FC877996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_VIBC3 (Peptidyl-tRNA hydrolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=pth PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.464e-22 Identity = 59/188 (31.38%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 L VGL NPG +Y TRHN G +++ A +++ N G+ + + + P T+MNLSG++ LA +Y++ ++V HD++ LP GV K ++ N+EF RLR+GIG P + ++L K A +E +D A+ E V L++L+ GLT++ HT + Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLIPTTFMNLSGKAIAALANFYQIKPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISKLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMKDGLTKAQNRLHTFK 194
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_HAES2 (Peptidyl-tRNA hydrolase OS=Haemophilus somnus (strain 2336) GN=pth PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.912e-22 Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 L VGLGNPGDKY TRHN G +I+ A +++ + + + P T+MNLSG++ LA +Y++P ++LV HD++ LP G+ K ++ N+ F RLRIGIG P + +++L K + + ID L E + +++L+ +G+T++ + + Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIERLARRFNFNLSVESKFSGKTARAVISGQEMRFLVPTTFMNLSGKAVSALANFYRIPPEQILVLHDELDLPPGIAKLKQGGGHGGHNGLKDIIAQLANNKNFYRLRIGIGHPGDKNLVASYVLNKPSPTDWQLIDRTLDEATDCIEILMKEGITKATNRLNAFK 193
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_ELUMP (Peptidyl-tRNA hydrolase OS=Elusimicrobium minutum (strain Pei191) GN=pth PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.912e-22 Identity = 58/184 (31.52%), Postives = 92/184 (50.00%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L VGLGNPG +Y TRHN GF ++D A G++ N + + +G V LAKP T+MNLSG LA +YK+ +LV DD+ + G K+++ F G ++ RLR G+G P + D ++L KF+ + ++ +++ VE + + GL + F+ Sbjct: 4 LIVGLGNPGPQYAVTRHNAGFMIVDNLAVKLGVNFNAYKNLGEYVKTTIGGQDVFLAKPLTFMNLSGRMVTHLAGFYKIKPQEILVCFDDISINLGAVRIRKDGSAGGQNGMKNIIELF-GTQDIPRLRFGVGPKPERFDSADYVLSKFSKSDEKLLNESIEAAVEAAESCVKDGLERAMNKFN 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_SYMTH (Peptidyl-tRNA hydrolase OS=Symbiobacterium thermophilum GN=pth PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.498e-22 Identity = 65/187 (34.76%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG--DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 L VGLGNPG +Y TRHN G+ ++DAFA G+++ + +G+ G V+L KP TYMNLSG S A +Y++ +LV DD+ L G KSV+ G EF RLRIGIGRP + ++L F + AL VE ++ L++G+ + ++T Sbjct: 4 LIVGLGNPGPRYAATRHNAGWMLLDAFARKHGVAIEQRGFEGLYGELRWGAEAEKVILLKPLTYMNLSGRSVAQAARFYRIAPADILVLFDDLDLEPGRLRLRAKGSAGGHNGVKSVIAEL-GTAEFPRLRIGIGRPAPGWEVIDWVLAPFGPDDAAAVAAALPRAVEAVECFLTEGILAAMNRYNT 189
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MARMS (Peptidyl-tRNA hydrolase OS=Marinomonas sp. (strain MWYL1) GN=pth PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.498e-22 Identity = 59/188 (31.38%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 L VGLGNPG +Y+ TRHN G + I+A A S+ + FG+ ++ L P TYMNLSG++ + +YK+P VLV HD++ +P G K +++ NREF RLRIGIG P ++L+K +I+ A+ E + + ++ L H+ + Sbjct: 6 LLVGLGNPGSEYENTRHNAGAQWIEALARQSQCSLRSEKKFFGQFGKVYIAGEECYLLIPTTYMNLSGKAVQAVCQFYKIPPEEVLVIHDELDIPPGTAKLKQGGGHGGHNGLKDIISKLANNREFGRLRIGIGHPGHASQVANYVLKKAAPDDYTKIEQAIDESLRYVDDIVRGNLNAVMNQLHSFK 193
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_HAES1 (Peptidyl-tRNA hydrolase OS=Haemophilus somnus (strain 129Pt) GN=pth PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.498e-22 Identity = 55/188 (29.26%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 L VGLGNPGDKY TRHN G +I+ A +++ + + + P T+MNLSG++ LA +Y++P ++LV HD++ G+ K ++ N+ F RLRIGIG P + +++L K + R+ ID +L+E + +++L+ +G+T++ + + Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIERLARRFNFNLSVESKFSGKTARAVISGQEMRFLVPTTFMNLSGKAVSALANFYRIPPEQILVLHDELDFSPGIAKIKQGGGHGGHNGLKDIIAQLANNKNFYRLRIGIGHPGDKNLVASYVLNKPSPTDRQLIDRSLEEATDCIEILMKEGITKATNRLNAFK 193
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_HAEIN (Peptidyl-tRNA hydrolase OS=Haemophilus influenzae GN=pth PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.498e-22 Identity = 60/190 (31.58%), Postives = 95/190 (50.00%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQG---FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 L VGLGNPGDKY TRHN G +I+ A +S+N FG+ V V L P T+MNLSG++ G LA++Y++ +LV HD++ LP G K ++ N F RLRIGIG P + ++L K + R+ ++ L E + ++++ G+ ++ ++ + Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPE--SKFFGKTARTLVNGKEVRLLVPTTFMNLSGKAVGALASFYRIKPEEILVIHDELDLPPGTAKLKQGGGHGGHNGLKDIVAQLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFRDGMVKATNRLNSFK 193
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_ANADF (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=pth PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.498e-22 Identity = 63/179 (35.20%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 873 L VGLGNPG +Y TRHNVGF + D A + + +G G V + KPQTYMN SGES G ++KL L ++V HDD+ L KSV N G ++AR+R+G+GRPP +MDP ++L +F ++ L E +L + G ++ Sbjct: 3 LVVGLGNPGPEYARTRHNVGFLVADRLALALRAEFTLRKFASELAEGRAGGERVWIMKPQTYMNHSGESVGSALHFWKLGLEDLVVVHDDLELEPFRVQLKVGGGHGGHNGLKSV-NAHVGGPDYARVRVGVGRPPPRMDPADYVLGRFAKADEAPLEECLVRATEAARLAIELGAAKA 180
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_NITEC (Peptidyl-tRNA hydrolase OS=Nitrosomonas eutropha (strain C91) GN=pth PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22 Identity = 61/189 (32.28%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQK 900 L VGLGNPGDKY TRHN+G + +D A++Q +S + + + D + L KPQTYMN SG S G + YYK+ ++LV HD++ L G+ KS++ + + F RLRIG+G P + ++L ID A+ ++V L+ + + HT Q+ Sbjct: 7 LVVGLGNPGDKYTSTRHNIGSDWLDRLADAQRVSFALDIRFRGLCARIVQSDTDIWLLKPQTYMNASGMSVGAMCRYYKITPEQILVVHDELDLQPGIIKLKSGGGTGGHNGLKSIVADL-STQVFWRLRIGVGHPGDRNQVVDYVLHLPRREEAALIDEAIDHSIQVWPLIARGNFAAAMQQLHTRQE 194
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_HAEI8 (Peptidyl-tRNA hydrolase OS=Haemophilus influenzae (strain 86-028NP) GN=pth PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22 Identity = 59/190 (31.05%), Postives = 95/190 (50.00%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQG---FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 L VGLGNPG+KY TRHN G +I+ A +S+N FG+ V V L P T+MNLSG++ G LA++Y++ +LV HD++ LP G K ++ N F RLRIGIG P + ++L K + R+ ++ L E + ++++ G+ ++ ++ + Sbjct: 6 LIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPE--SKFFGKTARTLVNGKEVRLLVPTTFMNLSGKAVGALASFYRIKPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEIIFKDGMIKATNRLNSFK 193 The following BLAST results are available for this feature:
BLAST of FC877996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877996 ID=FC877996; Name=FC877996; organism=Citrus clementina; type=EST; length=905bpback to top |