FC878073

Overview
NameFC878073
Unique NameFC878073
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 5.776e-48
Identity = 97/167 (58.08%), Postives = 120/167 (71.86%), Query Frame = 3
Query:  405 DWLGREMLEMRLRDQVDN----DEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            D L   M +MRLR+   +    +ED+D EP I++G G ETG VI TT+GGR+G  KQ +SY+A+ VVGTGSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQIM++ DHPN+V L+H FFSTTDK              TV R  ++Y++++Q MP I V+LYTY
Sbjct:   74 DQLPEVMNDMRLREDEPHANRGEEDKDMEPPIVNGCGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYLNLVLEFVPETVYRALKHYTKMNQHMPIILVQLYTY 240          
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 1.089e-46
Identity = 88/152 (57.89%), Postives = 113/152 (74.34%), Query Frame = 3
Query:  438 LRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            L+ + D D D++    +I+G  A TGH+I TTIGG+NG  KQ +SY+AE VVGTGSFG+VFQAKC ETGE VAIKKVLQD+RYKNRELQ+M+++DHPN+V+LKHCFFSTT +              T+ R+ ++Y+  +QRMP  YVKLYTY
Sbjct:   27 LKRRPDIDNDKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRLMDHPNVVSLKHCFFSTTTRDELFLNLVMEYVPETLYRVLKHYTSSNQRMPIFYVKLYTY 178          
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.140e-46
Identity = 87/152 (57.24%), Postives = 112/152 (73.68%), Query Frame = 3
Query:  438 LRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            L+ + + D D++    +I+G  A TGH+I TTIGG+NG  KQ +SY+AE VVGTGSFG+VFQAKC ETGE VAIKKVLQD+RYKNRELQ+M+ +DHPN+++LKHCFFSTT +              T+ R+ R+Y+  +QRMP  YVKLYTY
Sbjct:   25 LKRRPELDSDKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRPMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLRHYTSSNQRMPIFYVKLYTY 176          
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 3.504e-45
Identity = 84/144 (58.33%), Postives = 107/144 (74.31%), Query Frame = 3
Query:  462 EDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            +D++    ++DG    TGH+I TTIGG+NG  KQ +SY+AE VVGTGSFG+VFQAKC ETGE VAIKKVLQD+RYKNRELQ+M+++DHPN+V LKHCFFSTT K              ++ R+ ++YS  +QRMP +YVKLY Y
Sbjct:    3 DDKEMPAAVVDGHDQVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVVCLKHCFFSTTSKDELFLNLVMEYVPESLYRVLKHYSSANQRMPLVYVKLYMY 146          
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.599e-40
Identity = 83/150 (55.33%), Postives = 103/150 (68.67%), Query Frame = 3
Query:  444 DQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            D +  +   D +  II G G E+G +I T   G N    + +SY AEHV+GTGSFGVVFQAKC ET E VAIKKVLQDKRYKNRELQIM+MLDHPN+V LKH FFSTT+K              T+ R +R+Y++++Q MP IY++LYTY
Sbjct:   59 DHLPKEIREDMDCGIIKGNGTESGRIITTKKKGLNDQKDKTISYRAEHVIGTGSFGVVFQAKCLETEEKVAIKKVLQDKRYKNRELQIMRMLDHPNVVELKHSFFSTTEKDELYLNLVLEYVPETIYRASRSYTKMNQHMPLIYIQLYTY 208          
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: GSK3B_SPECI (Glycogen synthase kinase-3 beta OS=Spermophilus citellus GN=GSK3B PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  492 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            D  G++   V+ T   G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVLQDKR+KNRELQIM+ LDH NIV L++ F+S+ + K              TV R+AR+YSR  Q +P IYVKLY Y
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163          
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: GSK3B_RAT (Glycogen synthase kinase-3 beta OS=Rattus norvegicus GN=Gsk3b PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  492 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            D  G++   V+ T   G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVLQDKR+KNRELQIM+ LDH NIV L++ F+S+ + K              TV R+AR+YSR  Q +P IYVKLY Y
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163          
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: GSK3B_MOUSE (Glycogen synthase kinase-3 beta OS=Mus musculus GN=Gsk3b PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  492 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            D  G++   V+ T   G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVLQDKR+KNRELQIM+ LDH NIV L++ F+S+ + K              TV R+AR+YSR  Q +P IYVKLY Y
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163          
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: GSK3B_HUMAN (Glycogen synthase kinase-3 beta OS=Homo sapiens GN=GSK3B PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  492 DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            D  G++   V+ T   G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVLQDKR+KNRELQIM+ LDH NIV L++ F+S+ + K              TV R+AR+YSR  Q +P IYVKLY Y
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163          
BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: GSK3_CAEBR (Glycogen synthase kinase-3 OS=Caenorhabditis briggsae GN=gsk-3 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.060e-25
Identity = 62/111 (55.86%), Postives = 77/111 (69.37%), Query Frame = 3
Query:  564 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            ++SY  + V+G GSFGVVF AK   T E+VAIKKVLQDKR+KNRELQIM+ L+HPNIV LK+ F+S+ D K              TV R+AR+YS+  Q +P IYVKLY Y
Sbjct:   33 EISYYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDKRFKNRELQIMRKLNHPNIVKLKYFFYSSGDKKDELYLNLILEYVPETVYRVARHYSKQRQSIPMIYVKLYMY 143          
The following BLAST results are available for this feature:
BLAST of FC878073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
KSGT_BRANA5.776e-4858.08Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG6_ARATH1.089e-4657.89Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
KSG9_ARATH4.140e-4657.24Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG7_ARATH3.504e-4558.33Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG2_ARATH2.599e-4055.33Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
GSK3B_SPECI9.588e-2750.37Glycogen synthase kinase-3 beta OS=Spermophilus ci... [more]
GSK3B_RAT9.588e-2750.37Glycogen synthase kinase-3 beta OS=Rattus norvegic... [more]
GSK3B_MOUSE9.588e-2750.37Glycogen synthase kinase-3 beta OS=Mus musculus GN... [more]
GSK3B_HUMAN9.588e-2750.37Glycogen synthase kinase-3 beta OS=Homo sapiens GN... [more]
GSK3_CAEBR1.060e-2555.86Glycogen synthase kinase-3 OS=Caenorhabditis brigg... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA8CB12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA8CB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878073 ID=FC878073; Name=FC878073; organism=Citrus clementina; type=EST; length=893bp
CTTTCTCTCTCTCTTCAATCAACGAAACAGAACTAAAAAAGAACAAAATC
AAAATTAAAAAAATAAAACAGCAAAAATTAAAAGCAAAAAATCAGATCAG
CAAACAGTTTTCTACTTCTACCTGTTTTGTTTTAATTGCTTCGATTTTCA
TCTCATAAGCGTTCAAATTTTGTGAAGCTGAAAGCTGCAGAATGCGTGGA
ATTTGCTTCCACTTCTCGTTGAAGCGCTTCCAGATAGGTGTTTGGGTGGT
ACAGAAGGCACGACCTCAGAGCATCTGGAGGGTAGCGAATACTAGTATCT
GGAATACTCTCGAGTTTGTATAAATGGCATCTGCCAGCCTAGGGAATGGG
GGAGTGGGCAGTTCCAGGTCTGTTAACGGCTTCAAGAGTTCATCAAGTTC
GGTTGACTGGTTGGGGAGAGAAATGCTTGAAATGAGATTGCGGGACCAGG
TGGACAATGATGAAGACAGAGATAGTGAACCAGATATCATTGATGGTGTG
GGTGCTGAAACTGGACACGTCATACGAACAACGATTGGTGGTCGAAATGG
CAATTCTAAACAGAAAGTTAGTTATATAGCTGAGCATGTGGTTGGAACTG
GTTCTTTTGGTGTTGTCTTTCAAGCAAAATGTAGAGAAACTGGAGAGATT
GTTGCTATCAAGAAGGTTCTCCAAGACAAGCGCTATAAGAATAGGGAGTT
ACAGATTATGCAGATGTTGGACCATCCAAATATTGTTGCCCTTAAGCATT
GTTTCTTTTCAACAACAGACAAGGAAGAGCTTTACTTGAATCTTGTGCTT
GAATATGTTCCTGAAACCGTTAATCGAATTGCAAGGAACTACAGCAGAAT
CCACCAGCGGATGCCCTTTATATATGTTAAACTCTATACCTAT
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