FC877945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_PARDP (3-dehydroquinate synthase OS=Paracoccus denitrificans (strain Pd 1222) GN=aroB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 67/243 (27.57%), Postives = 99/243 (40.74%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVP--LRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE K V+ + I RK+ D+AGFA A RR +++IPTT++ +D+ V K +N KN +GA+H PA L D L TL R G+ E+ K F+ L+ L R ++ A + R+ ET E G ++ GHT+ E A L HG ++I A + L+ GL S E R+ A + G+ Sbjct: 75 GEATKCWAELGRAVEWLLAQRIERKDLVIALGGGVIGDLAGFAAAILRRGVRFVQIPTTLLAQVDSSVGGKTGINSPQGKNLIGAFHQPALVLADIDVLTTLSPRDFRAGYGEVAKYGLLGDEGFFEWLEANAAGLASDPALRQRAVRHSVEMKAGIVQRD--------ET----EQGERALLNLGHTFGHALESATGYSDRLLHGEGVAIGCALAFELSAKMGLCSQEAPSRVAAHLAAMGM 305
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACSK (3-dehydroquinate synthase OS=Bacillus clausii (strain KSM-K16) GN=aroB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 60/222 (27.03%), Postives = 98/222 (44.14%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGE-IKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPV---PLRHGHAISIDMAYSATLA 690 GE++KS + + + + R+ D+AGF Y R +I++PTT++ D+ V KVAVN KN +G +H P L D L TLPE + R+GFAE++K+ A L E L K + + I AD + ++ E G+ + +GHT + H + + + HG A++I M ++ L+ Sbjct: 69 GEQSKSFHVYEQLAAFCLEKQLDRQSVIIAFGGGVVGDLAGFVAGTYMRGVRFIQVPTTLLAH-DSSVGGKVAVNLPAAKNMIGVFHQPEAVLFDTELLATLPEHEWRSGFAEIVKLGFIADASFLAWLRETVPALTSIKADNLQKMVAKAIAIKADIVGKDE------------KEHGIRAHLNFGHTLA--HAIEAELGYGKITHGEAVAIGMRFAFRLS 275
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACA2 (3-dehydroquinate synthase OS=Bacillus amyloliquefaciens (strain FZB42) GN=aroB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 61/215 (28.37%), Postives = 99/215 (46.05%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPV-PLRHGHAISIDMAYS 678 GE+AKSL + I F + R D+AGF A + R ++I++PTT++ D+ V KVAVN+ KN +GA++ P + D L+TLPE ++R+G AE+IK + A F E+L+ G +E+ GI + + E G+ + +GHT E + HG A+++ M ++ Sbjct: 73 GEEAKSLKEYERIQTEAIAFHMDRSSCMIAFGGGVTGDLAGFCAATFMRGIDFIQMPTTLLAH-DSAVGGKVAVNHKLGKNLIGAFYQPKAVIYDTELLKTLPEQELRSGMAEVIKHAFIAD-------HAFLEKLL-----TFDTLQGLTSAELNEMIYKGISIKSAVVREDEKEEGIRAFLNFGHTLGHAVEAEYGYGRITHGDAVALGMQFA 274
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_STRT2 (3-dehydroquinate synthase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=aroB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 57/256 (22.27%), Postives = 113/256 (44.14%), Query Frame = 1 Query: 10 ELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHT-WSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHE 774 E+ + + GE +K+L T + + G+ R + D+AGF + Y R +++++PT++ +D+ + K VN KN +G + P L+D L+TL + ++ G E++K + LLD I + ++ I + + R K+ + E G+ + +GHT + + A + HG A++I M + +A + L+ R++ + + GL +D+E Sbjct: 63 EVVVFDFLEGEASKNLKTVNKAYEFLIKNGMTRSDGIVALGGGVVGDLAGFVASTYMRGIHFVQVPTSLTAQVDSSIGGKTGVNTPFAKNIVGTFAQPDGVLIDPNVLKTLGKRELIEGMGEVVKYGLIDDPELWQLLDN-----IDGSVHSILENSETIIYRSCNVKR-------KIVVEDEFEGGVRMYLNFGHTIGHAVEQTAGYGKVMHGEAVAIGMVQISRVAEKKKLMPQGITRQIAEMCVKFGLPVDYE 306
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_STRT1 (3-dehydroquinate synthase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=aroB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 57/256 (22.27%), Postives = 113/256 (44.14%), Query Frame = 1 Query: 10 ELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHT-WSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHE 774 E+ + + GE +K+L T + + G+ R + D+AGF + Y R +++++PT++ +D+ + K VN KN +G + P L+D L+TL + ++ G E++K + LLD I + ++ I + + R K+ + E G+ + +GHT + + A + HG A++I M + +A + L+ R++ + + GL +D+E Sbjct: 63 EVVVFDFLEGEASKNLKTVNKAYEFLIKNGMTRSDGIVALGGGVVGDLAGFVASTYMRGIHFVQVPTSLTAQVDSSIGGKTGVNTPFAKNIVGTFAQPDGVLIDPNVLKTLGKRELIEGMGEVVKYGLIDDPELWQLLDN-----IDGSVHSILENSETIIYRSCNVKR-------KIVVEDEFEGGVRMYLNFGHTIGHAVEQTAGYGKVMHGEAVAIGMVQISRVAEKKKLMPQGITRQIAEMCVKFGLPVDYE 306
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_RHOPT (3-dehydroquinate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=aroB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 59/243 (24.28%), Postives = 101/243 (41.56%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVP--LRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE +KS + +++ I R + D+AGF+ + RR +++++PT+++ +D+ V K +N KN +G +H P L D L TL Q R G+AE+ K + F L+ L R + A + R+ E G ++ GHT+ E A L HG ++I M +A + +RG++ + +RL + GL Sbjct: 82 GESSKSYAGLEQVCEALIAAKIERNDLVIALGGGVIGDLAGFSASLLRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLIGTFHQPVLVLADTAILDTLSPRQFRAGYAEVAKYGALGDEAFFAWLEANHAELFSGGAAREHAVATSCRAKAAIVARDE------------RETGDRALLNLGHTFGHALEAATGFSDRLFHGEGVAIGMVLAAEFSAERGMMPAADAQRLAKHLADVGL 312
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_RHIL3 (3-dehydroquinate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=aroB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 58/244 (23.77%), Postives = 98/244 (40.16%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVP---LRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GEK KS + D + + + R + D++GFA RR ++++PT+++ +D+ V K +N + KN +G +H P L D L +L E + R G+AE+ K F L+ + + R+ + AD + + E G ++ GHT+ E A L HG +SI M + + L S ++ RR+ GL Sbjct: 82 GEKTKSFEHLITACDKLLEARVERNDYVIALGGGVIGDLSGFAAGIVRRGVRFVQVPTSLLSQVDSSVGGKTGINSRHGKNLIGVFHQPDLVLADTDVLNSLSEREFRAGYAEVAKYGLIDKPDFFAWLEANWKSVFTGGSARIEAIAASCQAKADVV------------VADERENGQRALLNLGHTFGHALEAATAYDSSRLVHGEGVSIGMVLAYEFSARMNLASPDDARRVERHLKEVGL 313
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_RHIEC (3-dehydroquinate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=aroB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 59/245 (24.08%), Postives = 98/245 (40.00%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNY-KNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLR---HGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GEK KS + + D + + + R + D++GFA RR ++++PT+++ +D+ V K +N + KN +G +H P L D L TL E + R G+AE+ K F L+ + R+ + AD + + E G ++ GHT+ E A R HG +SI M + + L S ++ RR+ GL Sbjct: 82 GEKTKSFEHLITVCDKVLEARVERNDCVIALGGGVIGDLSGFAAGIVRRGVRFVQVPTSLLSQVDSSVGGKTGINSPRHGKNLIGVFHQPDLVLADTDVLNTLSEREFRAGYAEVAKYGLIDKPDFFTWLEANWRSVFTGGSARIEAIAASCQAKADVV------------VADERENGQRALLNLGHTFGHALEAATAYDSRRLVHGEGVSIGMVLAHEFSARMNLASPDDARRVERHLREVGL 314
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_LEPIN (3-dehydroquinate synthase OS=Leptospira interrogans GN=aroB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 59/248 (23.79%), Postives = 108/248 (43.55%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWS-PLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHEL 777 GEK+K ++ + + + ++G RK D AGF + Y R +++IPTT++ +D+ V KVAVN KN +G+++ P L TLP+ + + G AE+IK S + E+ E+ +KT + + D I + + + + + E GL +++ GHT + + + HG A++I + + L+ L + + GL +L Sbjct: 73 GEKSKHINRTGEVYNQLIEYGADRKSLILAFGGGVVGDFAGFIASTYLRGIRFVQIPTTLLACVDSSVGGKVAVNADFGKNMIGSFYQPEFVFAPLSVLSTLPDREWKCGQAEIIKHSLLSG-------GEYWEK-VKTHSFKDLNVDSTI---LPYLIAESVRFKANVVSSDEKETGLRKILNLGHTTAHAIESVTKYKKYSHGEAVAIGLVTALLLSEQHSELDPVTTKETIESLKNYGLPFQTKL 309
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_LEPIC (3-dehydroquinate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=aroB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 59/248 (23.79%), Postives = 108/248 (43.55%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWS-PLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHEL 777 GEK+K ++ + + + ++G RK D AGF + Y R +++IPTT++ +D+ V KVAVN KN +G+++ P L TLP+ + + G AE+IK S + E+ E+ +KT + + D I + + + + + E GL +++ GHT + + + HG A++I + + L+ L + + GL +L Sbjct: 73 GEKSKHINRTGEVYNQLIEYGADRKSLILAFGGGVVGDFAGFIASTYLRGIRFVQIPTTLLACVDSSVGGKVAVNADFGKNMIGSFYQPEFVFAPLSVLSTLPDREWKCGQAEIIKHSLLSG-------GEYWEK-VKTHSFKDLNVDSTI---LPYLIAESVRFKANVVSSDEKETGLRKILNLGHTTAHAIESVTKYKKYSHGEAVAIGLVTALLLSEQHSELDPVTTKETIESLKNYGLPFQTKL 309 The following BLAST results are available for this feature:
BLAST of FC877945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877945 ID=FC877945; Name=FC877945; organism=Citrus clementina; type=EST; length=881bpback to top |