FC878063

Overview
NameFC878063
Unique NameFC878063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP431_ARATH (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 54/202 (26.73%), Postives = 90/202 (44.55%), Query Frame = 1
Query:   70 KQLQAHLTTTGQFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            KQ+ A +   G F ++   + +K++ FYA    + L  A  LF ++   +   + AI+           A++ + +ML      D        KAC  +        +H +V++               +Y K G +  A KVFDE+  R+  +WNAL+ G  Q     EA+ LF  M+ +GV +P  VTV   L+A  ++G
Sbjct:   90 KQIHARILKNGDFYARNEYIETKLVIFYA--KCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGV-EPTRVTVSTCLSASANMG 288          

HSP 2 Score: 75.0998 bits (183), Expect = 3.781e-13
Identity = 50/169 (29.59%), Postives = 79/169 (46.75%), Query Frame = 1
Query:  133 SKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVT 639
            + ++ FY    L E  YA  +F ++       +N I+ G        +A+   + M     + D +T +  + A AR   L    ++  + +RH              +YAK G IV AKKVFD    +D+  WN L+A  A+  L+ EA+ LF  M++EGV  PN +T
Sbjct:  313 TSLLNFYCKVGLIE--YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV-PPNVIT 478          

HSP 3 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 44/156 (28.21%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  214 PSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRH-XXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGV-FKPNEVTVLGALAACGHLG 675
            P+   +  ++ G+  +     A+L+ R+M     R +A + + AL ACA + +L     IH +++R+               +YAK G+I  A+KVF      ++   NA+I+  A      EA+ L++   +EGV  KP+ +T+   L+AC H G
Sbjct:  509 PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYR--SLEGVGLKPDNITITNVLSACNHAG 662          
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP329_ARATH (Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana GN=PCMP-E35 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 1
Query:  193 LFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDE-MGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHL 672
            +F  I  PS + +NA+L G ++      A+  +RQM   + + D  T S  L +CAR+  L    QIH  V+R               VY++  ++  ++ +FD+ +   DIA WN++I+G     L ++A+ LF+RM    V  PNE +    L++C  L
Sbjct:  372 IFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRL 532          

HSP 2 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 55/195 (28.21%), Postives = 90/195 (46.15%), Query Frame = 1
Query:  112 SKLCPVRSKIIEFYALSPLNELAYAHALFRQ-INAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTC----SFA--LKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            SK   + S +I  Y  S   ++  +  +F   IN      +N+++ G  H+   T A++ +R+M        A+ C    SFA  L +C+R+ +L    Q H  V++               +Y K GEI SA++ FD +  ++   WN +I G        EAV L+++M   G  KP+ +T +  L AC H G
Sbjct:  448 SKNSHIVSGLIAVY--SECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRM-----HQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSHSG 634          

HSP 3 Score: 69.3218 bits (168), Expect = 2.075e-11
Identity = 48/174 (27.59%), Postives = 79/174 (45.40%), Query Frame = 1
Query:  181 YAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFAL------KACARVLALFET---LQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            Y   +F  ++ P+   + A++ GLA  +K   AV  +R M     + D++  S  L      + C  +  ++      QIH   LR               +YAK  ++  A+ +F EM   ++ SWN +I G  Q   + ++V+   RM+  G F+PNEVT +  L AC   G
Sbjct:  192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSG-FQPNEVTCISVLGACFRSG 364          
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PPR65_ARATH (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 44/156 (28.21%), Postives = 72/156 (46.15%), Query Frame = 1
Query:  205 INAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHL 672
            +  PS   +N +L+ LA     T  +  + ++       D  T    LK+  R+  + E  ++H + ++               +YA +G+I    KVFDEM  RD+ SWN LI+         +A+ +FKRM  E   K +E T++  L+AC  L
Sbjct:    6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSAL 161          

HSP 2 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 48/164 (29.27%), Postives = 75/164 (45.73%), Query Frame = 1
Query:  184 AHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            A  LF +        + A++ G    ++   A+  +R M     R D       L  CA+  AL +   IH ++  +              +YAK G I +A +VF E+  RD ASW +LI GLA   ++  A+DL+  M+  GV + + +T +  L AC H G
Sbjct:  232 ARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGV-RLDAITFVAVLTACNHGG 394          
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 52/177 (29.38%), Postives = 82/177 (46.33%), Query Frame = 1
Query:  133 SKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAAC 663
            S +I+ Y  S   EL  A  LF  +   +   +  ++ G + +     A+  Y +ML    + +  T +  L AC++  AL   ++IH ++L +              +YAK GE+  A  VF  M  +DI SW A+I G A      +A+  F++M   G  KP+EV  L  L AC
Sbjct:  231 STLIKGYVDS--GELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE-KPDEVVFLAVLTAC 404          
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 49/174 (28.16%), Postives = 80/174 (45.98%), Query Frame = 1
Query:  160 SPLNELAYAHALFRQINAPSTN--DFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            S   ++  A  +F ++  P+ N   +  I+ G A       A     QM+    + DA      L AC     L   ++IHS + R               +YAK G +  A  VF+++  +D+ SWN ++ GL       EA++LF RM+ EG+ +P++VT +  L +C H G
Sbjct:  258 SKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI-RPDKVTFIAVLCSCNHAG 430          

HSP 2 Score: 68.5514 bits (166), Expect = 3.539e-11
Identity = 53/201 (26.37%), Postives = 89/201 (44.28%), Query Frame = 1
Query:   67 IKQLQAHLTTTGQFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVG--EIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAAC 663
            +KQL A +      +     +  K+I   ALS   +   A  +F Q+  P+ +  N+++R  A +S+P  A   + +M R    +D  T  F LKAC+    L     +H+H+ +                Y++ G   +  A K+F++M  RD  SWN+++ GL +     +A  LF  M    +   N  T+L   A C
Sbjct:   35 VKQLHAQIIRRNLHED--LHIAPKLIS--ALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWN--TMLDGYARC 229          
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP253_ARATH (Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 50/204 (24.51%), Postives = 93/204 (45.59%), Query Frame = 1
Query:   64 HIKQLQAHLTTTGQFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            HI Q+ A + +TG   +     R  I    +   + E++YA  +F ++     + +N+++   +    P   +  Y QM+    + D+ T +  +KAC   L L +   +    +                +Y K G++  A+ +F +M  RD+  W  ++ G AQ   + +AV+ ++ M+ EG F  + V +LG L A G LG
Sbjct:   32 HITQIHAFVISTGNLLNGSSISRDLIA---SCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG-FGRDRVVMLGLLQASGDLG 231          

HSP 2 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 47/164 (28.66%), Postives = 75/164 (45.73%), Query Frame = 1
Query:  184 AHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            A  LF ++       +  ++ G A + K   AV +YR+M       D +     L+A   +        +H ++ R               +YAKVG I  A +VF  M  +   SW +LI+G AQ  LA++A +    M+  G F+P+ VT++G L AC  +G
Sbjct:  170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLG-FQPDLVTLVGVLVACSQVG 332          
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP201_ARATH (Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 52/171 (30.41%), Postives = 81/171 (47.37%), Query Frame = 1
Query:  166 LNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQM-LRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            + ++  A  LF  +   +   +N ++ G   + +P   +  +++M    S   D +T    L A +   AL      H  V R               +Y+K GEI  AK++FDEM  + +ASWNA+I G A    A  A+DLF  M +E   KP+E+T+L  + AC H G
Sbjct:  220 IKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE--KPDEITMLAVITACNHGG 388          
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP191_ARATH (Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 61/222 (27.48%), Postives = 93/222 (41.89%), Query Frame = 1
Query:   40 VMSHFSH----IHIKQLQAHLTTTGQFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGS------HRSDALTCSFALKA---CARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACG 666
            ++ HF+     +H+ QL A +            + SK+I FY     +    A  +F +I   +   +NA+L          +A   +   +  S       R D+++ S  LKA   C          Q+H  V+R                Y K   I SA+KVFDEM  RD+ SWN++I+G +Q     +   ++K M     FKPN VTV+    ACG
Sbjct:   28 LIQHFTRHRLPLHVLQLHARIVVFSIKPDNF--LASKLISFYTRQ--DRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACG 245          

HSP 2 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 45/164 (27.44%), Postives = 80/164 (48.78%), Query Frame = 1
Query:  184 AHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            A ALF ++ +   + +NA++ GL  ++     +  +R+M+R   R + +T S  L +      L    +IH+  +R+               YAK+G ++ A++VFD    R + +W A+I   A    +  A  LF +M+  G  KP++VT+   L+A  H G
Sbjct:  319 AMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGT-KPDDVTLTAVLSAFAHSG 481          
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PPR57_ARATH (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 48/164 (29.27%), Postives = 79/164 (48.17%), Query Frame = 1
Query:  184 AHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            A  +F+++   +   +  ++ GLA +      +  +  M R          S A+K+CA + A     Q H+ +L+               +YAK G +  A++VF  M   D  SWNALIA L Q    +EAVD+++ M  +G+ +P+ +T+L  L AC H G
Sbjct:  370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI-RPDRITLLTVLTACSHAG 532          
BLAST of FC878063 vs. ExPASy Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 65/234 (27.78%), Postives = 93/234 (39.74%), Query Frame = 1
Query:   67 IKQLQAHLTTTGQFQSKLCPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIA-------------------------------GLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            IKQ+  H+   G  QS  C + +K+I       +    YA  +   +   +   + A++RG A   K   A+  Y  M +      + T S  LKAC  +  L    Q H+   R               +Y K   I  A+KVFDEM  RD+ SW  LIA                               G AQ     EA++ F RM+  G+ + +EVTV G ++AC  LG
Sbjct:   65 IKQIHGHVLRKGLDQS--CYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI-RADEVTVAGYISACAQLG 295          

HSP 2 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 49/177 (27.68%), Postives = 86/177 (48.59%), Query Frame = 1
Query:  154 ALSPLNELAYAHALFRQINAPSTNDFNAILRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLA---LFETLQIHSHVLRHXXXXXXXXXXXXXXVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLG 675
            A + +  +  A  LF  +       + A++ G A ++KP  A+ ++ +M +   R+D +T +  + ACA++ A       +QI +    +              +Y+K G +  A  VF  M  +++ +++++I GLA    A EA+ LF  M  +   KPN VT +GAL AC H G
Sbjct:  224 AYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI-AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSG 399          
The following BLAST results are available for this feature:
BLAST of FC878063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
PP431_ARATH7.618e-1426.73Pentatricopeptide repeat-containing protein At5g55... [more]
PP329_ARATH7.618e-1430.43Pentatricopeptide repeat-containing protein At4g20... [more]
PPR65_ARATH9.949e-1428.21Pentatricopeptide repeat-containing protein At1g31... [more]
PPR10_ARATH9.949e-1429.38Pentatricopeptide repeat-containing protein At1g04... [more]
PP261_ARATH9.949e-1428.16Pentatricopeptide repeat-containing protein At3g29... [more]
PP253_ARATH9.949e-1424.51Putative pentatricopeptide repeat-containing prote... [more]
PP201_ARATH9.949e-1430.41Pentatricopeptide repeat-containing protein At2g44... [more]
PP191_ARATH9.949e-1427.48Pentatricopeptide repeat-containing protein At2g37... [more]
PPR57_ARATH1.299e-1329.27Pentatricopeptide repeat-containing protein At1g25... [more]
PP417_ARATH1.299e-1327.78Pentatricopeptide repeat-containing protein At5g44... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ12YE14RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ12YE14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878063 ID=FC878063; Name=FC878063; organism=Citrus clementina; type=EST; length=676bp
AATGCGCTAATCTCAACGCACTGTTACAAAAATGCAGTAGTAATGTCCCA
TTTCTCTCACATTCACATAAAGCAACTACAAGCTCACCTTACTACCACCG
GCCAATTCCAATCCAAATTGTGCCCCGTTCGATCCAAAATCATCGAATTT
TACGCGCTTTCTCCTCTCAACGAGCTCGCTTACGCACACGCTTTGTTCCG
CCAAATCAACGCGCCTTCCACCAACGACTTTAACGCTATCCTCCGAGGCC
TCGCCCACTCTTCGAAACCCACGAACGCCGTCCTATGGTACCGCCAAATG
TTACGCGGGTCCCACAGGTCCGACGCGCTCACGTGCTCGTTTGCTCTCAA
AGCATGCGCGCGTGTCCTGGCTTTGTTTGAGACTTTACAGATTCATTCGC
ACGTTTTGCGTCATGGGTTCTTGGCTGATGCGTTGTTGGGTACTACTTTG
TTGGATGTCTATGCGAAAGTTGGCGAGATTGTAAGTGCTAAGAAGGTGTT
TGATGAAATGGGTGTGAGAGACATTGCGTCGTGGAATGCGTTGATTGCTG
GGTTGGCTCAGGGGAATTTGGCGAGTGAAGCAGTTGATTTGTTTAAGAGG
ATGAAAATGGAGGGTGTTTTTAAGCCTAATGAGGTTACGGTTCTGGGAGC
TTTGGCGGCGTGTGGTCATTTGGGTG
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