FC877945

Overview
NameFC877945
Unique NameFC877945
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length881
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_STRPZ (3-dehydroquinate synthase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=aroB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 69/245 (28.16%), Postives = 107/245 (43.67%), Query Frame = 1
Query:   19 IHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWS-PLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSR 750
            +H    G + KSL+  + I D +      +K+           D+ GF  A Y R   YI+IPTT++  +D+ +  KV V++ +  N +G+ + P   ++   FL TLP+ +   G +E++KI      P F  L +F +   K    R+       KK   E +                E GL   + +GHT    +  L       HG AI+I M   A LA  +GLL  E+   LL +F R
Sbjct:   65 VHVCPPGGQTKSLERVSAIYDQLIAENFSKKDMIVTIGGGVVGDLGGFVAATYSRGIPYIQIPTTLLSQVDSSIGGKVGVHFKSLTNMIGSIYPPEAIIISTTFLETLPQREFSCGISEMLKIGFIHDRPLFQQLRDFQKETDKQGLERLIYQSISNKKQIVEQDE--------------FENGLRMSLNFGHTLGHAIESLCHHDFYHHGEAIAIGMVVDAKLAVSKGLLPKEDLDSLLQVFER 295          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_RHOE4 (3-dehydroquinate synthase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=aroB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 66/258 (25.58%), Postives = 108/258 (41.86%), Query Frame = 1
Query:    1 HRLELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMDHE 774
            HR+E+        E  K L       D +   G+ R +          TD+ GF  A + R    + +PTT++ ++DA V  K  +N    KN +G++H P    +D   L T+P  ++  G AE+IK    A     DL++   +  +        D  G +     E+ R  +    K+   +L E  L  ++ YGHT     E       RHG A+S+ + ++A L    G L D    R  ++    GL   ++
Sbjct:   64 HRIEIPD-----AEDGKDLAVAGFCWDVLGRIGLTRSDAIMSLGGGAATDLTGFVAATWMRGVKVVHVPTTLLAMVDAAVGGKTGINTEAGKNLVGSFHEPGAVFIDLATLETVPHNEIVAGMAEVIKTGFIADPVILDLIEADPKAAL--------DPSGTV---LPELIRRSVEVKAKVVAADLRESDLREILNYGHTLGHAIERRERYKWRHGAAVSVGLVFAAELGRLAGRLDDATADRHKSILDLVGLPTSYD 305          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_RALSO (3-dehydroquinate synthase OS=Ralstonia solanacearum GN=aroB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 68/242 (28.10%), Postives = 108/242 (44.63%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPV-PLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759
            GE  K+ +T   I D++   G  RK            D+ GFA A+Y R   +I++PTT++  +D+ V  K  +N+   KN +GA+H P   L D   LRTLP  ++  G AE+IK  + A    F          I+     ++  D ++   A    R  +     +   +  E GL  ++ +GHT+    E         HG A+   MA +A L++  G +  +   R+ AL   A L
Sbjct:   72 GESFKTWETLNRIFDALLASGADRKTTLVALGGGVIGDMTGFAAASYMRGVPFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFHQPQAVLADIDTLRTLPPRELAAGMAEVIKHGAIADADYF--------AWIERHIAGLNACDADLMAGA---VRGSVQIKAAVVAQDERESGLRAILNFGHTFGHAIEAGLGYGEWLHGEAVGCGMAMAADLSHRLGFIDIDTRNRVTALTRAANL 302          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_ECO81 (3-dehydroquinate synthase OS=Escherichia coli O81 (strain ED1a) GN=aroB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 70/254 (27.56%), Postives = 118/254 (46.46%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTK-------FGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPL---RHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGLSMD 768
            GE+ KSL     +  ++      R             D+ GFA A+Y+R   +I++PTT++  +D+ V  K AVN+   KN +GA++ PA  ++D   L+TLP  ++ +G AE+IK         F+ L+E  + L++           R  +   E+  AADE                  E GL  ++  GHT+   H +   +      HG A+++ M  +A  +   G  S  E +R++ L +RAGL ++
Sbjct:   72 GEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYCIRRCCELKAEV-VAADE-----------------RETGLRALLNLGHTFG--HAIEAEMGYGNWLHGEAVAVGMVMAARTSERLGQFSSAETQRIITLLTRAGLPVN 305          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_CYAP8 (3-dehydroquinate synthase OS=Cyanothece sp. (strain PCC 8801) GN=aroB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 66/255 (25.88%), Postives = 115/255 (45.10%), Query Frame = 1
Query:   10 ELKIHQTMIGEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLE----TPNLHEIGLDRVIAYGHT-WSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759
            E+  H    GE  K+LD+   + D+  +  + R             D+ GFA A + R  N++++PT+++ ++DA +  K  VN+   KN +GA++ P    +D   L+TLP  + R G AE+IK         F+ L++           +  DH   +    DE+ +  I    + +    + +  E GL  ++ YGHT    +  L     + HG A+++ M  +  +A    L + EE  R   L  + GL
Sbjct:   65 EVFTHLIPAGEAYKTLDSIAQVYDTALEHRLERSSTMIALGGGVIGDMTGFAAATWLRGINFVQVPTSLLAMVDASIGGKTGVNHPQGKNLIGAFYQPRLVFIDPSVLKTLPVREFRAGMAEVIKYGIIWDKALFEQLEQ----------AKTLDH---LNSLNDELLQTIITRSCQAKVDVVSQDEKESGLRAILNYGHTIGHAIESLTGYETINHGEAVAMGMVAAGKIAIKLSLWTQEETIRQDQLIDKVGL 306          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_CAUSK (3-dehydroquinate synthase OS=Caulobacter sp. (strain K31) GN=aroB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 64/243 (26.34%), Postives = 111/243 (45.68%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVSDHDGEIKKAADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPL--HELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759
            GE+ KS +   ++ D +   G+ R +           D+ GFA A Y+R  ++I+IPTT++  +D+ V  K A++    KN +GA+H P   L D   L TLP  ++  G+AE+IK         F+ L+     +++       D    +K     +         ++   +  E+G   ++  GHT+      E+     L+HG A+ + MA +   +  +GL S ++  R  A    AGL
Sbjct:   74 GEETKSFEGLADLSDRLLALGLERGDMVIAFGGGVVGDLTGFAAAIYKRGIDFIQIPTTLLAQVDSSVGGKTAIDTPRGKNLIGAFHQPRLVLADLDILATLPARELACGYAEVIKYGLLGDFAFFEWLEANVHAVLE------RDTAALVKAVGRSVEMKA-----QIVAEDEREVGRRALLNLGHTFGHAVEGEMGFGDALKHGEAVGLGMAQAFRFSVRQGLCSAQDAARAEAAIKAAGL 305          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_BURM1 (3-dehydroquinate synthase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=aroB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 73/248 (29.44%), Postives = 108/248 (43.55%), Query Frame = 1
Query:   37 GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIK---TKFGRVSDHDGEIKK---AADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPV-PLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759
            GE  K+ +T   I D +      RK            D+ GFA A Y R   +I++PTT++  +D+ V  K  +N+   KN +GA++ P   + D G L TLPE ++  G AE+IK  + A    FD ++   + L +              EIK    AADE                  E GL  ++ +GHT+    E         HG A+   M  +A L+   GLL D   +RL A+ + A L
Sbjct:   72 GEAYKNWETLNLIFDGLLGERADRKTTLVALGGGVIGDMTGFAAACYMRGVPFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQAVIADIGALTTLPERELAAGIAEVIKTGAIADAAFFDWIEANVDALNRRDPAALAHAVKRSCEIKASVVAADE-----------------REGGLRAILNFGHTFGHAIEAGLGYGEWLHGEAVGCGMVMAADLSVRLGLLDDASRQRLDAVIAAAHL 302          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_YERPY (3-dehydroquinate synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=aroB PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19
Identity = 73/257 (28.40%), Postives = 118/257 (45.91%), Query Frame = 1
Query:   13 LKIHQTMI--GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVS---DHDGEIKK---AADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759
            +K+ Q ++  GE+ KSL     +  ++ +    R             D+ GFA A Y+R   +I++PTT++  +D+ V  K AVN+   KN +GA++ PA  ++D   L+TLP  ++ +G AE+IK         FD L+   + L+      ++       E+K    AADE   +G   +L L     H I  +  + YG  W             HG A++  M  +A  +   G LS  +  R+  L  RAGL
Sbjct:   62 IKVDQVILPDGEQYKSLSVMEQVFSALLEKPHGRDTTLVALGGGVVGDLTGFAAACYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLNCLKTLPPRELASGLAEVIKYGIILDAAFFDWLENNIDALLALDMSALAYCIRRCCELKADVVAADEREESGARALLNLGHTYGHAI--EAEMGYG-VW------------LHGEAVAAGMVMAAQTSRRLGQLSVSDVERIKKLLLRAGL 303          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_YERPS (3-dehydroquinate synthase OS=Yersinia pseudotuberculosis GN=aroB PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19
Identity = 73/257 (28.40%), Postives = 118/257 (45.91%), Query Frame = 1
Query:   13 LKIHQTMI--GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVS---DHDGEIKK---AADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759
            +K+ Q ++  GE+ KSL     +  ++ +    R             D+ GFA A Y+R   +I++PTT++  +D+ V  K AVN+   KN +GA++ PA  ++D   L+TLP  ++ +G AE+IK         FD L+   + L+      ++       E+K    AADE   +G   +L L     H I  +  + YG  W             HG A++  M  +A  +   G LS  +  R+  L  RAGL
Sbjct:   62 IKVDQVILPDGEQYKSLSVMEQVFSALLEKPHGRDTTLVALGGGVVGDLTGFAAACYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLNCLKTLPPRELASGLAEVIKYGIILDAAFFDWLENNIDALLALDMSALAYCIRRCCELKADVVAADEREESGARALLNLGHTYGHAI--EAEMGYG-VW------------LHGEAVAAGMVMAAQTSRRLGQLSVSDVERIKKLLLRAGL 303          
BLAST of FC877945 vs. ExPASy Swiss-Prot
Match: AROB_YERPP (3-dehydroquinate synthase OS=Yersinia pestis (strain Pestoides F) GN=aroB PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19
Identity = 73/257 (28.40%), Postives = 118/257 (45.91%), Query Frame = 1
Query:   13 LKIHQTMI--GEKAKSLDTFTNIVDSMTDFGIIRKEPXXXXXXXXXTDVAGFACAAYRRNTNYIRIPTTVIGLIDARVSIKVAVNYGNYKNRLGAYHAPAHTLLDFGFLRTLPEAQVRNGFAELIKISSCAHLPTFDLLDEFCERLIKTKFGRVS---DHDGEIKK---AADEINRNGIFEMLKLETPNLHEIGLDRVIAYGHTWSPLHELAPPVPLRHGHAISIDMAYSATLANDRGLLSDEEHRRLLALFSRAGL 759
            +K+ Q ++  GE+ KSL     +  ++ +    R             D+ GFA A Y+R   +I++PTT++  +D+ V  K AVN+   KN +GA++ PA  ++D   L+TLP  ++ +G AE+IK         FD L+   + L+      ++       E+K    AADE   +G   +L L     H I  +  + YG  W             HG A++  M  +A  +   G LS  +  R+  L  RAGL
Sbjct:   62 IKVDQVILPDGEQYKSLSVMEQVFSALLEKPHGRDTTLVALGGGVVGDLTGFAAACYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLNCLKTLPPRELASGLAEVIKYGIILDAAFFDWLENNIDALLALDMSALAYCIRRCCELKADVVAADEREESGARALLNLGHTYGHAI--EAEMGYG-VW------------LHGEAVAAGMVMAAQTSRRLGQLSVSDVERIKKLLLRAGL 303          
The following BLAST results are available for this feature:
BLAST of FC877945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AROB_STRPZ7.195e-1928.163-dehydroquinate synthase OS=Streptococcus pyogene... [more]
AROB_RHOE47.195e-1925.583-dehydroquinate synthase OS=Rhodococcus erythropo... [more]
AROB_RALSO7.195e-1928.103-dehydroquinate synthase OS=Ralstonia solanacearu... [more]
AROB_ECO817.195e-1927.563-dehydroquinate synthase OS=Escherichia coli O81 ... [more]
AROB_CYAP87.195e-1925.883-dehydroquinate synthase OS=Cyanothece sp. (strai... [more]
AROB_CAUSK7.195e-1926.343-dehydroquinate synthase OS=Caulobacter sp. (stra... [more]
AROB_BURM17.195e-1929.443-dehydroquinate synthase OS=Burkholderia multivor... [more]
AROB_YERPY9.397e-1928.403-dehydroquinate synthase OS=Yersinia pseudotuberc... [more]
AROB_YERPS9.397e-1928.403-dehydroquinate synthase OS=Yersinia pseudotuberc... [more]
AROB_YERPP9.397e-1928.403-dehydroquinate synthase OS=Yersinia pestis (stra... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA78AH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA78AH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877945 ID=FC877945; Name=FC877945; organism=Citrus clementina; type=EST; length=881bp
CACCGTCTTGAATTGAAGATTCACCAGACAATGATCGGAGAGAAGGCCAA
GTCCTTGGATACGTTTACCAACATTGTGGACTCCATGACTGATTTTGGAA
TCATTCGGAAAGAGCCTGTTTTGGTTGTGGGCGGAGGACTAGTCACCGAC
GTTGCAGGATTTGCCTGCGCCGCCTATCGCCGCAACACCAATTACATCCG
TATCCCCACAACCGTTATTGGCCTGATCGACGCCCGTGTCAGTATCAAAG
TCGCTGTCAACTACGGCAACTACAAGAACCGACTCGGTGCCTACCATGCA
CCCGCGCACACCCTTCTTGATTTTGGTTTCTTGAGAACCTTGCCCGAGGC
TCAAGTTCGCAACGGGTTTGCCGAGCTCATCAAGATTTCGAGCTGTGCTC
ACTTGCCGACATTTGACTTGTTGGATGAGTTCTGTGAGCGGCTCATCAAG
ACCAAATTCGGGCGTGTCTCCGACCACGATGGAGAGATCAAGAAAGCTGC
CGACGAGATCAACCGGAACGGGATCTTTGAGATGTTGAAGCTCGAAACGC
CGAATCTGCATGAGATCGGCCTGGACCGAGTGATTGCGTATGGCCACACT
TGGTCGCCCCTTCACGAGCTCGCGCCCCCAGTTCCACTTCGCCACGGCCA
TGCCATTTCAATAGATATGGCTTATTCTGCCACTTTGGCGAATGACCGTG
GCCTTCTCAGTGATGAAGAGCACCGGAGATTGTTGGCTCTCTTTTCTCGT
GCAGGCCTCTCCATGGATCACGAACTTTTCTACGAAGAAATTCTGGATAA
AGCCACACAGTCATTTTGAGACCCGAGACGGGCTCTTGCGTGCAGCTGTG
CCAAGTCCACTAGGCAGCTGCAAGTTCTTGA
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