FC877996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_DEHE1 (Peptidyl-tRNA hydrolase OS=Dehalococcoides ethenogenes (strain 195) GN=pth PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.399e-27 Identity = 68/188 (36.17%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQ---MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 L +GLGNPG +Y G RHNVGF+ + FA+ IS + C + G G + D ++LAKPQTYMNLSG++ L Y L ++V DD+ LP G S++ + G +EF RL+IGIG+P + + +L F RE +D A+ E L LL+ GL ++ F++ Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKPQTYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI-GTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCLLTFGLDTASNRFNS 189
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACCZ (Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ZK / E33L) GN=pth PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.399e-27 Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ + +V +DD+ +P G KS +++ G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K + F++ Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACCR (Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=pth PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 4.399e-27 Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ + +V +DD+ +P G KS +++ G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K + F++ Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACCQ (Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain Q1) GN=pth PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.399e-27 Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ + +V +DD+ +P G KS +++ G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K + F++ Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACC1 (Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 10987) GN=pth PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 4.399e-27 Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ + +V +DD+ +P G KS +++ G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K + F++ Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_GEOKA (Peptidyl-tRNA hydrolase OS=Geobacillus kaustophilus GN=pth PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.745e-27 Identity = 65/161 (40.37%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 819 LFVGLGNPG +Y+ TRHNVGF +ID A+ +S+ T + FG V V L KP TYMNLSGE PL YY + ++ V+V +DD+ LP G KS++++ G +F R+RIGIGRP G ++L +F + +D A+ Sbjct: 3 LFVGLGNPGKEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPLTYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL-GTEQFKRIRIGIGRPAGGQPVTDYVLGRFTEEEKPAVDKAV 162
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACHK (Peptidyl-tRNA hydrolase OS=Bacillus thuringiensis subsp. konkukian GN=pth PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.745e-27 Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ + +V +DD+ +P G KS +++ G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K + F++ Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACAN (Peptidyl-tRNA hydrolase OS=Bacillus anthracis GN=pth PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.745e-27 Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHT 891 L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ + +V +DD+ +P G KS +++ G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K + F++ Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_RHOSR (Peptidyl-tRNA hydrolase OS=Rhodococcus sp. (strain RHA1) GN=pth PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.799e-27 Identity = 63/186 (33.87%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L VGLGNPG +Y+ TRHNVGF + + G + H K A QG P +LAKP+++MNLSG + LA ++ + ++V HD++ L G +S+ + G +++ R R+GIGRPPG+MDP +++L+ F+++ R+ +D +E + ++L+L GL + H Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKFSA-HKKSGAEIVQGRFEGRPTILAKPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISSAL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRVGLEAAQNRLH 190
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACSU (Peptidyl-tRNA hydrolase OS=Bacillus subtilis GN=spoVC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.799e-27 Identity = 70/184 (38.04%), Postives = 92/184 (50.00%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 + GLGNPG Y+ TRHNVGF +ID A+ I +N +G GFV VLL KP TYMNLSGE PL YY + + V +DD+ LP G KS++ + G EF R+RIGIGRP M ++L F I+ A+ + V+ + LSK E F+ Sbjct: 3 VIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEEAVDKSVKACEASLSKPFLEVMNEFN 185 The following BLAST results are available for this feature:
BLAST of FC877996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877996 ID=FC877996; Name=FC877996; organism=Citrus clementina; type=EST; length=905bpback to top |