FC877992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877992 vs. ExPASy Swiss-Prot
Match: ERLN2_DANRE (Erlin-2 OS=Danio rerio GN=erlin2 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 6.288e-77 Identity = 141/240 (58.75%), Postives = 181/240 (75.42%), Query Frame = 1 Query: 205 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKXEEIDNQMYLARQRGLADADFY 924 H+I EGHVGVY+RGGALL + PGFHL LP IT ++ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L VY +R++ YDK I++K+HHE+NQFCS H+LQ VYI +FDQIDE +K LQ D T APG+ I +VRVTKP IP+ IRRN+E ME ERT++LIA + QKV EKEAET +K A+ EAEK A V++I QK+MEK++ +K +I++ YLARQ+ ADA+FY Sbjct: 23 HKIEEGHVGVYYRGGALLTATSGPGFHLMLPFITTFKSVQTTLQTDEVKNVPCGTGGGVMIYFDRIEVVNYLVPSAVYGIVRNFTADYDKALIFNKVHHELNQFCSVHTLQDVYIGLFDQIDENLKLTLQEDLTSMAPGLIIQAVRVTKPNIPESIRRNYELMESERTKLLIAAQTQKVVEKEAETERKKAVIEAEKVAQVAEIKFGQKVMEKETEKKISQIEDSAYLARQKAKADAEFY 262
BLAST of FC877992 vs. ExPASy Swiss-Prot
Match: ERLN1_XENTR (Erlin-1 OS=Xenopus tropicalis GN=erlin1 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.401e-76 Identity = 136/240 (56.67%), Postives = 184/240 (76.67%), Query Frame = 1 Query: 205 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKXEEIDNQMYLARQRGLADADFY 924 H++ EGH+ VY+RGGALL PG+H+ P IT++ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L VY+ +R+Y YDKT I++KIHHE+NQFCSSH+LQ+VYI++FDQIDE +K +LQ++ APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA ++QKV EKEAET +K A+ EAEK A V+KI QK+MEK++ + EI++ YLAR++ ADA++Y Sbjct: 24 HKVEEGHLAVYYRGGALLGGPGDPGYHIMFPFITYFRSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNMLTPSAVYDVVRNYTADYDKTLIFNKIHHELNQFCSSHTLQEVYIELFDQIDENLKLSLQMELNVMAPGLTIQAVRVTKPKIPEAIRRNFELMESEKTKLLIAEQRQKVVEKEAETERKKAVIEAEKVAQVAKIQYRQKVMEKETEKFISEIEDSAYLAREKAKADAEYY 263
BLAST of FC877992 vs. ExPASy Swiss-Prot
Match: ERL2A_XENLA (Erlin-2-A OS=Xenopus laevis GN=erlin2-A PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.830e-76 Identity = 139/240 (57.92%), Postives = 185/240 (77.08%), Query Frame = 1 Query: 205 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKXEEIDNQMYLARQRGLADADFY 924 H+I EGHVGVY+RGGALL T + PGFHL P IT ++ VQ TLQTD++ ++PCGT GGVMI F++IEVVN L VY+ ++++ YDK I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D APGI I +VRVTKP IP+ I RNFE ME E+T++LIA +KQKV EKEAET +K AI EAEK A V++I +QK+MEK++ +K EI++ ++AR++ ADA++Y Sbjct: 24 HKIEEGHVGVYYRGGALLSTTSGPGFHLMFPFITSFKSVQSTLQTDEIKNVPCGTSGGVMIYFDRIEVVNYLISSAVYDIVKNFTADYDKALIFNKIHHELNQFCSVHNLQEVYIELFDQIDENLKLALQEDLNLMAPGIIIQAVRVTKPKIPEAIGRNFELMEGEKTKLLIAAQKQKVVEKEAETERKKAIIEAEKVAQVAQIKYKQKVMEKETEKKISEIEDFAFVAREKARADAEYY 263
BLAST of FC877992 vs. ExPASy Swiss-Prot
Match: ERLN1_DANRE (Erlin-1 OS=Danio rerio GN=erlin1 PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.642e-75 Identity = 135/240 (56.25%), Postives = 182/240 (75.83%), Query Frame = 1 Query: 205 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMEQKLMEKDSARKXEEIDNQMYLARQRGLADADFY 924 H+I EGH+ VY+RGGALL + PG+H+ LP IT Y VQ TLQTD++ ++PCGT GGVMI F++IEVVN L V + +R+Y YDKT I++KIHHE+NQFCS H+LQ+VYI++FD IDE +K ALQ D APG+ I +VRVTKP IP+ IRRN+E ME E+TR+LI ++ QKV EKEAET +K AI EA+K A V++I +QK+MEK++ +K EI++ +LAR++ ADA++Y Sbjct: 24 HKIEEGHLAVYYRGGALLTSPNGPGYHIMLPFITSYRSVQTTLQTDEIKNVPCGTSGGVMIYFDRIEVVNMLIPTSVVDIVRNYTADYDKTLIFNKIHHELNQFCSVHTLQEVYIELFDIIDENLKTALQKDLNCMAPGLTIQAVRVTKPKIPEAIRRNYELMEAEKTRLLITVQTQKVVEKEAETERKKAIIEAQKVAQVAEIQFQQKVMEKETEKKISEIEDAAFLAREKARADAEYY 263 The following BLAST results are available for this feature:
BLAST of FC877992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877992 ID=FC877992; Name=FC877992; organism=Citrus clementina; type=EST; length=931bpback to top |