FC878063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 70/213 (32.86%), Postives = 103/213 (48.36%), Query Frame = 1 Query: 133 SKIIEFYALSPLNE-LAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXV-------------------------------YAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 SK+IEF LSP E L YA ++F+ I P+ +N + RG A SS P +A+ Y M+ ++ T F LK+CA+ A E QIH HVL+ + YA G I +A+K+FDE+ V+D+ SWNA+I+G A+ EA++LFK M V +P+E T++ ++AC G Sbjct: 69 SKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV-RPDESTMVTVVSACAQSG 280 HSP 2 Score: 85.5001 bits (210), Expect = 2.797e-16 Identity = 57/201 (28.36%), Postives = 97/201 (48.26%), Query Frame = 1 Query: 79 QAHLTTTGQFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXV--YAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 Q HL + + +I+ Y S EL A LF ++ +N ++ G H + A+L +++MLR + +T L ACA + A+ IH ++ + + YAK G+I +A +VF+ + + ++SWNA+I G A A + DLF RM+ G+ +P+++T +G L+AC H G Sbjct: 287 QVHLWIDDHGFGSNLKIVNALIDLY--SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI-QPDDITFVGLLSACSHSG 484 HSP 3 Score: 85.1149 bits (209), Expect = 3.653e-16 Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 184 AHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 A LF +I +NA++ G A + A+ ++ M++ + R D T + ACA+ ++ Q+H + H +Y+K GE+ +A +F+ + +D+ SWN LI G NL EA+ LF+ M G PN+VT+L L AC HLG Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLG 381
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 58/202 (28.71%), Postives = 94/202 (46.53%), Query Frame = 1 Query: 163 PLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIA-------------------------------GLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 P N L YA+ +F QI P+ FN ++R + ++P+ A +Y QML+ D +T F +KA + + + Q HS ++R +YA G I +A ++F +MG RD+ SW +++A G A+ N +A+DLF+ MK EGV NE ++ +++C HLG Sbjct: 63 PTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV-ANETVMVSVISSCAHLG 263
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 54/183 (29.51%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 127 VRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 V++ ++ YA ++A A+ +F ++ +N+++ G A + KP A+ Y +M + D T L ACA++ AL ++H ++++ +YA+ G + AK +FDEM ++ SW +LI GLA EA++LFK M+ P E+T +G L AC H G Sbjct: 158 VQNSLLHLYA--NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 338 HSP 2 Score: 87.4261 bits (215), Expect = 7.361e-17 Identity = 53/169 (31.36%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 175 LAYAHALFRQINAP-STNDFNAILRGLAHSSKPTNAVLWYRQM-LRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 ++YAH +F +I P + +N ++RG A +A YR+M + G D T F +KA + + IHS V+R +YA G++ SA KVFD+M +D+ +WN++I G A+ EA+ L+ M +G+ KP+ T++ L+AC +G Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIG 236
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 63/234 (26.92%), Postives = 113/234 (48.29%), Query Frame = 1 Query: 70 KQLQAHLTTTGQFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHR-SDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQ-GNLAS------------------------------EAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 K++ A + G QS + +K+++F + ++ YA LF Q++ P+ +N+I+R H+S + + Y+Q+LR S D T F K+CA + + + Q+H H+ + +Y K ++V A KVFDEM RD+ SWN+L++G A+ G + EA+D F+ M++ G+ +P+E++++ L +C LG Sbjct: 27 KKINASIIIHGLSQSSF--MVTKMVDF--CDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI-EPDEISLISVLPSCAQLG 255 HSP 2 Score: 69.707 bits (169), Expect = 1.588e-11 Identity = 46/170 (27.06%), Postives = 80/170 (47.06%), Query Frame = 1 Query: 166 LNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 L ++ A LF + + + A++ G A+ ++R+M D ++ L +CA++ +L IH + R +Y+K G I A ++F +M +D+ SW+ +I+G A A A++ F M+ V KPN +T LG L+AC H+G Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKV-KPNGITFLGLLSACSHVG 356
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP321_ARATH (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 60/185 (32.43%), Postives = 91/185 (49.19%), Query Frame = 1 Query: 67 IKQLQAHLTTTGQFQSKLCPVRSKIIEFYALSPLNE-LAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGV 618 I+Q A + TG F SK++ F A +P + ++YAH++ +I +P+ N+++R A+SS P A+ +R+ML G D + +F LKACA E QIH ++ VY + G A+KV D M VRD SWN+L++ + L EA LF M+ V Sbjct: 55 IQQAHAFMLKTGLFHDTFSA--SKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNV 237 HSP 2 Score: 82.4185 bits (202), Expect = 2.368e-15 Identity = 48/165 (29.09%), Postives = 83/165 (50.30%), Query Frame = 1 Query: 184 AHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGS-HRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 A +F + +NA++ AH + + +ML S + D T L ACA + +L + +H ++ +H +Y+K G+I A +VF RD+++WN++I+ L+ L +A+++F M EG FKPN +T +G L+AC H+G Sbjct: 256 AKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG-FKPNGITFIGVLSACNHVG 419
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 66/206 (32.04%), Postives = 101/206 (49.03%), Query Frame = 1 Query: 67 IKQLQAH-LTTTGQFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHS-SKPTNAVLWYRQML-RGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 +KQL A L TT + + KI++ S +++ YA +F I S+ +N ++R AH S+ A + YR+ML RG D T F LKACA + E Q+H +++H +Y G + A+KVFDEM R + SWN++I L + A+ LF+ M+ F+P+ T+ L+AC LG Sbjct: 64 LKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS--FEPDGYTMQSVLSACAGLG 265 HSP 2 Score: 77.411 bits (189), Expect = 7.618e-14 Identity = 57/172 (33.14%), Postives = 83/172 (48.26%), Query Frame = 1 Query: 175 LAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXV---YAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRM--KMEGVFKPNEVTVLGALAACGHLG 675 L A +F ++ S +N+++ L + +A+ +R+M R S D T L ACA + +L H+ +LR + Y K G + A++VF M RD+ASWNA+I G A A EA++ F RM K E V +PN VT +G L AC H G Sbjct: 202 LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENV-RPNSVTFVGLLIACNHRG 371
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP237_ARATH (Pentatricopeptide repeat-containing protein At3g16610 OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 58/183 (31.69%), Postives = 85/183 (46.45%), Query Frame = 1 Query: 127 VRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 V++ II FYA L A F +I +N+++ G + +P + + +M R D T L AC+ + AL H + + H +Y K G++ AK+VFD M RDI SWN ++ G L EA+ LF M+ GV P+EVT+L L+AC H G Sbjct: 345 VQNTIISFYA--KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGV-NPDEVTLLAILSACSHSG 524 HSP 2 Score: 85.1149 bits (209), Expect = 3.653e-16 Identity = 65/226 (28.76%), Postives = 100/226 (44.25%), Query Frame = 1 Query: 4 ALISTHCYKNAVVMSHFSHIHIKQLQAHLTTTGQFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTND--FNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 +L+ T +V+ H H+ + L+++ V + YA NE+ A +F +I P N ++ ++R A + A+ Y +ML R T F LKACA + A+ + IHSHV YAK GE+ A KVFDEM RD+ +WNA+I+G + ++ + LF M+ PN T++G A G G Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSS--------TVLVNLTRLYA--SCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18 Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 208 NAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 NA S + +N IL +P + ++ ML D +T L+ C + +L Q+H + L+ +YAK G + A+++FD M RD+ SW+ LI G AQ EA+ LFK MK G+ +PN VT +G L AC H+G Sbjct: 435 NADSVS-WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGI-EPNHVTFVGVLTACSHVG 588 HSP 2 Score: 68.5514 bits (166), Expect = 3.539e-11 Identity = 47/165 (28.48%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 169 NELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLR-GSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAA 660 N+++ A +F I +++I+ G + A+ ++ML G + +LKAC+ +L QIH ++ +YA+ G + SA++VFD++ D ASWN +IAGLA A EAV +F +M+ G F P+ +++ L A Sbjct: 217 NQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG-FIPDAISLRSLLCA 380
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP369_ARATH (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.098e-18 Identity = 60/216 (27.78%), Postives = 101/216 (46.76%), Query Frame = 1 Query: 124 PVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARV---------------------LALFETLQIHSH-----------VLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 P S+ + F ALS ++ YA+ +++ P +N ++RG ++S P ++ Y QMLR D +T F +K+ +R+ L + TL IH + + YAK G++VSA+ VFDEM RD+ +W+++I G + ++A+++F +M G K NEVT++ + AC HLG Sbjct: 41 PFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTL-IHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255 HSP 2 Score: 73.1738 bits (178), Expect = 1.437e-12 Identity = 53/184 (28.80%), Postives = 89/184 (48.37%), Query Frame = 1 Query: 133 SKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLR-GSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVR--DIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 + I++ YA S ++ A +F +++ +++++ G + A+ + QM+R GS +++ +T + ACA + AL +H ++L +YAK G I A VF V+ D WNA+I GLA E++ LF +M+ E P+E+T L LAAC H G Sbjct: 178 NSILDAYAKS--GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR-ESKIDPDEITFLCLLAACSHGG 358
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.658e-18 Identity = 52/168 (30.95%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 172 ELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 ++A A LF ++ +P+ +NA++ G A + A+ + +M+ R D ++ + A+ ACA+V +L + ++ +V R ++AK G + A+ VFD RD+ W+A+I G A EA+ L++ M+ GV PN+VT LG L AC H G Sbjct: 272 QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV-HPNDVTFLGLLMACNHSG 438 HSP 2 Score: 75.8702 bits (185), Expect = 2.216e-13 Identity = 61/223 (27.35%), Postives = 106/223 (47.53%), Query Frame = 1 Query: 1 NALISTHCYKNAVVMSHFSHIHIKQLQAHLTTTG-QFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGV--RDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAA 660 N+ I + + +++ S +KQ+ A L G QF L +K+I +A S ++ +A +F + P +NAI+RG + ++ +A+L Y M D+ T LKAC+ + L +H+ V R +YAK + SA+ VF+ + + R I SW A+++ AQ EA+++F +M+ V KP+ V ++ L A Sbjct: 15 NSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLI---TKLI--HASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV-KPDWVALVSVLNA 231 HSP 3 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 49/185 (26.49%), Postives = 90/185 (48.65%), Query Frame = 1 Query: 127 VRSKIIEFYALSPLNELAYAHALFRQINAPSTN--DFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675 V++ +I YA L A +F + P + AI+ A + +P A+ + QM + + D + L A + L + IH+ V++ +YAK G++ +AK +FD+M ++ WNA+I+G A+ A EA+D+F M + V +P+ +++ A++AC +G Sbjct: 156 VQNGLIALYA--KCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV-RPDTISITSAISACAQVG 337 The following BLAST results are available for this feature:
BLAST of FC878063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 154
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878063 ID=FC878063; Name=FC878063; organism=Citrus clementina; type=EST; length=676bpback to top |