FC877968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: TTC28_HUMAN (Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 127 DFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGL 408 DF A ++EA+A+DP N +LYSNRS AY ++ +DKAL+DA K L W K + R+G AL +G +A+ AF L+ +P + Q G+ Sbjct: 73 DFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGM 166
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: SGTA_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.921e-13 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 82 ADALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLE 411 A+ LK EGN+ ++F A + +AI L+P+N V + NR+ AY+ L N+ A++D + + ++K +GR G AL + EAV ++ AL L+P N K+ L+ Sbjct: 91 AERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDTYKSNLK 200
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: SGTA_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.921e-13 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 82 ADALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLE 411 A+ LK EGN+ ++F A + +AI L+P+N V + NR+ AY+ L N+ A++D + + ++K +GR G AL + EAV ++ AL L+P N K+ L+ Sbjct: 92 AERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDTYKSNLK 201
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.490e-12 Identity = 52/193 (26.94%), Postives = 89/193 (46.11%), Query Frame = 1 Query: 82 ADALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLESVRRAIDAEA--KAXXXXXXXXXXXXNMFNDPKMIEKLASNPKTAGLLGDSAFMAKIQQLKNNPNAMGEMMGDPRMLQVMGVL 654 A+ LK + N F AKD+ A + +S+AI L+PSN + Y NRS AY + + AL DA + EL + KG+ R+ A+ +G A+ +E + ++P + AK + + + +A +A ++ + IE S PK +FM ++ Q + + ++QV VL Sbjct: 28 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVL 220
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.542e-12 Identity = 39/120 (32.50%), Postives = 65/120 (54.17%), Query Frame = 1 Query: 82 ADALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLESVRRAIDAEA 441 A+ LK + N F AKD+ A + +S+AI L+PSN + Y NRS AY + + AL DA + EL + KG+ R+ A+ +G A+ +E + ++P + AK + + + +A Sbjct: 28 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPNDKDAKMKYQECSKIVKQKA 147
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: LONF3_MOUSE (LON peptidase N-terminal domain and RING finger protein 3 OS=Mus musculus GN=Lonrf3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12 Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 82 ADALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKA 402 A L+ EGN+LF A K++EA+ L P++H+LYSNRS Y +L++ + AL DA +L+ K RK AL +G + EA+ F + +SL+ N A++ Sbjct: 244 ASQLRHEGNRLFREHQVEAALLKYNEAVRLAPNDHLLYSNRSQIYFTLESHEDALHDAEIACKLRPMGFKAHFRKAQALATLGKVKEALKEFLYCVSLDGKNKSARS 350
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: LONF3_HUMAN (LON peptidase N-terminal domain and RING finger protein 3 OS=Homo sapiens GN=LONRF3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12 Identity = 39/106 (36.79%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 82 ADALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAK 399 A L+ EGN+L+ + A K++EA+ L P++H+LYSNRS Y +L++ + AL DA +L+ K RK AL +G + EA+ F + +SL+ N +A+ Sbjct: 243 ASQLRHEGNRLYRERQVEAALLKYNEAVKLAPNDHLLYSNRSQIYFTLESHENALHDAEIACKLRPMGFKAHFRKAQALATLGKVEEALREFLYCVSLDGKNKRAR 348
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: PPP5_MOUSE (Serine/threonine-protein phosphatase 5 OS=Mus musculus GN=Ppp5c PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.395e-12 Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 82 ADALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLESVRRAIDAEA 441 A+ LK + N F AKD+ A + +S+AI L+P N + Y NRS AY + + AL DA + EL + KG+ R+ A+ +G A+ +E + ++P + AK + + + +A Sbjct: 28 AEELKTQANDYFKAKDYENAIKFYSQAIELNPGNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPNDKDAKMKYQECSKIVKQKA 147
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: RPAP3_HUMAN (RNA polymerase II-associated protein 3 OS=Homo sapiens GN=RPAP3 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.659e-12 Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 1 Query: 91 LKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLESVRRAI 429 LK +GNK F + A + +++ + DP N VL +NR+ AY LK F A D N L + K + R+GAA + L EA +E L LEP N +A L + +A+ Sbjct: 136 LKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKISQAL 248
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.659e-12 Identity = 33/116 (28.45%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 82 ADALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLESVRRAI 429 A+ K++ N+ F ++ A + +++AI L+ +N V ++NR+ A+ L+ + A++DA+K E+ + ++KG+ R+GAA +G +A+ F+ L P + A L+ +A+ Sbjct: 13 AEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKECEKAV 128 The following BLAST results are available for this feature:
BLAST of FC877968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877968 ID=FC877968; Name=FC877968; organism=Citrus clementina; type=EST; length=805bpback to top |