FC877996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACLD (Peptidyl-tRNA hydrolase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pth PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26 Identity = 68/184 (36.96%), Postives = 93/184 (50.54%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +F GLGNPG Y+ TRHNVGF ID ++ I ++ +G GFV VLL KP TYMNLSGE PL YY++P++ + V +DD+ LP G KS + + G EF R+RIGIGRP M ++L F I A+++ + + L K E F+ Sbjct: 3 VFAGLGNPGKTYENTRHNVGFMTIDELSKEWNIPLDKTKFNGQYGIGFVSGKKVLLVKPLTYMNLSGECLRPLLDYYEIPVDNLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSTIQHL-GTSEFNRIRIGIGRPVNGMKVVDYVLGAFTDEEEPAIKEAVRQSAKACEASLEKPFLEVMNEFN 185
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_RHOE4 (Peptidyl-tRNA hydrolase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=pth PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.183e-26 Identity = 64/186 (34.41%), Postives = 102/186 (54.84%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L +GLGNPG +Y+ TRHNVGF + A G N VH K A +G + V+L KP++YMNLSG + LA ++ + ++V HD++ L G +S+ ++ +++ R R+GIGRPPG+MDP ++L+ F++ R+ +D +E + ++LLL GL + H Sbjct: 7 LVIGLGNPGPQYEKTRHNVGFMVAGTLAGRMGGKFN-VHKKSGAEIVEGRLAGRRVILGKPRSYMNLSGGAVAGLARFFSVDAANIIVVHDELDLDFGTIRLKLGGGEGGHNGLRSISSSLT-TKDYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLVCEEAADAVELLLELGLEAAQNRLH 190
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_DESRM (Peptidyl-tRNA hydrolase OS=Desulfotomaculum reducens (strain MI-1) GN=pth PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.183e-26 Identity = 73/189 (38.62%), Postives = 102/189 (53.97%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQK 900 L VGLGNPG +Y TRHN+GF +ID A+ +S KA Q +G V+LAKPQTYMNLSG+S L +YKL + + V DDM LP GV K+++ G ++F R+R+GIGRP G +D +L K + E I+ A+Q VE +K+ + +G + F+ K Sbjct: 3 LIVGLGNPGTEYAKTRHNIGFMVIDRLADESRVSTEKNQHKAQICQITIGSEKVILAKPQTYMNLSGQSVVALMNWYKLSPDELFVITDDMDLPPGVLRIRKNGSAGGQRGLKNII-ELLGTQQFPRMRVGIGRPEHGAVD---HVLGKISEAEAELINPAIQTAVEAVKVWVLEGTQAAMNKFNQKNK 187
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOK5 (Peptidyl-tRNA hydrolase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=pth PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.183e-26 Identity = 65/185 (35.14%), Postives = 103/185 (55.68%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +L VGLGN G KY TRHN+GF+ ID ++ I++N K +G+GF+G V+L KP TYMNLSGES +YK+ +R+++ +DD+ + G K+++ N G F R++IGIG P +D +++L KF+ R I+ L+ VE L+ ++ G+ + F+ Sbjct: 2 FLIVGLGNIGVKYHRTRHNIGFDFIDLVSKKYNITLNREKFKGNYGEGFIGQNKVILLKPGTYMNLSGESVREAVNFYKIENDRMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIILNL-GTDVFPRIKIGIGHP--NVDLVSYVLGKFSEDDRINIEKVLKTSVEALECIMDFGIEVAMNKFN 183
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOK1 (Peptidyl-tRNA hydrolase OS=Clostridium kluyveri (strain NBRC 12016) GN=pth PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.183e-26 Identity = 65/185 (35.14%), Postives = 103/185 (55.68%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +L VGLGN G KY TRHN+GF+ ID ++ I++N K +G+GF+G V+L KP TYMNLSGES +YK+ +R+++ +DD+ + G K+++ N G F R++IGIG P +D +++L KF+ R I+ L+ VE L+ ++ G+ + F+ Sbjct: 2 FLIVGLGNIGVKYHRTRHNIGFDFIDLVSKKYNITLNREKFKGNYGEGFIGQNKVILLKPGTYMNLSGESVREAVNFYKIENDRMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIILNL-GTDVFPRIKIGIGHP--NVDLVSYVLGKFSEDDRINIEKVLKTSVEALECIMDFGIEVAMNKFN 183
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_ARTCA (Peptidyl-tRNA hydrolase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=pth PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.183e-26 Identity = 62/187 (33.16%), Postives = 99/187 (52.94%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGF--VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 WL VGLGNPG +Y+G RHNVG ++D A G + +A +G +G V+LAKP TYMN+SG LA +Y + + V+ HD++ +P + + +++ R+R+G+GRPPG+MD ++L+ F + + L E + ++LLL +GLT + + FH Sbjct: 5 WLIVGLGNPGAQYQGNRHNVGQMVLDELAGRVGAGFKSHKARAQVVEGRLGIGGPRVVLAKPMTYMNVSGGPVSALANFYGISPDHVVAVHDEIDIPFNTVKLKIGGGEGGHNGLRDISKAL-ATKDYLRVRVGVGRPPGRMDTADYVLRDFGTAELKELPFLLDEAADAVELLLQEGLTAAQQKFH 190
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOBK (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Okra / Type B1) GN=pth PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26 Identity = 63/188 (33.51%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTIQ 897 +L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+ ++V +DDM + G K+++ + + F R+R+GIG+P + ++L KF+ RE ID L + ++ G+TE+ ++ ++ Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSD-IFPRVRVGIGQPDENV--VNYVLGKFSKDQREIIDKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MOOTA (Peptidyl-tRNA hydrolase OS=Moorella thermoacetica (strain ATCC 39073) GN=pth PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26 Identity = 68/180 (37.78%), Postives = 96/180 (53.33%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 876 + VGLGNPG +Y TRHN GF ++D A+ GI+++ +A GQG VG+ VLL KPQTYMN SG++ PLA +Y + +LV HDD+ L G +S++ + G RL+IGIGRPP + ++L+ F+ E I L E + LL G + A Sbjct: 6 MVVGLGNPGPRYATTRHNAGFMVVDLLADDLGITLDRTREQALTGQGLVGNNRVLLVKPQTYMNNSGQAVAPLARWYGIAPEAILVIHDDLDLAPGRLRLRRGGSSGGHRGLQSIITHL-GTTAVPRLKIGIGRPPLGQNVIDYVLKPFSEGDWELIRPVLLEAARAARFLLEGGSMDEA 184
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_EXIS2 (Peptidyl-tRNA hydrolase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=pth PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26 Identity = 63/165 (38.18%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 343 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 837 VGLGNPG KY TRHN+GF IDA A+ GI + KA FG G + V+L KP TYMNLSGE+ PL +YK+ + VLV +DD+ LP KS++ + G ++ RL++G+GRPP + ++L F + + L + V + Sbjct: 5 VGLGNPGAKYTNTRHNIGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVKPLTYMNLSGEAVRPLLDFYKIAVEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHL-GTQDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQTTLQHVLSDSVNI 168
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_ANASK (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter sp. (strain K) GN=pth PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26 Identity = 67/175 (38.29%), Postives = 96/175 (54.86%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 861 L VGLGNPG++Y TRHNVGF + D A+ G S + A + +G V + KPQTYMN SGE+ G ++KL L+ ++V HDD+ L KSV N G+ E+AR+R+G+GRPP +MDP ++L KF +D +++ VE +L + G Sbjct: 3 LVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMKPQTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSV-NAHVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELG 176 The following BLAST results are available for this feature:
BLAST of FC877996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877996 ID=FC877996; Name=FC877996; organism=Citrus clementina; type=EST; length=905bpback to top |