FC877996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOB8 (Peptidyl-tRNA hydrolase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pth PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 63/174 (36.21%), Postives = 98/174 (56.32%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF----NAIARERIDTALQEGVEVLK 843 +L VGLGNPG++Y+ TRHN+GF++ID A+ I +N K +G+GF+ V+L KP TYMNLSGES + +Y L + +LV +DD+ L G KS++ + + F+R+++G+G+P G D +L KF AI E I+ + + E++K Sbjct: 2 FLIVGLGNPGNEYENTRHNIGFKVIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLKPTTYMNLSGESVREVVDFYNLNNDEILVIYDDISLEVGKLRIREKGSAGGHNGIKSIIAHL-NSEIFSRIKVGVGQPNG--DLVKHVLGKFTKEETAILSESIEASTKAAAEIIK 172
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_KINRD (Peptidyl-tRNA hydrolase OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=pth PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.377e-25 Identity = 62/192 (32.29%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP-------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 WL VGLGNPG +Y+ TRHNVG ++D A S A + +G AP V+LA P +YMN+SG LA Y+ + + ++V HD++ +P G +S+ + G++++AR+R+GIGRPPG+ DP F+L++F++ ++ + + + + ++ L+ KG + + FH Sbjct: 5 WLVVGLGNPGAEYERTRHNVGQMVLDELASRTRGSFKRHRTGARTAEVRLGVAPGGAPGPRVVLAAPTSYMNVSGGPVAGLAKYFDVDVEHLVVVHDELDVPFGSVRLKRGGGEGGHNGLRSISKSL-GDKDYARVRVGIGRPPGRQDPADFVLKEFSSTEKKDMPFLVMDAADAVEELVIKGFEAAQQKFH 195
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOBB (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=pth PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25 Identity = 61/174 (35.06%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLK 843 +L VGLGNPG KY TRHN+GFE+ID + I +N + +G+GF+ + V+L KP TYMNLSG+S +A +YK+ ++V +DD+ L G KS++ N F R+++G+G+P +D ++L KF+ + +E I+ A E++K Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLKPTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL-STDVFPRIKVGVGQP--NIDLVNYVLGKFSKEEKEVLKESIEVATNSVEEIIK 172
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_BACA2 (Peptidyl-tRNA hydrolase OS=Bacillus amyloliquefaciens (strain FZB42) GN=pth PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25 Identity = 67/184 (36.41%), Postives = 90/184 (48.91%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 + GLGNPG Y+ TRHNVGF ID ++ I +N +G GFV VLL KP TYMNLSGE P+ YY + V +DD+ LP G KS++ + G EF R+RIGIGRP M ++L F I+ A+ + V+ + L+K E F+ Sbjct: 3 VIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPLTYMNLSGECLRPILDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEVMNEFN 185
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_THETN (Peptidyl-tRNA hydrolase OS=Thermoanaerobacter tengcongensis GN=pth PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25 Identity = 63/185 (34.05%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 ++ GLGNPG +Y+GTRHNVGF +IDA ++ GI ++ + K+ G+G V+L KPQT+MNLSGE+ +YK+PL V+V +DD L G S++ + +F R+RIGIG+P D +L +F+ ++ ID A++ E + ++ G+ + F+ Sbjct: 2 YIIAGLGNPGKEYEGTRHNVGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLKPQTFMNLSGEALYDAVNFYKIPLENVIVVYDDKDLEVGKIRIRRKGSSGGHNGMNSII-YLLNSEDFPRVRIGIGKPE-DGDLVRHVLGRFSDEEKKVIDEAVERAAEAVIDIMENGIEHAMSRFN 184
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_SYNJB (Peptidyl-tRNA hydrolase OS=Synechococcus sp. GN=pth PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25 Identity = 66/187 (35.29%), Postives = 97/187 (51.87%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFHTI 894 L VGLGNPG +Y TRHN GF ++D A+ GI + + ++G+GF L KP+TYMN SG+S + +YKL L VLV +DDM LP G KS++ + G+ F RLR+G+G+P G D +L F +E ++ L VE ++ +GL + F+ + Sbjct: 16 LVVGLGNPGPQYANTRHNCGFMVVDRLAQRWGIPLVLEKRFQGSYGEGFALGGKRRLLKPETYMNRSGQSVRAVLDWYKLDLASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSIIQHL-GSEAFPRLRLGVGKPKGSQDVVGHVLGGFAPAEQEVLERVLDVAVEAVECCWQEGLRTAMNRFNPL 201
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MYCA9 (Peptidyl-tRNA hydrolase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=pth PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25 Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L VGLGNPG Y TRHN+GF + D A G + H K+ + G V LAKP+T+MN SG LA ++ +P V+V HD++ L G +SV + G +++ R+R+G+GRPPG+ DP AF+L+ F +++ ++G + +LL+ GL + H Sbjct: 10 LVVGLGNPGPNYAKTRHNLGFMVADLLAAKDGATFKP-HKKSGAEATTIRLGGRAVNLAKPRTFMNTSGPQVAALAKFFSVPPANVIVMHDELDLDFGTVRLKLGGGEGGHNGLRSVSQSL-GTKDYLRVRLGVGRPPGRKDPAAFVLENFAKAETDQVPLLCEQGADAAELLIRLGLEAAQNQVH 193
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_MANSM (Peptidyl-tRNA hydrolase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=pth PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25 Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 337 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATF----GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 L VGLGNPGDKY TRHN G +++ A ++ +A F + +G V P T+MNLSG++ G LA +Y++ +LV HD++ LP GV K + N+ F RLRIGIG P + A++L K + I R ID AL E +++LL G+T++ + Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLVERLARRFNFNLKD---EAKFFGKTARAVIGGEEVRFLIPTTFMNLSGKAVGALATFYRIKPEEILVIHDELDLPPGVAKIKQGGGHGGHNGLKDTIAQLANNKNFYRLRIGIGHPGDKNLVSAYVLSKPSPIDRSAIDKALDEAASCMEILLKDGITKATNRLN 190
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_CLOBA (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=pth PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25 Identity = 58/185 (31.35%), Postives = 100/185 (54.05%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 +L VGLGNPG KY TRHN+GFE+ID + I +N K +G+GF+ + V+L KP TYMNLSG+S +A +YK+ ++V +DD+ L G KS++ N F R+++G+G+P + ++L KF+ +E + +++ ++ ++ + + + F+ Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKPTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL-STDVFPRIKVGVGQPNDNL--VDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDINSAMNKFN 183
BLAST of FC877996 vs. ExPASy Swiss-Prot
Match: PTH_EUBR3 (Peptidyl-tRNA hydrolase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=pth PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.198e-24 Identity = 65/186 (34.95%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 334 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFH 888 ++ VGLGNP KY+ TRHN+GF++IDA A+ IS+ KA G G + VLL KPQTYMNLSGES + +YKL P ++V DD+ L G KS++ G + F+R+++G+G P D +L +F++ R +++ A+ ++ +L+ +G T+ A + + Sbjct: 2 YVIVGLGNPDKKYEHTRHNIGFDVIDALADKYNISVTDKKHKALCGSGVIEGMKVLLVKPQTYMNLSGESVAEVMNFYKLDPDEEMIVIFDDISLEPGRIRIRKKGSAGGHNGIKSII-AMTGTQGFSRIKVGVGEKPQGWDLADHVLGRFSSEDRAKVEEAIGHAMDA-AVLMMQGETDKAMNIY 185 The following BLAST results are available for this feature:
BLAST of FC877996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877996 ID=FC877996; Name=FC877996; organism=Citrus clementina; type=EST; length=905bpback to top |