FC877968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: RPAP3_MOUSE (RNA polymerase II-associated protein 3 OS=Mus musculus GN=Rpap3 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.152e-11 Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 91 LKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLESVRRAIDAE 438 LK +GNK F + A E +++ + DP N VL +NR+ AY LK F A D N L + K + R+GAA + L +A +E L LEP N +A L + +A+ ++ Sbjct: 137 LKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRTYTKAYARRGAARFALQKLEDARKDYEKVLELEPDNFEATNELRKINQALTSK 252
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: DYXC1_MOUSE (Dyslexia susceptibility 1 candidate gene 1 protein homolog OS=Mus musculus GN=Dyx1c1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11 Identity = 45/127 (35.43%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 85 DALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTEL----KADWA----KGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLESVRRAIDAEA 441 D LK +GNKLFA +++ A + ++ AI L+ +LY NR+ + LKN KA+ED++K EL AD A K R+G A + VE + +E AL ++P N + E +R I A Sbjct: 289 DWLKDKGNKLFATENYLAAVDAYNLAIRLNCKIPLLYLNRAACHLKLKNLHKAIEDSSKALELLTPPVADNANARMKAHVRRGTAFCQLELYVEGLQDYEAALKIDPANTVVQNDAEKIRNIIQGTA 415
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: UN45A_PONAB (Protein unc-45 homolog A OS=Pongo abelii GN=UNC45A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 73 ANMADALKAEGNKLFAAKDFAGAAEKFSEAIALDPSNH---VLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLESVRRAIDAEAK 444 A+ + L+ EGN+LF D+ GA +++A+ LD + VL+ NR+ Y L+++DKA +A+K E K R+ AL +G L +AV + +SLEP N + L ++ I + + Sbjct: 3 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACYLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIGGQIQEKVR 129
BLAST of FC877968 vs. ExPASy Swiss-Prot
Match: RPAP3_CHICK (RNA polymerase II-associated protein 3 OS=Gallus gallus GN=RPAP3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 103 GNKLFAAKDFAGAAEKFSEAIALDPSNHVLYSNRSGAYASLKNFDKALEDANKTTELKADWAKGWGRKGAALHGVGDLVEAVDAFEHALSLEPTNAQAKAGLESVRRAI 429 GN F + A E ++ IA D +N +L +NR+ AY ++ +++A D + L A ++K + R+GAA +G L EA+ FE L LEP N QA L +R + Sbjct: 290 GNGYFKEGKYEAAIECYTRGIAADGTNALLPANRAMAYLKIQKYEEAENDCTQALLLDASYSKAFARRGAARVALGKLKEAMQDFEAVLKLEPGNKQAINELTKIRNEL 398 The following BLAST results are available for this feature:
BLAST of FC877968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877968 ID=FC877968; Name=FC877968; organism=Citrus clementina; type=EST; length=805bpback to top |