---HGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GEK KS + + D++ I R + D++GFA RR ++++PT+++ +D+ V K +N + KN +G +H P L D L TL + + R G+AE+ K F L+ + + R+ + +D + + E G ++ GHT+ E A R HG ++I M + ++ L S ++ +R+ A GL Sbjct: 82 GEKTKSFEHLMTVCDAVLTARIERNDAVIALGGGVIGDLSGFAAGIVRRGVRFVQVPTSLLSQVDSSVGGKTGINTHHGKNLVGVFHQPDLVLADTDVLNTLSQREFRAGYAEVAKYGLIDKPDFFAWLEANWQDVFSGGAARIEAIAASCQAKSDVV------------VADERENGPRALLNLGHTFGHALEAATAYDSRRLVHGEGVAIGMVLAHEFSSRLNLASPDDAKRVDAHLKTVGL 313
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_SYMTH (3-dehydroquinate synthase OS=Symbiobacterium thermophilum GN=aroB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 58/242 (23.97%), Postives = 103/242 (42.56%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEE-HRRLLALFSRAGL 759 GE +KSL ++ S + R D+AGF A Y R +++PTT++ +D+ + K V+ KN +GA+H P+ + D L++LP ++ G AE++K + DE + ++ + G V D + + + ++ + E GL ++ +GHT E A HG +++ M +A +A G+ + RL L R L Sbjct: 69 GEASKSLSQAYSLYSSCVRAELDRTSAVVALGGGVVGDLAGFVAATYLRGIPLVQVPTTLLAQVDSSIGGKTGVDLPQGKNLVGAFHQPSLVVADVETLKSLPRRELSAGMAEVVKHGV--------IRDEEFLKYVEVQVGNVLAGDPAV---LERVVAESCRIKAEVVAADPREKGLRAILNFGHTVGHALEAAIGFRWLHGECVAVGMVAAAHIARHSGIAQEGRLELRLTRLLERLDL 299
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_STRZJ (3-dehydroquinate synthase OS=Streptococcus pneumoniae (strain JJA) GN=aroB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 57/256 (22.27%), Postives = 115/256 (44.92%), Query Frame = 1 Query: 10 ELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHT-WSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHE 774 ++ + + GE+ K+L T + + + G+ R + D+AGF + Y R ++++IPT++ +D+ + K VN KN +G + P L+D L TL + ++ G E+IK + LL E + + +H + + + ++ R + E E N G+ + +GHT + A + HG A+++ M + +A ++GL+ + + + + GL +D+E Sbjct: 63 QVAVFDFLEGEERKNLTTVQKVYEFLVKQGLTRSDGIVALGGGVVGDLAGFVASTYMRGIHFVQIPTSLTAQVDSSIGGKTGVNTPFAKNMVGTFAQPDGVLIDPLVLETLGKRELIEGMGEVIKYGLIEDPELWALLTE-----LNGSVESILEHAETLIEHSCQVKRKMVVED---ELDN----GIRLYLNFGHTIGHAIEATAGYGKVMHGEAVAMGMVQISKVAEEKGLMPAGITQSITEMCQKFGLPVDYE 306
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_RHOPA (3-dehydroquinate synthase OS=Rhodopseudomonas palustris GN=aroB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 59/243 (24.28%), Postives = 100/243 (41.15%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVP--LRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE +KS + +++ I R + D+AGF+ + RR +++++PT+++ +D+ V K +N KN +G +H P L D L TL Q R G+AE+ K + F L+ L R + A + R+ E G ++ GHT+ E A L HG ++I M +A + +RG++ + RL + GL Sbjct: 82 GESSKSYAGLEQVCEALIAAKIERNDLVIALGGGVIGDLAGFSASLLRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLIGTFHQPVLVLADTAILDTLSPRQFRAGYAEVAKYGALGDEAFFAWLEANHAELFSGGAAREHAVATSCRAKAAIVARDE------------RETGDRALLNLGHTFGHALEAATGFSDRLFHGEGVAIGMVLAAEFSAERGMMPATDAERLAKHLAEVGL 312
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_RHIME (3-dehydroquinate synthase OS=Rhizobium meliloti GN=aroB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 60/244 (24.59%), Postives = 101/244 (41.39%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVP---LRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GEK KS + + +++ I R + D+ GFA RR + +I+IPT+++ +D+ V K +N + KN +G +H P L D L TL + R G+AE+ K F+ L++ + + R+ + AD + + E G ++ GHT+ E A L HG ++I M + + L S ++ RR+ A GL Sbjct: 82 GEKTKSFEHLIPVCEAILGARIERNDAVIALGGGVIGDLTGFAAGIVRRGSRFIQIPTSLLAQVDSSVGGKTGINSAHGKNLIGVFHQPDLVLADTAALDTLSPREFRAGYAEVAKYGLIDKPEFFEWLEKNWQAVFAGGPARIEAIAVSCQAKADVV------------AADERENGRRALLNLGHTFGHALEAATDYDSKRLVHGEGVAIGMVLAHEFSARMNLASPDDARRVEAHLKTVGL 313 The following BLAST results are available for this feature:
BLAST of FC877945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877945 ID=FC877945; Name=FC877945; organism=Citrus clementina; type=EST; length=881bpback to top |