FC878040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19 Identity = 56/112 (50.00%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 38 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFV-KVDQATLFDLIL 370 MSS K IVL S DGESFEVEEAVA + ++HMIEDDC +PL NVTGKIL+ VVEYCKKHV ++ K+WD +F+ K DQ T+F L+L Sbjct: 1 MSSNK-IVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHV-------------------VDEESDEFKTWDEEFMKKFDQPTVFQLLL 92
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.992e-19 Identity = 57/132 (43.18%), Postives = 68/132 (51.52%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVE----------------------VPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLIL 370 S K IVL S DGESF+VEE VA + + H+IEDDCA N IP+PNVTG+ILAKV+EYCKKHVE D +E L WD F+K D T+FD+IL Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIIL 133
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 6.992e-19 Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 38 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLIL 370 MSS K IVL S DGESF+VEE VA + +KH++EDDC N IPL NVTG IL+ V+EYCKKHV+ D +++L +WD +F+K +D T+F LIL Sbjct: 1 MSSNK-IVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVD--DVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLIL 109
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 7.731e-18 Identity = 57/126 (45.24%), Postives = 75/126 (59.52%), Query Frame = 2 Query: 38 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFV-KVDQATLFDLILVGIVYLFA*SKLGF 412 MSS K I+L S DGESFE++EAVA + I HM+ED+CA IPL NVTG IL+K++EY K HV P+ +D +++L SWD F+ K+D T+F +IL YL LGF Sbjct: 1 MSSNK-ILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEPSEED-----------EDEEAKKNLDSWDAKFMEKLDLETIFKIILAA-NYLNFEGLLGF 113
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 56 IVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQAT-LFDLIL 370 I+LKS DG+SFE++E VA +S I HM+ED CA + IPL NVT KIL V++YC+KHV+ EEDLK WD DF+K + T LFD+++ Sbjct: 5 IMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVK-------------------SKEEEDLKEWDADFMKTIETTILFDVMM 91
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK7_ARATH (SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.722e-17 Identity = 49/108 (45.37%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLI 367 S K I+LKS DG+ FE+EE A + TI HMIE +C DN IP+ NVT +IL V+EYC KH V A +EDLK WD +F++ DQ T+F L+ Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKH-HVDAAN--------------PCSDEDLKKWDKEFMEKDQYTIFHLM 94
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 49/109 (44.95%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLI 367 S K IVL S D E FE++EAVA + + HMI+DDCAD I L NVTGKILA ++EYCKKHV+ + + +WD +FVK +D TLF L+ Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKHVD------------------DVEAKNEFVTWDAEFVKNIDMDTLFKLL 92
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 53 MIVLKSCDGESFEVEEAVALESTTIKHMIED-DCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLIL 370 ++ L+S D + FE+E+ +A S TIK+MIED +D+ IPLPNVT IL KV++YC+ H + P+ Q +D+ +D DF KVDQ TLF+LIL Sbjct: 3 LVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRL--------DDIPPYDRDFCKVDQPTLFELIL 101
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.328e-14 Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 53 MIVLKSCDGESFEVEEAVALESTTIKHMIED-DCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLIL 370 ++ L+S D + FE+E+ +A S TIK+MIED +D IPLPNVT IL KV++YC+ H + P+ Q +D+ +D DF KVDQ TLF+LIL Sbjct: 3 LVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRL--------DDIPPYDRDFCKVDQPTLFELIL 101
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK6_ARATH (SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.040e-14 Identity = 42/83 (50.60%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 125 IKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFV-KVDQATLFDLIL 370 IK M EDDCADNGIPLPNVT KIL V+EYCKKHV EEDLK WD +F+ K++Q+ LFD+++ Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHV-------------------VESKEEDLKKWDAEFMKKMEQSILFDVMM 66 The following BLAST results are available for this feature:
BLAST of FC878040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878040 ID=FC878040; Name=FC878040; organism=Citrus clementina; type=EST; length=865bpback to top |