FC877945

Overview
NameFC877945
Unique NameFC877945
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length881
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACCQ (3-dehydroquinate synthase OS=Bacillus cereus (strain Q1) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERL 444
            GEK KS + F     S  +  + R             D+AGF  A++ R   ++++PTT++   D+ V  KVA+N+   KN +GA+H P   +    FL++LPE + R+G+AE+IK +    +  +  L E  + L
Sbjct:   73 GEKEKSFENFYAAHTSALENKLDRNSLIIALGGGMIGDLAGFVAASFMRGIRFVQVPTTLLAH-DSAVGGKVAINHPLGKNMIGAFHQPEAVVYHTPFLQSLPEKEWRSGYAEVIKHALIGDVKLYHWLKEEVQTL 207          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACC7 (3-dehydroquinate synthase OS=Bacillus cereus (strain AH187) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERL 444
            GEK KS + F     S  +  + R             D+AGF  A++ R   ++++PTT++   D+ V  KVA+N+   KN +GA+H P   +    FL++LPE + R+G+AE+IK +    +  +  L E  + L
Sbjct:   73 GEKEKSFENFYAAHTSALENKLDRNSLIIALGGGMIGDLAGFVAASFMRGIRFVQVPTTLLAH-DSAVGGKVAINHPLGKNMIGAFHQPEAVVYHTPFLQSLPEKEWRSGYAEVIKHALIGDVKLYHWLKEEVQTL 207          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACC4 (3-dehydroquinate synthase OS=Bacillus cereus (strain B4264) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERL 444
            GEK KS + F     S  +  + R             D+AGF  A++ R   ++++PTT++   D+ V  KVA+N+   KN +GA+H P   +    FL++LPE + R+G+AE+IK +    +  +  L E  + L
Sbjct:   73 GEKEKSFENFYAAHTSALENKLDRNSLILALGGGMIGDLAGFVAASFMRGIRFVQVPTTLLAH-DSAVGGKVAINHPLGKNMIGAFHQPEAVVYHTPFLQSLPEKEWRSGYAEVIKHALIGDVELYHWLKEEVQTL 207          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACC3 (3-dehydroquinate synthase OS=Bacillus cereus (strain 03BB102) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERL 444
            GEK KS + F     S  +  + R             D+AGF  A++ R   ++++PTT++   D+ V  KVA+N+   KN +GA+H P   +    FL++LPE + R+G+AE+IK +    +  +  L E  + L
Sbjct:   73 GEKEKSFENFYAAHTSALENKLDRNSLIVALGGGMIGDLAGFVAASFMRGIRFVQVPTTLLAH-DSAVGGKVAINHPLGKNMIGAFHQPEAVVYHTPFLQSLPEKEWRSGYAEVIKHALIGDVKLYHWLKEEVQTL 207          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACC0 (3-dehydroquinate synthase OS=Bacillus cereus (strain AH820) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERL 444
            GEK KS + F     S  +  + R             D+AGF  A++ R   ++++PTT++   D+ V  KVA+N+   KN +GA+H P   +    FL++LPE + R+G+AE+IK +    +  +  L E  + L
Sbjct:   73 GEKEKSFENFYAAHTSALENKLDRNSLIVALGGGMIGDLAGFVAASFMRGIRFVQVPTTLLAH-DSAVGGKVAINHPLGKNMIGAFHQPEAVVYHTPFLQSLPEKEWRSGYAEVIKHALIGDVKLYHWLKEEVQTL 207          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACAN (3-dehydroquinate synthase OS=Bacillus anthracis GN=aroB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERL 444
            GEK KS + F     S  +  + R             D+AGF  A++ R   ++++PTT++   D+ V  KVA+N+   KN +GA+H P   +    FL++LPE + R+G+AE+IK +    +  +  L E  + L
Sbjct:   73 GEKEKSFENFYAAHTSALENKLDRNSLIIALGGGMIGDLAGFVAASFMRGIRFVQVPTTLLAH-DSAVGGKVAINHPLGKNMIGAFHQPEAVVYHTPFLQSLPEKEWRSGYAEVIKHALIGDVKLYHWLKEEVQTL 207          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACAH (3-dehydroquinate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERL 444
            GEK KS + F     S  +  + R             D+AGF  A++ R   ++++PTT++   D+ V  KVA+N+   KN +GA+H P   +    FL++LPE + R+G+AE+IK +    +  +  L E  + L
Sbjct:   73 GEKEKSFENFYAAHTSALENKLDRNSLIVALGGGMIGDLAGFVAASFMRGIRFVQVPTTLLAH-DSAVGGKVAINHPLGKNMIGAFHQPEAVVYHTPFLQSLPEKEWRSGYAEVIKHALIGDVKLYHWLKEEVQTL 207          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACAC (3-dehydroquinate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERL 444
            GEK KS + F     S  +  + R             D+AGF  A++ R   ++++PTT++   D+ V  KVA+N+   KN +GA+H P   +    FL++LPE + R+G+AE+IK +    +  +  L E  + L
Sbjct:   73 GEKEKSFENFYAAHTSALENKLDRNSLIIALGGGMIGDLAGFVAASFMRGIRFVQVPTTLLAH-DSAVGGKVAINHPLGKNMIGAFHQPEAVVYHTPFLQSLPEKEWRSGYAEVIKHALIGDVKLYHWLKEEVQTL 207          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BACAA (3-dehydroquinate synthase OS=Bacillus anthracis (strain A0248) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERL 444
            GEK KS + F     S  +  + R             D+AGF  A++ R   ++++PTT++   D+ V  KVA+N+   KN +GA+H P   +    FL++LPE + R+G+AE+IK +    +  +  L E  + L
Sbjct:   73 GEKEKSFENFYAAHTSALENKLDRNSLIIALGGGMIGDLAGFVAASFMRGIRFVQVPTTLLAH-DSAVGGKVAINHPLGKNMIGAFHQPEAVVYHTPFLQSLPEKEWRSGYAEVIKHALIGDVKLYHWLKEEVQTL 207          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_SHESW (3-dehydroquinate synthase OS=Shewanella sp. (strain W3-18-1) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.995e-12
Identity = 65/227 (28.63%), Postives = 104/227 (45.81%), Query Frame = 1
Query:  148 DVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLD---EFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPL---RHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL------SMDHELFYEEI 792
            D+ GFA A Y+R  ++I+IPTT++  +D+ V  K AVN+   KN +GA++ P   L+D   L TLP  +   G AE+IK         F  L+   +  +RL             EIK  AD ++++        ET    E G+  ++  GHT+   H +   +      HG A++     +A  A   GL+ +    R++ L     L      SMD + F + +
Sbjct:  109 DMTGFAAACYQRGIDFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPQLVLIDTQCLHTLPAREFAAGMAEVIKYGIMWDGKFFQWLENNVQALKRLETEALVYAISRCCEIK--ADVVSQD--------ET----EQGVRALLNLGHTFG--HAIEAEMGYGNWLHGEAVAAGTVLAAQTARSLGLIDESIVCRIVQLLQAFDLPVSAPESMDFDSFIQHM 319          
The following BLAST results are available for this feature:
BLAST of FC877945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AROB_BACCQ3.824e-1231.623-dehydroquinate synthase OS=Bacillus cereus (stra... [more]
AROB_BACC73.824e-1231.623-dehydroquinate synthase OS=Bacillus cereus (stra... [more]
AROB_BACC43.824e-1231.623-dehydroquinate synthase OS=Bacillus cereus (stra... [more]
AROB_BACC33.824e-1231.623-dehydroquinate synthase OS=Bacillus cereus (stra... [more]
AROB_BACC03.824e-1231.623-dehydroquinate synthase OS=Bacillus cereus (stra... [more]
AROB_BACAN3.824e-1231.623-dehydroquinate synthase OS=Bacillus anthracis GN... [more]
AROB_BACAH3.824e-1231.623-dehydroquinate synthase OS=Bacillus thuringiensi... [more]
AROB_BACAC3.824e-1231.623-dehydroquinate synthase OS=Bacillus anthracis (s... [more]
AROB_BACAA3.824e-1231.623-dehydroquinate synthase OS=Bacillus anthracis (s... [more]
AROB_SHESW4.995e-1228.633-dehydroquinate synthase OS=Shewanella sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA78AH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA78AH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877945 ID=FC877945; Name=FC877945; organism=Citrus clementina; type=EST; length=881bp
CACCGTCTTGAATTGAAGATTCACCAGACAATGATCGGAGAGAAGGCCAA
GTCCTTGGATACGTTTACCAACATTGTGGACTCCATGACTGATTTTGGAA
TCATTCGGAAAGAGCCTGTTTTGGTTGTGGGCGGAGGACTAGTCACCGAC
GTTGCAGGATTTGCCTGCGCCGCCTATCGCCGCAACACCAATTACATCCG
TATCCCCACAACCGTTATTGGCCTGATCGACGCCCGTGTCAGTATCAAAG
TCGCTGTCAACTACGGCAACTACAAGAACCGACTCGGTGCCTACCATGCA
CCCGCGCACACCCTTCTTGATTTTGGTTTCTTGAGAACCTTGCCCGAGGC
TCAAGTTCGCAACGGGTTTGCCGAGCTCATCAAGATTTCGAGCTGTGCTC
ACTTGCCGACATTTGACTTGTTGGATGAGTTCTGTGAGCGGCTCATCAAG
ACCAAATTCGGGCGTGTCTCCGACCACGATGGAGAGATCAAGAAAGCTGC
CGACGAGATCAACCGGAACGGGATCTTTGAGATGTTGAAGCTCGAAACGC
CGAATCTGCATGAGATCGGCCTGGACCGAGTGATTGCGTATGGCCACACT
TGGTCGCCCCTTCACGAGCTCGCGCCCCCAGTTCCACTTCGCCACGGCCA
TGCCATTTCAATAGATATGGCTTATTCTGCCACTTTGGCGAATGACCGTG
GCCTTCTCAGTGATGAAGAGCACCGGAGATTGTTGGCTCTCTTTTCTCGT
GCAGGCCTCTCCATGGATCACGAACTTTTCTACGAAGAAATTCTGGATAA
AGCCACACAGTCATTTTGAGACCCGAGACGGGCTCTTGCGTGCAGCTGTG
CCAAGTCCACTAGGCAGCTGCAAGTTCTTGA
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