FC877945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_THENV (3-dehydroquinate synthase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=aroB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19 Identity = 69/265 (26.04%), Postives = 118/265 (44.53%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHELFYEEILDKATQSF*DPRR 831 GE+ KSL+ T + + + G R D+A FA Y R + IPTT++ ++DA + K AV++G KN +G ++ PA L D +L TLPE R+ FAE++K + + E + L+ DG + A + R+ + +E E G+ +V+ GHT H + + L HG A+++ M L+++ G L + + S GL + +++ + A D +R Sbjct: 53 GEEVKSLEVLTKVYGFLKEVGADRSTTLVAVGGGALLDLATFAAGTYMRGIRLVHIPTTLLAMVDAALGGKGAVDWGPVKNLIGVFYQPAAILCDLSWLGTLPERVYRSAFAEVVKYGLALDGDFYSWVRENAKALLA--------RDGGALEYA--VYRSLQLKAGVVEVDEFEERGVRQVLNVGHTVG--HAVERVLGLLHGEAVAVGMVAELRLSSELGYLRESHVAEAAEVLSSLGLPTSVKATEQQLAEAAALVKFDKKR 305
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_TERTT (3-dehydroquinate synthase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=aroB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19 Identity = 69/242 (28.51%), Postives = 112/242 (46.28%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPV-PLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE+ K+L I D++ RK D+ GFA A Y+R N+I++PTT++ +D+ V K VN+ KN +GA++ P ++D L TLPE ++ G AE+IK A +P F+ L+ T + + E A E++ ++ + E G+ ++ GHT+ E HG A+ M + L++ G L +E R +AL + AGL Sbjct: 71 GEQHKTLGVLNTIFDTLIAQRHNRKTTLIALGGGVVGDMTGFAAACYQRGVNFIQVPTTLLSQVDSSVGGKTGVNHPQGKNMIGAFYQPQAVVIDTQVLDTLPERELSAGLAEVIKYGIIADIPFFEWLE--------TNMPALLARESEALAYAIEVS---CAIKARVVAQDEKESGIRAILNLGHTFGHAIESHQGYGDWVHGEAVGAGMVLACELSSRLGWLDAKECDRAVALIAAAGL 301
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_SYNPX (3-dehydroquinate synthase OS=Synechococcus sp. (strain WH8102) GN=aroB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19 Identity = 73/242 (30.17%), Postives = 106/242 (43.80%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHE-LAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE+ K+ T I DS + + R D+ GFA A + R I++PTT++ ++DA + K VN+ KN +GA+H P+ L+D L TLPE + R G AE+IK F L+E E G + I ++ + E GL V+ YGHT+ + E L HG A++I M LA +RG + +E R L R GL Sbjct: 81 GEERKTPATVAAIHDSAFEQRLERSSLMLALGGGVVGDMTGFAAATWLRGIQVIQVPTTLLAMVDAAIGGKTGVNHPGGKNLIGAFHQPSLVLIDPETLNTLPEREFRAGMAEVIKYGILGDPALFQCLEEGPEPNSAAGLG---------NSRLETILERSAAAKARVVAADEREGGLRAVLNYGHTFGHVVETLCGYGTWLHGEAVAIGMVAVGQLAVNRGSWTADEAGRQTQLIQRCGL 313
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_SULAC (3-dehydroquinate synthase OS=Sulfolobus acidocaldarius GN=aroB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19 Identity = 64/223 (28.70%), Postives = 103/223 (46.19%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEI-GLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRG 702 GE+AK + ++ + D G R + TD GF + Y R N I +PTT++G++DA + K VN+G KN +G ++ P + D FL +LP +VR G AE+IK +LD+ + V D E + + + + I + L + + E G+ V+ +GHT E + HG+AIS+ M A +A + G Sbjct: 62 GEEAKDIQYSLELLKVLFDGGFDRGDYVIAIGGGSVTDTVGFIASTYMRGLNLINVPTTLLGMVDAGIGGKNGVNFGRIKNIIGTFYQPRAIIADLRFLISLPSEEVRKGLAEVIKYGL--------VLDKELYDFLALNKNSVLSKDPE---SLEYVVQRSIQDKLSVVKEDERETKGVRIVLNFGHTIGHAIEAGSGFSIPHGYAISVGMVCEAKIAEEMG 273
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_CAMJJ (3-dehydroquinate synthase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=aroB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.218e-19 Identity = 73/275 (26.55%), Postives = 133/275 (48.36%), Query Frame = 1 Query: 10 ELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPL-RHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHEL-----FYEE-ILDKATQS 813 E+ I GE+ K+L T I++ M + + RK +D+ GFA + Y+R ++I IPTT++ +DA V K VN KN +G ++ P + FL+TL ++ G AE IK+++ D + +F E++ + F + + + +I I ++ + E GL ++ YGHT++ + E L HG A++I M + LA + GLL + +++ + + GL + +++ FYE +DK + + Sbjct: 52 EIFIATVKDGEEYKNLSTMEEILNQMFNSKLDRKSVLISFGGGVISDMGGFAASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNNFGKNLIGTFYQPKAVYCESSFLKTLSFRELAAGMAEFIKMAAMFD----DSILDFIEKIDEKSFLNATCEN----EIFTQIIARSIELKSRVVEQDEKESGLRMLLNYGHTFAHVIENFTDYKLYLHGEAVAIGMVMANQLALNLGLLDKMQSQKIKDILLKFGLPISYKINNVDEFYEAFFMDKKSSN 318
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_SACEN (3-dehydroquinate synthase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=aroB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 1 Query: 145 TDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDE---EHRRLLAL 741 TDVAGF + R + +PTT++G++DA + K +N KN +G +H P+ L+D L LP ++ G AE++K A D RL++ D GE+ E+ R I + +L E L V+ YGHT + E RHG A+S+ + ++A LA G L DE H+++L L Sbjct: 107 TDVAGFVAGTWMRGVRVVHVPTTLLGMVDAAIGGKAGINTDAGKNLVGVFHEPSAVLVDLATLEGLPRNELVAGMAEVVKAGFIA--------DPEILRLVEADPQGALDPAGEV---IAELVRRAIQVKADVVASDLRESHLREVLNYGHTLAHAIERRERYRWRHGAAVSVGLVFAAELARLAGRLDDETADRHKKVLDL 297
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_PASMU (3-dehydroquinate synthase OS=Pasteurella multocida GN=aroB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 73/248 (29.44%), Postives = 118/248 (47.58%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLI-------KTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE+ K+LD+ I ++ R DVAG+A A+Y+R +I+IPTT++ +D+ V K AVN+ KN +GA++ P ++D L +LP+ ++ G AE+IK + LP F L++ + L+ +T R ++ A DE + G +L L H I + + YGH W HG A+++ M +A L+ G L+ + RL L +RA L Sbjct: 71 GEQYKTLDSLNLIFTALLQGNHGRDTTIIALGGGVIGDVAGYAAASYQRGVRFIQIPTTLLAQVDSSVGGKTAVNHALGKNMIGAFYQPCTVIIDTLTLNSLPKREINAGLAEVIKYGAILDLPFFTWLEQNIDSLVARDPDNLQTCIARCCQIKADV-VARDETEK-GDRALLNLGHTFGHAI--ETHLGYGH-W------------LHGEAVAVGMLMAAVLSEKLGNLTKTDVARLERLLARANL 301
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_GEOBB (3-dehydroquinate synthase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=aroB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 67/242 (27.69%), Postives = 108/242 (44.63%), Query Frame = 1 Query: 37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWS-PLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759 GE K+ T I D + D + R D+AGFA A+Y R +++IPTT++ +D+ V K +N+ KN +GA++ P L+D L TLP+ + +G E++K + FD L++ + L+ K+A + K+ + E G+ V+ YGHT + L HG A++I M +A L+ G S + R+ AL GL Sbjct: 75 GEGYKNSATLNLIYDGLVDASLDRGSFILALGGGVIGDMAGFAAASYLRGIPFVQIPTTLLSQVDSSVGGKTGINHPRGKNLIGAFYQPKAVLIDVATLDTLPKREFLSGLGEIVKYGAVLDGGFFDFLEKNAKLLL-----------ARDKEALIQAVSRSCAIKAKVVAEDEREGGVRAVLNYGHTLGHAVETLTGYTRYLHGEAVAIGMVQAARLSQHYGFCSQADRERIEALVVALGL 305
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_CAMJ8 (3-dehydroquinate synthase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=aroB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 72/275 (26.18%), Postives = 132/275 (48.00%), Query Frame = 1 Query: 10 ELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPL-RHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHEL-----FYEE-ILDKATQS 813 E+ I GE+ K+L T I++ M + + RK +D+ GFA + Y+R ++I IPTT++ +DA V K VN KN +G ++ P + FL+TL ++ G AE IK+++ D + +F E++ + F + + + +I I ++ + E GL ++ YGHT++ + E L HG A++I M + LA + G L + +++ + + GL + +++ FYE +DK + + Sbjct: 52 EIFIAAVKDGEEYKNLSTMEEILNQMFNSKLDRKSVLISFGGGVISDMGGFAASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNNFGKNLIGTFYQPKAVYCESSFLKTLSSRELAAGMAEFIKMAAMFD----DSILDFIEKIDEKSFLNATCEN----EIFTQIIARSIELKSRVVEQDEKESGLRMLLNYGHTFAHVIENFTDYKLYLHGEAVAIGMVMANQLALNLGFLDKMQSQKIKDILLKFGLPISYKINNVDEFYEAFFMDKKSSN 318
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_SYNP2 (3-dehydroquinate synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=aroB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19 Identity = 76/279 (27.24%), Postives = 119/279 (42.65%), Query Frame = 1 Query: 22 HQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELI------------KISSCAHLPTF-----DLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWS-PLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMD--HELFYEEILD 798 H GE+ K+L + I D+ + R D+ GFA A + R N++++PTT++ ++DA V K VN+ KN +GA++ P L+D L+TLP + R G AE+I K+ + + ++ DLLD ER + K VS + E GL ++ YGHT + L HG ++I MA + +A L + E +R AL +AGL + + L E IL+ Sbjct: 69 HLIPAGEQYKNLASIEKIYDTAFKNRLERSSTLLALGGGVIGDMTGFAAATWLRGINFVQVPTTLLAMVDASVGGKTGVNHPQGKNLIGAFYQPKFVLIDPTVLKTLPVREFRAGMAEVIKYGVIWDADLFTKLEAAEQIDSYATIDPDLLDLILERSCRAKAEVVSQDE--------------------------RESGLRAILNYGHTLGHAVESLTHYETFVHGEGVAIGMALAGAIATRMNLWTTAETQRQDALIKKAGLPTECPNNLAIEAILE 321 The following BLAST results are available for this feature:
BLAST of FC877945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877945 ID=FC877945; Name=FC877945; organism=Citrus clementina; type=EST; length=881bpback to top |